RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 CSADQ9Y600 493 aa22.4■■□□□ 1.18
SYNE2-211ENST00000553801 TCP10L2B9ZVM9 353 aa22.39■■□□□ 1.17
SYNE2-211ENST00000553801 WDHD1O75717 1129 aaPredicted RBP22.39■■□□□ 1.17
SYNE2-211ENST00000553801 CRKP46108 304 aa22.39■■□□□ 1.17
SYNE2-211ENST00000553801 TAF1CQ15572 869 aaPredicted RBP22.39■■□□□ 1.17
SYNE2-211ENST00000553801 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.39■■□□□ 1.17
SYNE2-211ENST00000553801 VPS37DQ86XT2 251 aa22.39■■□□□ 1.17
SYNE2-211ENST00000553801 TEPSINQ96N21 525 aa22.39■■□□□ 1.17
SYNE2-211ENST00000553801 SRCIN1Q9C0H9 1055 aa22.39■■□□□ 1.17
SYNE2-211ENST00000553801 RBBP6Q7Z6E9 1792 aaKnown RBP22.38■■□□□ 1.17
SYNE2-211ENST00000553801 CCL15-CCL14A0A0B4J2E2 113 aa22.38■■□□□ 1.17
SYNE2-211ENST00000553801 CCL15Q16663 113 aa22.38■■□□□ 1.17
SYNE2-211ENST00000553801 SLC4A10Q6U841 1118 aa22.38■■□□□ 1.17
SYNE2-211ENST00000553801 NBPF11Q86T75 865 aa22.38■■□□□ 1.17
SYNE2-211ENST00000553801 MRS2Q9HD23 443 aa22.38■■□□□ 1.17
SYNE2-211ENST00000553801 MROH5Q6ZUA9 1318 aa22.37■■□□□ 1.17
SYNE2-211ENST00000553801 HDLBPQ00341 1268 aaKnown RBP22.37■■□□□ 1.17
SYNE2-211ENST00000553801 VGLL4Q14135 290 aa22.37■■□□□ 1.17
SYNE2-211ENST00000553801 HABP4Q5JVS0 413 aaKnown RBP22.37■■□□□ 1.17
SYNE2-211ENST00000553801 TBC1D22AQ8WUA7 517 aa22.37■■□□□ 1.17
SYNE2-211ENST00000553801 BRI3BPQ8WY22 251 aa22.37■■□□□ 1.17
SYNE2-211ENST00000553801 TMEM39BQ9GZU3 492 aa22.37■■□□□ 1.17
SYNE2-211ENST00000553801 OTOFQ9HC10 1997 aa22.37■■□□□ 1.17
SYNE2-211ENST00000553801 EN2P19622 333 aaPredicted RBP22.36■■□□□ 1.17
SYNE2-211ENST00000553801 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.36■■□□□ 1.17
SYNE2-211ENST00000553801 PUS3Q9BZE2 481 aaKnown RBP22.36■■□□□ 1.17
SYNE2-211ENST00000553801 RIPOR2Q9Y4F9 1068 aa22.36■■□□□ 1.17
SYNE2-211ENST00000553801 FRAT2O75474 233 aaPredicted RBP22.35■■□□□ 1.17
SYNE2-211ENST00000553801 SLC9C1Q4G0N8 1177 aa22.35■■□□□ 1.17
SYNE2-211ENST00000553801 CAVIN4Q5BKX8 364 aa22.35■■□□□ 1.17
SYNE2-211ENST00000553801 FBXO33Q7Z6M2 555 aa22.35■■□□□ 1.17
SYNE2-211ENST00000553801 CDAN1Q8IWY9 1227 aa22.35■■□□□ 1.17
SYNE2-211ENST00000553801 CNKSR2Q8WXI2 1034 aa22.35■■□□□ 1.17
SYNE2-211ENST00000553801 HOOK2Q96ED9 719 aa22.35■■□□□ 1.17
SYNE2-211ENST00000553801 SUCLG2Q96I99 432 aa22.35■■□□□ 1.17
SYNE2-211ENST00000553801 ZNF333Q96JL9 665 aa22.35■■□□□ 1.17
SYNE2-211ENST00000553801 TEKT1Q969V4 418 aa22.34■■□□□ 1.17
SYNE2-211ENST00000553801 OTUD5Q96G74 571 aa22.34■■□□□ 1.17
SYNE2-211ENST00000553801 TMOD2Q9NZR1 351 aa22.34■■□□□ 1.17
SYNE2-211ENST00000553801 CETPP11597 493 aa22.33■■□□□ 1.17
SYNE2-211ENST00000553801 CAP1Q01518 475 aa22.33■■□□□ 1.17
SYNE2-211ENST00000553801 CHAF1AQ13111 956 aaPredicted RBP22.33■■□□□ 1.17
SYNE2-211ENST00000553801 KIF22Q14807 665 aa22.33■■□□□ 1.17
SYNE2-211ENST00000553801 MRIQ9BWK5 157 aa22.33■■□□□ 1.17
SYNE2-211ENST00000553801 ARAP2Q8WZ64 1704 aa22.33■■□□□ 1.17
SYNE2-211ENST00000553801 HTTP42858 3142 aa22.33■■□□□ 1.16
SYNE2-211ENST00000553801 SPDYE5A6NIY4 337 aa22.32■■□□□ 1.16
SYNE2-211ENST00000553801 METTL24Q5JXM2 366 aa22.32■■□□□ 1.16
SYNE2-211ENST00000553801 ERO1BQ86YB8 467 aa22.32■■□□□ 1.16
SYNE2-211ENST00000553801 FAM43AQ8N2R8 423 aa22.32■■□□□ 1.16
SYNE2-211ENST00000553801 ZCCHC17Q9NP64 241 aaKnown RBP22.32■■□□□ 1.16
SYNE2-211ENST00000553801 IQSEC3Q9UPP2 1182 aaPredicted RBP22.32■■□□□ 1.16
SYNE2-211ENST00000553801 PTCH2Q9Y6C5 1203 aa22.32■■□□□ 1.16
SYNE2-211ENST00000553801 SLC4A8Q2Y0W8 1093 aa22.31■■□□□ 1.16
SYNE2-211ENST00000553801 FAM83AQ86UY5 434 aa22.31■■□□□ 1.16
SYNE2-211ENST00000553801 KAZALD1Q96I82 304 aa22.31■■□□□ 1.16
SYNE2-211ENST00000553801 SPINK5Q9NQ38 1064 aaPredicted RBP22.31■■□□□ 1.16
SYNE2-211ENST00000553801 UTYO14607 1347 aa22.31■■□□□ 1.16
SYNE2-211ENST00000553801 MAST3O60307 1309 aa22.31■■□□□ 1.16
SYNE2-211ENST00000553801 TLR2O60603 784 aa22.3■■□□□ 1.16
SYNE2-211ENST00000553801 NBPF7P0C2Y1 421 aaPredicted RBP22.3■■□□□ 1.16
SYNE2-211ENST00000553801 SNAPC2Q13487 334 aa22.3■■□□□ 1.16
SYNE2-211ENST00000553801 GRIK5Q16478 980 aa22.3■■□□□ 1.16
SYNE2-211ENST00000553801 FKBP1CQ5VVH2 108 aa22.3■■□□□ 1.16
SYNE2-211ENST00000553801 ZDHHC15Q96MV8 337 aa22.3■■□□□ 1.16
SYNE2-211ENST00000553801 SUGT1Q9Y2Z0 365 aa22.3■■□□□ 1.16
SYNE2-211ENST00000553801 PDE8BO95263 885 aa22.29■■□□□ 1.16
SYNE2-211ENST00000553801 GNRH1P01148 92 aa22.29■■□□□ 1.16
SYNE2-211ENST00000553801 RABL6Q3YEC7 729 aaPredicted RBP22.29■■□□□ 1.16
SYNE2-211ENST00000553801 DCAF15Q66K64 600 aa22.29■■□□□ 1.16
SYNE2-211ENST00000553801 WRNIP1Q96S55 665 aa22.29■■□□□ 1.16
SYNE2-211ENST00000553801 BICC1Q9H694 974 aaKnown RBP22.29■■□□□ 1.16
SYNE2-211ENST00000553801 SNCAIPQ9Y6H5 919 aa22.29■■□□□ 1.16
SYNE2-211ENST00000553801 CACNB3P54284 484 aa22.28■■□□□ 1.16
SYNE2-211ENST00000553801 LRRC24Q50LG9 513 aa22.28■■□□□ 1.16
SYNE2-211ENST00000553801 BTBD19C9JJ37 291 aa22.27■■□□□ 1.16
SYNE2-211ENST00000553801 ANP32CO43423 234 aa22.27■■□□□ 1.16
SYNE2-211ENST00000553801 PRMT2P55345 433 aa22.27■■□□□ 1.16
SYNE2-211ENST00000553801 PPIL2Q13356 520 aa22.27■■□□□ 1.16
SYNE2-211ENST00000553801 MKI67P46013 3256 aaKnown RBP22.26■■□□□ 1.15
SYNE2-211ENST00000553801 IRF6O14896 467 aa22.26■■□□□ 1.15
SYNE2-211ENST00000553801 IFIT1P09914 478 aaKnown RBP22.26■■□□□ 1.15
SYNE2-211ENST00000553801 BCAMP50895 628 aa22.26■■□□□ 1.15
SYNE2-211ENST00000553801 LACTBP83111 547 aaPredicted RBP22.26■■□□□ 1.15
SYNE2-211ENST00000553801 APOBEC3HQ6NTF7 200 aaKnown RBP22.26■■□□□ 1.15
SYNE2-211ENST00000553801 HHIPL2Q6UWX4 724 aa22.26■■□□□ 1.15
SYNE2-211ENST00000553801 ZKSCAN4Q969J2 545 aaPredicted RBP22.26■■□□□ 1.15
SYNE2-211ENST00000553801 CENPFP49454 3210 aa22.25■■□□□ 1.15
SYNE2-211ENST00000553801 PPATQ06203 517 aa22.25■■□□□ 1.15
SYNE2-211ENST00000553801 VGLL2Q8N8G2 317 aa22.25■■□□□ 1.15
SYNE2-211ENST00000553801 ZNF341Q9BYN7 854 aa22.25■■□□□ 1.15
SYNE2-211ENST00000553801 KIF16BQ96L93 1317 aa22.25■■□□□ 1.15
SYNE2-211ENST00000553801 ANKRD44Q8N8A2 993 aa22.24■■□□□ 1.15
SYNE2-211ENST00000553801 RPAP1Q9BWH6 1393 aaPredicted RBP22.24■■□□□ 1.15
SYNE2-211ENST00000553801 PUM3Q15397 648 aaKnown RBP22.23■■□□□ 1.15
SYNE2-211ENST00000553801 SH3TC2Q8TF17 1288 aa22.23■■□□□ 1.15
SYNE2-211ENST00000553801 ARHGAP39Q9C0H5 1083 aa22.23■■□□□ 1.15
SYNE2-211ENST00000553801 MYCP01106 439 aaPredicted RBP22.22■■□□□ 1.15
SYNE2-211ENST00000553801 WDR66Q8TBY9 1149 aa22.22■■□□□ 1.15
SYNE2-211ENST00000553801 HOXD10P28358 340 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms