RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 MUC3BQ9H195 1237 aa6.98□□□□□ -1.29
KTN1-222ENST00000555506 NLRP2Q9NX02 1062 aa6.98□□□□□ -1.29
KTN1-222ENST00000555506 EIF4BP23588 611 aaKnown RBP6.98□□□□□ -1.29
KTN1-222ENST00000555506 ERCC5P28715 1186 aaPredicted RBP6.98□□□□□ -1.29
KTN1-222ENST00000555506 TXNRD3Q86VQ6 643 aa6.98□□□□□ -1.29
KTN1-222ENST00000555506 EPS8L3Q8TE67 593 aaKnown RBP6.98□□□□□ -1.29
KTN1-222ENST00000555506 CARD10Q9BWT7 1032 aa6.98□□□□□ -1.29
KTN1-222ENST00000555506 SRA1Q9HD15 236 aaKnown RBP6.98□□□□□ -1.29
KTN1-222ENST00000555506 FSCN2O14926 492 aa6.97□□□□□ -1.29
KTN1-222ENST00000555506 CTSHP09668 335 aa6.97□□□□□ -1.29
KTN1-222ENST00000555506 C9orf131Q5VYM1 1079 aa6.97□□□□□ -1.29
KTN1-222ENST00000555506 PI16Q6UXB8 463 aa6.97□□□□□ -1.29
KTN1-222ENST00000555506 METTL16Q86W50 562 aaKnown RBP6.97□□□□□ -1.29
KTN1-222ENST00000555506 MAP4K3Q8IVH8 894 aa6.97□□□□□ -1.29
KTN1-222ENST00000555506 GALNT12Q8IXK2 581 aa6.97□□□□□ -1.29
KTN1-222ENST00000555506 C12orf49Q9H741 205 aa6.97□□□□□ -1.29
KTN1-222ENST00000555506 NPHS2Q9NP85 383 aa6.97□□□□□ -1.29
KTN1-222ENST00000555506 SOX13Q9UN79 622 aa6.97□□□□□ -1.29
KTN1-222ENST00000555506 RNF114Q9Y508 228 aa6.97□□□□□ -1.29
KTN1-222ENST00000555506 NOS3P29474 1203 aa6.96□□□□□ -1.3
KTN1-222ENST00000555506 ZNF76P36508 570 aa6.96□□□□□ -1.3
KTN1-222ENST00000555506 IREB2P48200 963 aaKnown RBP6.96□□□□□ -1.3
KTN1-222ENST00000555506 WFDC12Q8WWY7 111 aa6.96□□□□□ -1.3
KTN1-222ENST00000555506 RNF34Q969K3 372 aa6.96□□□□□ -1.3
KTN1-222ENST00000555506 OSBPL7Q9BZF2 842 aa6.96□□□□□ -1.3
KTN1-222ENST00000555506 KCNK4Q9NYG8 393 aa6.96□□□□□ -1.3
KTN1-222ENST00000555506 A0A1W2PP55 124 aa6.95□□□□□ -1.3
KTN1-222ENST00000555506 METTL12A8MUP2 240 aa6.95□□□□□ -1.3
KTN1-222ENST00000555506 H3BRJ5 948 aa6.95□□□□□ -1.3
KTN1-222ENST00000555506 ALX3O95076 343 aa6.95□□□□□ -1.3
KTN1-222ENST00000555506 NT5DC4Q86YG4 428 aa6.95□□□□□ -1.3
KTN1-222ENST00000555506 ASAP3Q8TDY4 903 aa6.95□□□□□ -1.3
KTN1-222ENST00000555506 KLHDC7BQ96G42 594 aa6.95□□□□□ -1.3
KTN1-222ENST00000555506 SRCIN1Q9C0H9 1055 aa6.95□□□□□ -1.3
KTN1-222ENST00000555506 BHLHE41Q9C0J9 482 aaPredicted RBP6.95□□□□□ -1.3
KTN1-222ENST00000555506 USP35Q9P2H5 1018 aa6.95□□□□□ -1.3
KTN1-222ENST00000555506 FAM177BA6PVY3 158 aa6.94□□□□□ -1.3
KTN1-222ENST00000555506 DDX3YO15523 660 aaKnown RBP6.94□□□□□ -1.3
KTN1-222ENST00000555506 WISP1O95388 367 aa6.94□□□□□ -1.3
KTN1-222ENST00000555506 CD68P34810 354 aaPredicted RBP6.94□□□□□ -1.3
KTN1-222ENST00000555506 RAD51AP2Q09MP3 1159 aa6.94□□□□□ -1.3
KTN1-222ENST00000555506 HGSNATQ68CP4 663 aa6.94□□□□□ -1.3
KTN1-222ENST00000555506 VN1R5Q7Z5H4 357 aa6.94□□□□□ -1.3
KTN1-222ENST00000555506 BSNDQ8WZ55 320 aa6.94□□□□□ -1.3
KTN1-222ENST00000555506 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
KTN1-222ENST00000555506 MRPL18Q9H0U6 180 aaKnown RBP6.94□□□□□ -1.3
KTN1-222ENST00000555506 SEC31BQ9NQW1 1179 aa6.94□□□□□ -1.3
KTN1-222ENST00000555506 FAM8A1Q9UBU6 413 aa6.94□□□□□ -1.3
KTN1-222ENST00000555506 RNF112Q9ULX5 631 aa6.94□□□□□ -1.3
KTN1-222ENST00000555506 ADAM11O75078 769 aa6.93□□□□□ -1.3
KTN1-222ENST00000555506 CABP4P57796 275 aa6.93□□□□□ -1.3
KTN1-222ENST00000555506 FAM117BQ6P1L5 589 aa6.93□□□□□ -1.3
KTN1-222ENST00000555506 AGGF1Q8N302 714 aaeCLIP6.93□□□□□ -1.3
KTN1-222ENST00000555506 TMEM130Q8N3G9 435 aa6.93□□□□□ -1.3
KTN1-222ENST00000555506 TCF12Q99081 682 aa6.93□□□□□ -1.3
KTN1-222ENST00000555506 PCMTD2Q9NV79 361 aa6.93□□□□□ -1.3
KTN1-222ENST00000555506 F8W735 103 aaPredicted RBP6.92□□□□□ -1.3
KTN1-222ENST00000555506 GADD45BO75293 160 aaPredicted RBP6.92□□□□□ -1.3
KTN1-222ENST00000555506 PIP4K2BP78356 416 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 NAALADL2Q58DX5 795 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 NXPE4Q6UWF7 544 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 CCNJLQ8IV13 435 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 KLHL23Q8NBE8 558 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 SLC7A3Q8WY07 619 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 MEGF10Q96KG7 1140 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 BCO2Q9BYV7 579 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 TGIF2Q9GZN2 237 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 LIN7BQ9HAP6 207 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 USP31Q70CQ4 1352 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 SOX1O00570 391 aaPredicted RBP6.92□□□□□ -1.3
KTN1-222ENST00000555506 USP17L7P0C7H9 530 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 GRIA4P48058 902 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 GRM2Q14416 872 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 KIAA0319Q5VV43 1072 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.92□□□□□ -1.3
KTN1-222ENST00000555506 DCAF11Q8TEB1 546 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 WNT8BQ93098 351 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 TP53INP1Q96A56 240 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 AKTIPQ9H8T0 292 aa6.92□□□□□ -1.3
KTN1-222ENST00000555506 ST13P50502 369 aaKnown RBP6.91□□□□□ -1.3
KTN1-222ENST00000555506 IKBKEQ14164 716 aa6.91□□□□□ -1.3
KTN1-222ENST00000555506 TAF1CQ15572 869 aaPredicted RBP6.91□□□□□ -1.3
KTN1-222ENST00000555506 SPRED3Q2MJR0 410 aa6.91□□□□□ -1.3
KTN1-222ENST00000555506 SREK1Q8WXA9 508 aaKnown RBP6.91□□□□□ -1.3
KTN1-222ENST00000555506 OSGEPQ9NPF4 335 aa6.91□□□□□ -1.3
KTN1-222ENST00000555506 A0A096LPE4 126 aa6.9□□□□□ -1.31
KTN1-222ENST00000555506 A0A1W2PPZ6 126 aa6.9□□□□□ -1.31
KTN1-222ENST00000555506 NLRP12P59046 1061 aa6.9□□□□□ -1.31
KTN1-222ENST00000555506 MEI1Q5TIA1 1274 aa6.9□□□□□ -1.31
KTN1-222ENST00000555506 ACAD11Q709F0 780 aa6.9□□□□□ -1.31
KTN1-222ENST00000555506 UBASH3BQ8TF42 649 aa6.9□□□□□ -1.31
KTN1-222ENST00000555506 DRC1Q96MC2 740 aa6.9□□□□□ -1.31
KTN1-222ENST00000555506 EHD4Q9H223 541 aa6.9□□□□□ -1.31
KTN1-222ENST00000555506 TRAK1Q9UPV9 953 aa6.9□□□□□ -1.31
KTN1-222ENST00000555506 ESRRAP11474 423 aaPredicted RBP6.89□□□□□ -1.31
KTN1-222ENST00000555506 TAL1P17542 331 aaPredicted RBP6.89□□□□□ -1.31
KTN1-222ENST00000555506 GSTT1P30711 240 aa6.89□□□□□ -1.31
KTN1-222ENST00000555506 C19orf57Q0VDD7 668 aa6.89□□□□□ -1.31
KTN1-222ENST00000555506 DUOXA2Q1HG44 320 aa6.89□□□□□ -1.31
KTN1-222ENST00000555506 Q6ZS46 218 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms