RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 APBB1O00213 710 aa14.86□□□□□ -0.03
SRP54-206ENST00000555317 UQCRFS1P1P0C7P4 283 aa14.86□□□□□ -0.03
SRP54-206ENST00000555317 HDLBPQ00341 1268 aaKnown RBP14.86□□□□□ -0.03
SRP54-206ENST00000555317 TNFAIP1Q13829 316 aa14.86□□□□□ -0.03
SRP54-206ENST00000555317 DEFB115Q30KQ5 88 aa14.86□□□□□ -0.03
SRP54-206ENST00000555317 CST9Q5W186 159 aa14.86□□□□□ -0.03
SRP54-206ENST00000555317 SPTY2D1Q68D10 685 aaPredicted RBP14.86□□□□□ -0.03
SRP54-206ENST00000555317 ZBED3Q96IU2 234 aaPredicted RBP14.86□□□□□ -0.03
SRP54-206ENST00000555317 GBA2Q9HCG7 927 aaPredicted RBP14.86□□□□□ -0.03
SRP54-206ENST00000555317 TMOD2Q9NZR1 351 aa14.86□□□□□ -0.03
SRP54-206ENST00000555317 SCAF8Q9UPN6 1271 aaKnown RBP14.86□□□□□ -0.03
SRP54-206ENST00000555317 PDS5AQ29RF7 1337 aaKnown RBP14.86□□□□□ -0.03
SRP54-206ENST00000555317 CLRN2A0PK11 232 aa14.85□□□□□ -0.03
SRP54-206ENST00000555317 RASSF10A6NK89 507 aa14.85□□□□□ -0.03
SRP54-206ENST00000555317 ECE1P42892 770 aa14.85□□□□□ -0.03
SRP54-206ENST00000555317 GRM1Q13255 1194 aa14.85□□□□□ -0.03
SRP54-206ENST00000555317 TTLL12Q14166 644 aaPredicted RBP14.85□□□□□ -0.03
SRP54-206ENST00000555317 DLK2Q6UY11 383 aa14.85□□□□□ -0.03
SRP54-206ENST00000555317 DZIP1Q86YF9 867 aaKnown RBP14.85□□□□□ -0.03
SRP54-206ENST00000555317 PRMT6Q96LA8 375 aaPredicted RBP14.85□□□□□ -0.03
SRP54-206ENST00000555317 BCL11AQ9H165 835 aa14.85□□□□□ -0.03
SRP54-206ENST00000555317 ABCF2Q9UG63 623 aa14.85□□□□□ -0.03
SRP54-206ENST00000555317 TLL2Q9Y6L7 1015 aa14.85□□□□□ -0.03
SRP54-206ENST00000555317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.85□□□□□ -0.03
SRP54-206ENST00000555317 SALL1Q9NSC2 1324 aa14.85□□□□□ -0.03
SRP54-206ENST00000555317 RAB11FIP3O75154 756 aa14.84□□□□□ -0.03
SRP54-206ENST00000555317 ARID4AP29374 1257 aaPredicted RBP14.84□□□□□ -0.03
SRP54-206ENST00000555317 HUNKP57058 714 aa14.84□□□□□ -0.03
SRP54-206ENST00000555317 GRIK5Q16478 980 aa14.84□□□□□ -0.03
SRP54-206ENST00000555317 AACSQ86V21 672 aa14.84□□□□□ -0.03
SRP54-206ENST00000555317 SLF2Q8IX21 1173 aa14.84□□□□□ -0.03
SRP54-206ENST00000555317 SPATA5Q8NB90 893 aa14.84□□□□□ -0.03
SRP54-206ENST00000555317 KIF1BPQ96EK5 621 aa14.84□□□□□ -0.03
SRP54-206ENST00000555317 DBNDD2Q9BQY9 259 aa14.84□□□□□ -0.03
SRP54-206ENST00000555317 PCDHAC2Q9Y5I4 1007 aa14.84□□□□□ -0.03
SRP54-206ENST00000555317 PPP2R3BQ9Y5P8 575 aa14.84□□□□□ -0.03
SRP54-206ENST00000555317 ZBTB22O15209 634 aa14.83□□□□□ -0.04
SRP54-206ENST00000555317 PRDX5P30044 214 aa14.83□□□□□ -0.04
SRP54-206ENST00000555317 TNNI2P48788 182 aa14.83□□□□□ -0.04
SRP54-206ENST00000555317 SPDYE2Q495Y8 402 aa14.83□□□□□ -0.04
SRP54-206ENST00000555317 HHIPL2Q6UWX4 724 aa14.83□□□□□ -0.04
SRP54-206ENST00000555317 SAPCD2Q86UD0 394 aa14.83□□□□□ -0.04
SRP54-206ENST00000555317 CLASRPQ8N2M8 674 aaKnown RBP14.83□□□□□ -0.04
SRP54-206ENST00000555317 RHPN1Q8TCX5 695 aa14.83□□□□□ -0.04
SRP54-206ENST00000555317 ZDHHC15Q96MV8 337 aa14.83□□□□□ -0.04
SRP54-206ENST00000555317 MRIQ9BWK5 157 aa14.83□□□□□ -0.04
SRP54-206ENST00000555317 DEFB129Q9H1M3 183 aa14.83□□□□□ -0.04
SRP54-206ENST00000555317 TDRD3Q9H7E2 651 aaKnown RBP14.83□□□□□ -0.04
SRP54-206ENST00000555317 ZNF70Q9UC06 446 aaPredicted RBP14.83□□□□□ -0.04
SRP54-206ENST00000555317 PAPPA2Q9BXP8 1791 aa14.83□□□□□ -0.04
SRP54-206ENST00000555317 MYH2Q9UKX2 1941 aa14.82□□□□□ -0.04
SRP54-206ENST00000555317 VEGFBP49765 207 aa14.82□□□□□ -0.04
SRP54-206ENST00000555317 FKBP1BP68106 108 aa14.82□□□□□ -0.04
SRP54-206ENST00000555317 PRAMEF18Q5VWM3 479 aa14.82□□□□□ -0.04
SRP54-206ENST00000555317 ERICH6Q7L0X2 663 aa14.82□□□□□ -0.04
SRP54-206ENST00000555317 SIRT2Q8IXJ6 389 aa14.82□□□□□ -0.04
SRP54-206ENST00000555317 CCDC8Q9H0W5 538 aaPredicted RBP14.82□□□□□ -0.04
SRP54-206ENST00000555317 IL1RAPL2Q9NP60 686 aa14.82□□□□□ -0.04
SRP54-206ENST00000555317 HMG20BQ9P0W2 317 aa14.82□□□□□ -0.04
SRP54-206ENST00000555317 IFIT2P09913 472 aaKnown RBP14.81□□□□□ -0.04
SRP54-206ENST00000555317 MCAMP43121 646 aa14.81□□□□□ -0.04
SRP54-206ENST00000555317 GSTO1P78417 241 aa14.81□□□□□ -0.04
SRP54-206ENST00000555317 DIXDC1Q155Q3 683 aa14.81□□□□□ -0.04
SRP54-206ENST00000555317 SUPT20HL1Q3ZLR7 823 aa14.81□□□□□ -0.04
SRP54-206ENST00000555317 EAF2Q96CJ1 260 aaPredicted RBP14.81□□□□□ -0.04
SRP54-206ENST00000555317 HHIPL1Q96JK4 782 aa14.81□□□□□ -0.04
SRP54-206ENST00000555317 CAPNS2Q96L46 248 aa14.81□□□□□ -0.04
SRP54-206ENST00000555317 RAI14Q9P0K7 980 aa14.81□□□□□ -0.04
SRP54-206ENST00000555317 DBNLQ9UJU6 430 aaKnown RBP14.81□□□□□ -0.04
SRP54-206ENST00000555317 WDR33Q9C0J8 1336 aaKnown RBP14.81□□□□□ -0.04
SRP54-206ENST00000555317 TCP10L2B9ZVM9 353 aa14.8□□□□□ -0.04
SRP54-206ENST00000555317 CYP4F22Q6NT55 531 aa14.8□□□□□ -0.04
SRP54-206ENST00000555317 PI16Q6UXB8 463 aa14.8□□□□□ -0.04
SRP54-206ENST00000555317 ARMC9Q7Z3E5 817 aa14.8□□□□□ -0.04
SRP54-206ENST00000555317 JMYQ8N9B5 988 aa14.8□□□□□ -0.04
SRP54-206ENST00000555317 CRBNQ96SW2 442 aa14.8□□□□□ -0.04
SRP54-206ENST00000555317 TLR7Q9NYK1 1049 aaKnown RBP14.8□□□□□ -0.04
SRP54-206ENST00000555317 LRP2BPQ9P2M1 347 aa14.8□□□□□ -0.04
SRP54-206ENST00000555317 DAGLAQ9Y4D2 1042 aa14.8□□□□□ -0.04
SRP54-206ENST00000555317 PPP1R12BO60237 982 aaPredicted RBP14.79□□□□□ -0.04
SRP54-206ENST00000555317 ZNF157P51786 506 aaPredicted RBP14.79□□□□□ -0.04
SRP54-206ENST00000555317 AOX1Q06278 1338 aa14.79□□□□□ -0.04
SRP54-206ENST00000555317 RASA3Q14644 834 aa14.79□□□□□ -0.04
SRP54-206ENST00000555317 AK9Q5TCS8 1911 aa14.79□□□□□ -0.04
SRP54-206ENST00000555317 RGMBQ6NW40 437 aa14.79□□□□□ -0.04
SRP54-206ENST00000555317 ZNF512BQ96KM6 892 aaPredicted RBP14.79□□□□□ -0.04
SRP54-206ENST00000555317 NOL10Q9BSC4 688 aaKnown RBP14.79□□□□□ -0.04
SRP54-206ENST00000555317 LRRCC1Q9C099 1032 aa14.79□□□□□ -0.04
SRP54-206ENST00000555317 SNRKQ9NRH2 765 aa14.79□□□□□ -0.04
SRP54-206ENST00000555317 LDHCP07864 332 aa14.78□□□□□ -0.04
SRP54-206ENST00000555317 CACNB3P54284 484 aa14.78□□□□□ -0.04
SRP54-206ENST00000555317 PRKG1Q13976 671 aa14.78□□□□□ -0.04
SRP54-206ENST00000555317 APOBEC3HQ6NTF7 200 aaKnown RBP14.78□□□□□ -0.04
SRP54-206ENST00000555317 TBC1D9Q6ZT07 1266 aa14.78□□□□□ -0.04
SRP54-206ENST00000555317 CCDC102AQ96A19 550 aa14.78□□□□□ -0.04
SRP54-206ENST00000555317 AIDAQ96BJ3 306 aa14.78□□□□□ -0.04
SRP54-206ENST00000555317 AKAP11Q9UKA4 1901 aa14.78□□□□□ -0.04
SRP54-206ENST00000555317 MROH7-TTC4A0A0A0MT08 1334 aa14.77□□□□□ -0.04
SRP54-206ENST00000555317 MECOMQ03112 1051 aa14.77□□□□□ -0.05
SRP54-206ENST00000555317 AAMPQ13685 434 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms