RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PTPRCP08575 1304 aa16.72■□□□□ 0.27
TGFB3-204ENST00000556285 FKTNO75072 461 aa16.72■□□□□ 0.27
TGFB3-204ENST00000556285 USP2O75604 605 aaPredicted RBP16.72■□□□□ 0.27
TGFB3-204ENST00000556285 SREBF2Q12772 1141 aa16.72■□□□□ 0.27
TGFB3-204ENST00000556285 SPDYE2Q495Y8 402 aa16.72■□□□□ 0.27
TGFB3-204ENST00000556285 NOM1Q5C9Z4 860 aaKnown RBP16.72■□□□□ 0.27
TGFB3-204ENST00000556285 METTL24Q5JXM2 366 aa16.72■□□□□ 0.27
TGFB3-204ENST00000556285 IFNL1Q8IU54 200 aa16.72■□□□□ 0.27
TGFB3-204ENST00000556285 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.27
TGFB3-204ENST00000556285 SUPT20HL1Q3ZLR7 823 aa16.71■□□□□ 0.27
TGFB3-204ENST00000556285 FBXO46Q6PJ61 603 aaPredicted RBP16.71■□□□□ 0.27
TGFB3-204ENST00000556285 DZIP1LQ8IYY4 767 aaKnown RBP16.71■□□□□ 0.27
TGFB3-204ENST00000556285 CNKSR2Q8WXI2 1034 aa16.71■□□□□ 0.27
TGFB3-204ENST00000556285 PTPN18Q99952 460 aa16.71■□□□□ 0.27
TGFB3-204ENST00000556285 SERPINA10Q9UK55 444 aa16.71■□□□□ 0.27
TGFB3-204ENST00000556285 TCP10L2B9ZVM9 353 aa16.7■□□□□ 0.26
TGFB3-204ENST00000556285 PPP1R12BO60237 982 aaPredicted RBP16.7■□□□□ 0.26
TGFB3-204ENST00000556285 PDE8BO95263 885 aa16.7■□□□□ 0.26
TGFB3-204ENST00000556285 CRKP46108 304 aa16.7■□□□□ 0.26
TGFB3-204ENST00000556285 BCAMP50895 628 aa16.7■□□□□ 0.26
TGFB3-204ENST00000556285 PKN2Q16513 984 aaKnown RBP16.7■□□□□ 0.26
TGFB3-204ENST00000556285 TEPSINQ96N21 525 aa16.7■□□□□ 0.26
TGFB3-204ENST00000556285 RFX5P48382 616 aaPredicted RBP16.69■□□□□ 0.26
TGFB3-204ENST00000556285 OTOP1Q7RTM1 612 aa16.69■□□□□ 0.26
TGFB3-204ENST00000556285 VPS37DQ86XT2 251 aa16.69■□□□□ 0.26
TGFB3-204ENST00000556285 TMEM39BQ9GZU3 492 aa16.69■□□□□ 0.26
TGFB3-204ENST00000556285 POTEFA5A3E0 1075 aa16.68■□□□□ 0.26
TGFB3-204ENST00000556285 MANSC4A6NHS7 340 aaPredicted RBP16.68■□□□□ 0.26
TGFB3-204ENST00000556285 CACNB3P54284 484 aa16.68■□□□□ 0.26
TGFB3-204ENST00000556285 TRMT2AQ8IZ69 625 aaKnown RBP16.68■□□□□ 0.26
TGFB3-204ENST00000556285 CD99L2Q8TCZ2 262 aa16.68■□□□□ 0.26
TGFB3-204ENST00000556285 ZBTB48P10074 688 aaPredicted RBP16.67■□□□□ 0.26
TGFB3-204ENST00000556285 FGFR2P21802 821 aa16.67■□□□□ 0.26
TGFB3-204ENST00000556285 IREB2P48200 963 aaKnown RBP16.67■□□□□ 0.26
TGFB3-204ENST00000556285 CRHR2Q13324 411 aa16.67■□□□□ 0.26
TGFB3-204ENST00000556285 CAVIN4Q5BKX8 364 aa16.67■□□□□ 0.26
TGFB3-204ENST00000556285 ELP3Q9H9T3 547 aa16.67■□□□□ 0.26
TGFB3-204ENST00000556285 SMC4Q9NTJ3 1288 aa16.67■□□□□ 0.26
TGFB3-204ENST00000556285 TRIM17Q9Y577 477 aa16.67■□□□□ 0.26
TGFB3-204ENST00000556285 FRAT2O75474 233 aaPredicted RBP16.66■□□□□ 0.26
TGFB3-204ENST00000556285 ALDH1L2Q3SY69 923 aa16.66■□□□□ 0.26
TGFB3-204ENST00000556285 PRPF38BQ5VTL8 546 aaKnown RBP16.66■□□□□ 0.26
TGFB3-204ENST00000556285 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
TGFB3-204ENST00000556285 ATG9AQ7Z3C6 839 aa16.66■□□□□ 0.26
TGFB3-204ENST00000556285 ANKRD13AQ8IZ07 590 aa16.66■□□□□ 0.26
TGFB3-204ENST00000556285 EYA2O00167 538 aa16.65■□□□□ 0.26
TGFB3-204ENST00000556285 INHBEP58166 350 aa16.65■□□□□ 0.26
TGFB3-204ENST00000556285 TNFAIP1Q13829 316 aa16.65■□□□□ 0.26
TGFB3-204ENST00000556285 PUM3Q15397 648 aaKnown RBP16.65■□□□□ 0.26
TGFB3-204ENST00000556285 OPTNQ96CV9 577 aa16.65■□□□□ 0.26
TGFB3-204ENST00000556285 MS4A4AQ96JQ5 239 aa16.65■□□□□ 0.26
TGFB3-204ENST00000556285 KIAA0100Q14667 2235 aaKnown RBP16.64■□□□□ 0.25
TGFB3-204ENST00000556285 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
TGFB3-204ENST00000556285 UNCXA6NJT0 531 aa16.64■□□□□ 0.25
TGFB3-204ENST00000556285 ALDH1A1P00352 501 aa16.64■□□□□ 0.25
TGFB3-204ENST00000556285 HDLBPQ00341 1268 aaKnown RBP16.64■□□□□ 0.25
TGFB3-204ENST00000556285 TBC1D22AQ8WUA7 517 aa16.64■□□□□ 0.25
TGFB3-204ENST00000556285 NOB1Q9ULX3 412 aaKnown RBP16.64■□□□□ 0.25
TGFB3-204ENST00000556285 AK9Q5TCS8 1911 aa16.64■□□□□ 0.25
TGFB3-204ENST00000556285 IFIT1P09914 478 aaKnown RBP16.63■□□□□ 0.25
TGFB3-204ENST00000556285 VGLL4Q14135 290 aa16.63■□□□□ 0.25
TGFB3-204ENST00000556285 APOBEC3HQ6NTF7 200 aaKnown RBP16.63■□□□□ 0.25
TGFB3-204ENST00000556285 BRI3BPQ8WY22 251 aa16.63■□□□□ 0.25
TGFB3-204ENST00000556285 TEKT1Q969V4 418 aa16.63■□□□□ 0.25
TGFB3-204ENST00000556285 ZDHHC15Q96MV8 337 aa16.63■□□□□ 0.25
TGFB3-204ENST00000556285 SIL1Q9H173 461 aa16.63■□□□□ 0.25
TGFB3-204ENST00000556285 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.62■□□□□ 0.25
TGFB3-204ENST00000556285 PTPN22Q9Y2R2 807 aa16.62■□□□□ 0.25
TGFB3-204ENST00000556285 KIF16BQ96L93 1317 aa16.62■□□□□ 0.25
TGFB3-204ENST00000556285 UBTFL1P0CB47 393 aaPredicted RBP16.61■□□□□ 0.25
TGFB3-204ENST00000556285 SLC5A1P13866 664 aa16.61■□□□□ 0.25
TGFB3-204ENST00000556285 TNNI2P48788 182 aa16.61■□□□□ 0.25
TGFB3-204ENST00000556285 MAP3K9P80192 1104 aa16.61■□□□□ 0.25
TGFB3-204ENST00000556285 FAM43AQ8N2R8 423 aa16.61■□□□□ 0.25
TGFB3-204ENST00000556285 LPIN2Q92539 896 aa16.61■□□□□ 0.25
TGFB3-204ENST00000556285 PA2G4Q9UQ80 394 aaKnown RBP16.61■□□□□ 0.25
TGFB3-204ENST00000556285 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
TGFB3-204ENST00000556285 OTUD5Q96G74 571 aa16.6■□□□□ 0.25
TGFB3-204ENST00000556285 MRIQ9BWK5 157 aa16.6■□□□□ 0.25
TGFB3-204ENST00000556285 MGAMO43451 1857 aa16.59■□□□□ 0.25
TGFB3-204ENST00000556285 MYH2Q9UKX2 1941 aa16.59■□□□□ 0.25
TGFB3-204ENST00000556285 EN2P19622 333 aaPredicted RBP16.59■□□□□ 0.25
TGFB3-204ENST00000556285 DIXDC1Q155Q3 683 aa16.59■□□□□ 0.25
TGFB3-204ENST00000556285 MEIS3Q99687 375 aa16.59■□□□□ 0.25
TGFB3-204ENST00000556285 SNCAIPQ9Y6H5 919 aa16.59■□□□□ 0.25
TGFB3-204ENST00000556285 DOCK2Q92608 1830 aa16.59■□□□□ 0.25
TGFB3-204ENST00000556285 CCL15-CCL14A0A0B4J2E2 113 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 CIAO1O76071 339 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 PRDX5P30044 214 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 SP3Q02447 781 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 CCL15Q16663 113 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 ATP2B3Q16720 1220 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 HHIPL2Q6UWX4 724 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 WDR66Q8TBY9 1149 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 ZKSCAN4Q969J2 545 aaPredicted RBP16.58■□□□□ 0.24
TGFB3-204ENST00000556285 ERO1AQ96HE7 468 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 ARHGAP39Q9C0H5 1083 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 SUGT1Q9Y2Z0 365 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 DAGLAQ9Y4D2 1042 aa16.58■□□□□ 0.24
TGFB3-204ENST00000556285 PTPRFP10586 1907 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms