RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ZBTB7BO15156 539 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-224ENST00000556737 MYO1BO43795 1136 aa12.82□□□□□ -0.36
SHMT2-224ENST00000556737 FRAT2O75474 233 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-224ENST00000556737 RBM5P52756 815 aaKnown RBP eCLIP12.82□□□□□ -0.36
SHMT2-224ENST00000556737 LBX1P52954 281 aa12.82□□□□□ -0.36
SHMT2-224ENST00000556737 HDLBPQ00341 1268 aaKnown RBP12.82□□□□□ -0.36
SHMT2-224ENST00000556737 TFCP2Q12800 502 aa12.82□□□□□ -0.36
SHMT2-224ENST00000556737 POLA2Q14181 598 aa12.82□□□□□ -0.36
SHMT2-224ENST00000556737 ITPRIPQ8IWB1 547 aa12.82□□□□□ -0.36
SHMT2-224ENST00000556737 CCDC102AQ96A19 550 aa12.82□□□□□ -0.36
SHMT2-224ENST00000556737 TDRD3Q9H7E2 651 aaKnown RBP12.82□□□□□ -0.36
SHMT2-224ENST00000556737 C1orf115Q9H7X2 142 aa12.82□□□□□ -0.36
SHMT2-224ENST00000556737 VEZTQ9HBM0 779 aa12.82□□□□□ -0.36
SHMT2-224ENST00000556737 ZNF70Q9UC06 446 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-224ENST00000556737 FZD1Q9UP38 647 aa12.82□□□□□ -0.36
SHMT2-224ENST00000556737 SUGT1Q9Y2Z0 365 aa12.82□□□□□ -0.36
SHMT2-224ENST00000556737 SALL1Q9NSC2 1324 aa12.82□□□□□ -0.36
SHMT2-224ENST00000556737 MAST2Q6P0Q8 1798 aa12.81□□□□□ -0.36
SHMT2-224ENST00000556737 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
SHMT2-224ENST00000556737 PRDX5P30044 214 aa12.81□□□□□ -0.36
SHMT2-224ENST00000556737 NF2P35240 595 aa12.81□□□□□ -0.36
SHMT2-224ENST00000556737 KIF23Q02241 960 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-224ENST00000556737 RASGRF1Q13972 1273 aa12.81□□□□□ -0.36
SHMT2-224ENST00000556737 CCDC102BQ68D86 513 aa12.81□□□□□ -0.36
SHMT2-224ENST00000556737 CDAN1Q8IWY9 1227 aa12.81□□□□□ -0.36
SHMT2-224ENST00000556737 PANK1Q8TE04 598 aa12.81□□□□□ -0.36
SHMT2-224ENST00000556737 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
SHMT2-224ENST00000556737 ZDHHC15Q96MV8 337 aa12.81□□□□□ -0.36
SHMT2-224ENST00000556737 MAST3O60307 1309 aa12.81□□□□□ -0.36
SHMT2-224ENST00000556737 PDS5AQ29RF7 1337 aaKnown RBP12.81□□□□□ -0.36
SHMT2-224ENST00000556737 AKAP11Q9UKA4 1901 aa12.8□□□□□ -0.36
SHMT2-224ENST00000556737 SEMA3EO15041 775 aa12.8□□□□□ -0.36
SHMT2-224ENST00000556737 RASA3Q14644 834 aa12.8□□□□□ -0.36
SHMT2-224ENST00000556737 MAP3K11Q16584 847 aa12.8□□□□□ -0.36
SHMT2-224ENST00000556737 LDLRAD1Q5T700 205 aa12.8□□□□□ -0.36
SHMT2-224ENST00000556737 NBPF12Q5TAG4 269 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-224ENST00000556737 TNS4Q8IZW8 715 aa12.8□□□□□ -0.36
SHMT2-224ENST00000556737 WDR66Q8TBY9 1149 aa12.8□□□□□ -0.36
SHMT2-224ENST00000556737 TEKT1Q969V4 418 aa12.8□□□□□ -0.36
SHMT2-224ENST00000556737 TEPSINQ96N21 525 aa12.8□□□□□ -0.36
SHMT2-224ENST00000556737 TSKSQ9UJT2 592 aa12.8□□□□□ -0.36
SHMT2-224ENST00000556737 CA12O43570 354 aa12.79□□□□□ -0.36
SHMT2-224ENST00000556737 TIMM10P62072 90 aa12.79□□□□□ -0.36
SHMT2-224ENST00000556737 ATP8B2P98198 1209 aa12.79□□□□□ -0.36
SHMT2-224ENST00000556737 PRKG1Q13976 671 aa12.79□□□□□ -0.36
SHMT2-224ENST00000556737 TTLL12Q14166 644 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-224ENST00000556737 APOBEC3HQ6NTF7 200 aaKnown RBP12.79□□□□□ -0.36
SHMT2-224ENST00000556737 ARMC9Q7Z3E5 817 aa12.79□□□□□ -0.36
SHMT2-224ENST00000556737 XAGE2Q96GT9 111 aa12.79□□□□□ -0.36
SHMT2-224ENST00000556737 MRIQ9BWK5 157 aa12.79□□□□□ -0.36
SHMT2-224ENST00000556737 ANGEL1Q9UNK9 670 aaKnown RBP12.79□□□□□ -0.36
SHMT2-224ENST00000556737 MYH2Q9UKX2 1941 aa12.79□□□□□ -0.36
SHMT2-224ENST00000556737 RFX7Q2KHR2 1363 aa12.79□□□□□ -0.36
SHMT2-224ENST00000556737 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
SHMT2-224ENST00000556737 CACNB3P54284 484 aa12.78□□□□□ -0.36
SHMT2-224ENST00000556737 TNFAIP1Q13829 316 aa12.78□□□□□ -0.36
SHMT2-224ENST00000556737 MVPQ14764 893 aaKnown RBP12.78□□□□□ -0.36
SHMT2-224ENST00000556737 DIXDC1Q155Q3 683 aa12.78□□□□□ -0.36
SHMT2-224ENST00000556737 CEP85Q6P2H3 762 aa12.78□□□□□ -0.36
SHMT2-224ENST00000556737 HHIPL2Q6UWX4 724 aa12.78□□□□□ -0.36
SHMT2-224ENST00000556737 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
SHMT2-224ENST00000556737 GNL3LQ9NVN8 582 aaKnown RBP12.78□□□□□ -0.36
SHMT2-224ENST00000556737 DENND2AQ9ULE3 1009 aa12.78□□□□□ -0.36
SHMT2-224ENST00000556737 AKAP2Q9Y2D5 859 aa12.78□□□□□ -0.36
SHMT2-224ENST00000556737 DAGLAQ9Y4D2 1042 aa12.78□□□□□ -0.36
SHMT2-224ENST00000556737 DOCK2Q92608 1830 aa12.78□□□□□ -0.36
SHMT2-224ENST00000556737 RPAP1Q9BWH6 1393 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-224ENST00000556737 CLMNQ96JQ2 1002 aa12.77□□□□□ -0.37
SHMT2-224ENST00000556737 CSRNP1Q96S65 589 aa12.77□□□□□ -0.37
SHMT2-224ENST00000556737 TMEM39BQ9GZU3 492 aa12.77□□□□□ -0.37
SHMT2-224ENST00000556737 SAGE1Q9NXZ1 904 aa12.77□□□□□ -0.37
SHMT2-224ENST00000556737 USP2O75604 605 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-224ENST00000556737 ARID4AP29374 1257 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-224ENST00000556737 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.378e-8■■■□□ 16.6
SHMT2-224ENST00000556737 SUPT20HL1Q3ZLR7 823 aa12.76□□□□□ -0.37
SHMT2-224ENST00000556737 PI16Q6UXB8 463 aa12.76□□□□□ -0.37
SHMT2-224ENST00000556737 ZNF384Q8TF68 577 aa12.76□□□□□ -0.37
SHMT2-224ENST00000556737 RNF186Q9NXI6 227 aa12.76□□□□□ -0.37
SHMT2-224ENST00000556737 RCAN3Q9UKA8 241 aa12.76□□□□□ -0.37
SHMT2-224ENST00000556737 NOP58Q9Y2X3 529 aaKnown RBP12.76□□□□□ -0.37
SHMT2-224ENST00000556737 GAKO14976 1311 aa12.76□□□□□ -0.37
SHMT2-224ENST00000556737 PPP1R12BO60237 982 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-224ENST00000556737 LDHBP07195 334 aaKnown RBP12.75□□□□□ -0.37
SHMT2-224ENST00000556737 TNNI3KQ59H18 835 aa12.75□□□□□ -0.37
SHMT2-224ENST00000556737 FKBP1CQ5VVH2 108 aa12.75□□□□□ -0.37
SHMT2-224ENST00000556737 SPRYD7Q5W111 196 aa12.75□□□□□ -0.37
SHMT2-224ENST00000556737 FAM83AQ86UY5 434 aa12.75□□□□□ -0.37
SHMT2-224ENST00000556737 GPR108Q9NPR9 543 aa12.75□□□□□ -0.37
SHMT2-224ENST00000556737 HMG20BQ9P0W2 317 aa12.75□□□□□ -0.37
SHMT2-224ENST00000556737 CASP8AP2Q9UKL3 1982 aa12.75□□□□□ -0.37
SHMT2-224ENST00000556737 FPGT-TNNI3KV9GXZ4 949 aa12.75□□□□□ -0.37
SHMT2-224ENST00000556737 MYO5AQ9Y4I1 1855 aaKnown RBP12.74□□□□□ -0.37
SHMT2-224ENST00000556737 ATRNL1Q5VV63 1379 aa12.74□□□□□ -0.37
SHMT2-224ENST00000556737 UNCXA6NJT0 531 aa12.74□□□□□ -0.37
SHMT2-224ENST00000556737 GJA5P36382 358 aa12.74□□□□□ -0.37
SHMT2-224ENST00000556737 MCAMP43121 646 aa12.74□□□□□ -0.37
SHMT2-224ENST00000556737 TNNI2P48788 182 aa12.74□□□□□ -0.37
SHMT2-224ENST00000556737 MKRN3Q13064 507 aaKnown RBP12.74□□□□□ -0.37
SHMT2-224ENST00000556737 CDC42EP5Q6NZY7 148 aa12.74□□□□□ -0.37
SHMT2-224ENST00000556737 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms