RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SHTN1A0MZ66 631 aa20.86■□□□□ 0.93
SHOX-204ENST00000554971 POTECB2RU33 542 aa20.86■□□□□ 0.93
SHOX-204ENST00000554971 TTC39AQ5SRH9 613 aa20.86■□□□□ 0.93
SHOX-204ENST00000554971 DPY19L2Q6NUT2 758 aa20.86■□□□□ 0.93
SHOX-204ENST00000554971 GNL3LQ9NVN8 582 aaKnown RBP20.86■□□□□ 0.93
SHOX-204ENST00000554971 SEMA3EO15041 775 aa20.86■□□□□ 0.93
SHOX-204ENST00000554971 GMPSP49915 693 aaPredicted RBP20.86■□□□□ 0.93
SHOX-204ENST00000554971 L3MBTL3Q96JM7 780 aaPredicted RBP20.86■□□□□ 0.93
SHOX-204ENST00000554971 ADAMTSL1Q8N6G6 1762 aa20.85■□□□□ 0.93
SHOX-204ENST00000554971 FSD2A1L4K1 749 aa20.85■□□□□ 0.93
SHOX-204ENST00000554971 CD2BP2O95400 341 aaKnown RBP20.85■□□□□ 0.93
SHOX-204ENST00000554971 NUCB2P80303 420 aa20.85■□□□□ 0.93
SHOX-204ENST00000554971 MFSD14BQ5SR56 506 aa20.85■□□□□ 0.93
SHOX-204ENST00000554971 SPATA5Q8NB90 893 aa20.85■□□□□ 0.93
SHOX-204ENST00000554971 SNRKQ9NRH2 765 aa20.85■□□□□ 0.93
SHOX-204ENST00000554971 DENND2AQ9ULE3 1009 aa20.85■□□□□ 0.93
SHOX-204ENST00000554971 PDS5AQ29RF7 1337 aaKnown RBP20.85■□□□□ 0.93
SHOX-204ENST00000554971 DOCK2Q92608 1830 aa20.85■□□□□ 0.93
SHOX-204ENST00000554971 YY1P25490 414 aa20.84■□□□□ 0.93
SHOX-204ENST00000554971 MCM2P49736 904 aa20.84■□□□□ 0.93
SHOX-204ENST00000554971 ZNF526Q8TF50 670 aaPredicted RBP20.84■□□□□ 0.93
SHOX-204ENST00000554971 UQCRFS1P1P0C7P4 283 aa20.84■□□□□ 0.93
SHOX-204ENST00000554971 ANAPC15P60006 121 aa20.84■□□□□ 0.93
SHOX-204ENST00000554971 IL17RAQ96F46 866 aa20.84■□□□□ 0.93
SHOX-204ENST00000554971 GOLGA6L3A6NEY3 463 aa20.83■□□□□ 0.93
SHOX-204ENST00000554971 GOLGA6L22H0YM25 854 aa20.83■□□□□ 0.93
SHOX-204ENST00000554971 CYP2E1P05181 493 aaPredicted RBP20.82■□□□□ 0.92
SHOX-204ENST00000554971 ATP5JP18859 108 aa20.82■□□□□ 0.92
SHOX-204ENST00000554971 MCCP23508 829 aa20.82■□□□□ 0.92
SHOX-204ENST00000554971 ZAP70P43403 619 aa20.82■□□□□ 0.92
SHOX-204ENST00000554971 AGBL3Q8NEM8 1001 aa20.82■□□□□ 0.92
SHOX-204ENST00000554971 PI4K2BQ8TCG2 481 aa20.82■□□□□ 0.92
SHOX-204ENST00000554971 ECHDC1Q9NTX5 307 aa20.82■□□□□ 0.92
SHOX-204ENST00000554971 PRDX5P30044 214 aa20.82■□□□□ 0.92
SHOX-204ENST00000554971 FKBP1AP62942 108 aaKnown RBP20.82■□□□□ 0.92
SHOX-204ENST00000554971 KIAA0825Q8IV33 1275 aa20.82■□□□□ 0.92
SHOX-204ENST00000554971 DPF2Q92785 391 aa20.82■□□□□ 0.92
SHOX-204ENST00000554971 GPRC5DQ9NZD1 345 aa20.82■□□□□ 0.92
SHOX-204ENST00000554971 SALL1Q9NSC2 1324 aa20.82■□□□□ 0.92
SHOX-204ENST00000554971 MYH2Q9UKX2 1941 aa20.81■□□□□ 0.92
SHOX-204ENST00000554971 RPS12P25398 132 aaKnown RBP20.81■□□□□ 0.92
SHOX-204ENST00000554971 EPS15P42566 896 aa20.81■□□□□ 0.92
SHOX-204ENST00000554971 WDR66Q8TBY9 1149 aa20.81■□□□□ 0.92
SHOX-204ENST00000554971 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.81■□□□□ 0.92
SHOX-204ENST00000554971 BOLA2Q9H3K6 86 aa20.81■□□□□ 0.92
SHOX-204ENST00000554971 NMRK2Q9NPI5 230 aa20.81■□□□□ 0.92
SHOX-204ENST00000554971 EGFRP00533 1210 aa20.8■□□□□ 0.92
SHOX-204ENST00000554971 TBC1D22AQ8WUA7 517 aa20.8■□□□□ 0.92
SHOX-204ENST00000554971 EDC3Q96F86 508 aaKnown RBP20.8■□□□□ 0.92
SHOX-204ENST00000554971 ESYT1Q9BSJ8 1104 aa20.8■□□□□ 0.92
SHOX-204ENST00000554971 BRPF3Q9ULD4 1205 aa20.8■□□□□ 0.92
SHOX-204ENST00000554971 MYO3BQ8WXR4 1341 aa20.8■□□□□ 0.92
SHOX-204ENST00000554971 MICALL2Q8IY33 904 aa20.8■□□□□ 0.92
SHOX-204ENST00000554971 CNOT7Q9UIV1 285 aaKnown RBP20.8■□□□□ 0.92
SHOX-204ENST00000554971 TTC41PQ6P2S7 1318 aa20.8■□□□□ 0.92
SHOX-204ENST00000554971 MYH7P12883 1935 aa20.79■□□□□ 0.92
SHOX-204ENST00000554971 F8W031 263 aaPredicted RBP20.79■□□□□ 0.92
SHOX-204ENST00000554971 ZNF384Q8TF68 577 aa20.79■□□□□ 0.92
SHOX-204ENST00000554971 POLR2AP24928 1970 aaKnown RBP20.79■□□□□ 0.92
SHOX-204ENST00000554971 ZNF784Q8NCA9 323 aaPredicted RBP20.78■□□□□ 0.92
SHOX-204ENST00000554971 HAUS7Q99871 368 aa20.78■□□□□ 0.92
SHOX-204ENST00000554971 RRAGCQ9HB90 399 aa20.78■□□□□ 0.92
SHOX-204ENST00000554971 USP17L8P0C7I0 530 aa20.78■□□□□ 0.92
SHOX-204ENST00000554971 CHMLP26374 656 aa20.78■□□□□ 0.92
SHOX-204ENST00000554971 ZNF280AP59817 542 aaPredicted RBP20.78■□□□□ 0.92
SHOX-204ENST00000554971 PIH1D3Q9NQM4 214 aaKnown RBP20.78■□□□□ 0.92
SHOX-204ENST00000554971 ABCF2Q9UG63 623 aa20.78■□□□□ 0.92
SHOX-204ENST00000554971 PCDHAC2Q9Y5I4 1007 aa20.78■□□□□ 0.92
SHOX-204ENST00000554971 MRE11P49959 708 aa20.77■□□□□ 0.92
SHOX-204ENST00000554971 DNAJC2Q99543 621 aaKnown RBP20.77■□□□□ 0.92
SHOX-204ENST00000554971 MAST2Q6P0Q8 1798 aa20.77■□□□□ 0.92
SHOX-204ENST00000554971 SAMD7Q7Z3H4 446 aa20.76■□□□□ 0.91
SHOX-204ENST00000554971 TRPM4Q8TD43 1214 aa20.76■□□□□ 0.91
SHOX-204ENST00000554971 GPATCH3Q96I76 525 aa20.76■□□□□ 0.91
SHOX-204ENST00000554971 TTF2Q9UNY4 1162 aaKnown RBP20.76■□□□□ 0.91
SHOX-204ENST00000554971 PCNTO95613 3336 aa20.76■□□□□ 0.91
SHOX-204ENST00000554971 TAF1DQ9H5J8 278 aaPredicted RBP20.76■□□□□ 0.91
SHOX-204ENST00000554971 HACL1Q9UJ83 578 aa20.76■□□□□ 0.91
SHOX-204ENST00000554971 SUGT1Q9Y2Z0 365 aa20.76■□□□□ 0.91
SHOX-204ENST00000554971 ECM29Q5VYK3 1845 aa20.75■□□□□ 0.91
SHOX-204ENST00000554971 GOLIM4O00461 696 aa20.75■□□□□ 0.91
SHOX-204ENST00000554971 HIRAP54198 1017 aaPredicted RBP20.75■□□□□ 0.91
SHOX-204ENST00000554971 GPBP1L1Q9HC44 474 aaPredicted RBP20.75■□□□□ 0.91
SHOX-204ENST00000554971 AK9Q5TCS8 1911 aa20.75■□□□□ 0.91
SHOX-204ENST00000554971 GLRX3O76003 335 aaKnown RBP20.74■□□□□ 0.91
SHOX-204ENST00000554971 LDHBP07195 334 aaKnown RBP20.74■□□□□ 0.91
SHOX-204ENST00000554971 DIXDC1Q155Q3 683 aa20.74■□□□□ 0.91
SHOX-204ENST00000554971 PAG1Q9NWQ8 432 aa20.74■□□□□ 0.91
SHOX-204ENST00000554971 CEP350Q5VT06 3117 aa20.74■□□□□ 0.91
SHOX-204ENST00000554971 MAP4K4O95819 1239 aaPredicted RBP20.74■□□□□ 0.91
SHOX-204ENST00000554971 POTEIP0CG38 1075 aa20.74■□□□□ 0.91
SHOX-204ENST00000554971 POTEJP0CG39 1038 aa20.74■□□□□ 0.91
SHOX-204ENST00000554971 VEGFAP15692 232 aaPredicted RBP20.74■□□□□ 0.91
SHOX-204ENST00000554971 LMOD1P29536 600 aaPredicted RBP20.74■□□□□ 0.91
SHOX-204ENST00000554971 EPHX2P34913 555 aa20.74■□□□□ 0.91
SHOX-204ENST00000554971 TBC1D10BQ4KMP7 808 aaPredicted RBP20.74■□□□□ 0.91
SHOX-204ENST00000554971 ZGPATQ8N5A5 531 aaKnown RBP20.74■□□□□ 0.91
SHOX-204ENST00000554971 MYOZ2Q9NPC6 264 aa20.74■□□□□ 0.91
SHOX-204ENST00000554971 IQCA1LA6NCM1 817 aa20.73■□□□□ 0.91
SHOX-204ENST00000554971 TRIM6-TRIM34B2RNG4 842 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms