RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 TCP10L2B9ZVM9 353 aa22.7■■□□□ 1.22
SHMT2-206ENST00000553529 IPO8O15397 1037 aaKnown RBP22.7■■□□□ 1.22
SHMT2-206ENST00000553529 TIMM10P62072 90 aa22.7■■□□□ 1.22
SHMT2-206ENST00000553529 CLMNQ96JQ2 1002 aa22.7■■□□□ 1.22
SHMT2-206ENST00000553529 CSRNP1Q96S65 589 aa22.7■■□□□ 1.22
SHMT2-206ENST00000553529 CEP126Q9P2H0 1117 aa22.7■■□□□ 1.22
SHMT2-206ENST00000553529 ANGEL1Q9UNK9 670 aaKnown RBP22.7■■□□□ 1.22
SHMT2-206ENST00000553529 OTOFQ9HC10 1997 aa22.7■■□□□ 1.22
SHMT2-206ENST00000553529 GNAI3P08754 354 aa22.69■■□□□ 1.22
SHMT2-206ENST00000553529 RASA3Q14644 834 aa22.69■■□□□ 1.22
SHMT2-206ENST00000553529 SPDYE2Q495Y8 402 aa22.69■■□□□ 1.22
SHMT2-206ENST00000553529 BEGAINQ9BUH8 593 aa22.69■■□□□ 1.22
SHMT2-206ENST00000553529 CASP8AP2Q9UKL3 1982 aa22.69■■□□□ 1.22
SHMT2-206ENST00000553529 IL15P40933 162 aaPredicted RBP22.68■■□□□ 1.22
SHMT2-206ENST00000553529 MTX1Q13505 466 aa22.68■■□□□ 1.22
SHMT2-206ENST00000553529 DIXDC1Q155Q3 683 aa22.68■■□□□ 1.22
SHMT2-206ENST00000553529 PANK1Q8TE04 598 aa22.68■■□□□ 1.22
SHMT2-206ENST00000553529 TMEM39BQ9GZU3 492 aa22.68■■□□□ 1.22
SHMT2-206ENST00000553529 SERPINA10Q9UK55 444 aa22.68■■□□□ 1.22
SHMT2-206ENST00000553529 GNAI2P04899 355 aa22.67■■□□□ 1.22
SHMT2-206ENST00000553529 PRDX5P30044 214 aa22.67■■□□□ 1.22
SHMT2-206ENST00000553529 CCDC102AQ96A19 550 aa22.67■■□□□ 1.22
SHMT2-206ENST00000553529 RNF186Q9NXI6 227 aa22.67■■□□□ 1.22
SHMT2-206ENST00000553529 TRPA1O75762 1119 aa22.66■■□□□ 1.22
SHMT2-206ENST00000553529 FKBP1BP68106 108 aa22.66■■□□□ 1.22
SHMT2-206ENST00000553529 ITPRIPQ8IWB1 547 aa22.66■■□□□ 1.22
SHMT2-206ENST00000553529 TEPSINQ96N21 525 aa22.66■■□□□ 1.22
SHMT2-206ENST00000553529 MYO1BO43795 1136 aa22.65■■□□□ 1.22
SHMT2-206ENST00000553529 MMP14P50281 582 aa22.65■■□□□ 1.22
SHMT2-206ENST00000553529 CCDC102BQ68D86 513 aa22.65■■□□□ 1.22
SHMT2-206ENST00000553529 APOBEC3HQ6NTF7 200 aaKnown RBP22.65■■□□□ 1.22
SHMT2-206ENST00000553529 PI16Q6UXB8 463 aa22.65■■□□□ 1.22
SHMT2-206ENST00000553529 A0A1B0GUL7 405 aa22.64■■□□□ 1.21
SHMT2-206ENST00000553529 NF2P35240 595 aa22.64■■□□□ 1.21
SHMT2-206ENST00000553529 LDLRAD1Q5T700 205 aa22.64■■□□□ 1.21
SHMT2-206ENST00000553529 USP2O75604 605 aaPredicted RBP22.63■■□□□ 1.21
SHMT2-206ENST00000553529 GJA5P36382 358 aa22.63■■□□□ 1.21
SHMT2-206ENST00000553529 RASGRF1Q13972 1273 aa22.63■■□□□ 1.21
SHMT2-206ENST00000553529 TBC1D22AQ8WUA7 517 aa22.63■■□□□ 1.21
SHMT2-206ENST00000553529 XAGE2Q96GT9 111 aa22.63■■□□□ 1.21
SHMT2-206ENST00000553529 FBXO3Q9UK99 471 aa22.63■■□□□ 1.21
SHMT2-206ENST00000553529 AKAP11Q9UKA4 1901 aa22.63■■□□□ 1.21
SHMT2-206ENST00000553529 ARMC9Q7Z3E5 817 aa22.62■■□□□ 1.21
SHMT2-206ENST00000553529 FTSJ3Q8IY81 847 aaKnown RBP22.62■■□□□ 1.21
SHMT2-206ENST00000553529 CNKSR2Q8WXI2 1034 aa22.62■■□□□ 1.21
SHMT2-206ENST00000553529 TEKT1Q969V4 418 aa22.62■■□□□ 1.21
SHMT2-206ENST00000553529 ZBTB7BO15156 539 aaPredicted RBP22.61■■□□□ 1.21
SHMT2-206ENST00000553529 POLA2Q14181 598 aa22.61■■□□□ 1.21
SHMT2-206ENST00000553529 ZDHHC15Q96MV8 337 aa22.61■■□□□ 1.21
SHMT2-206ENST00000553529 R3HDMLQ9H3Y0 253 aa22.61■■□□□ 1.21
SHMT2-206ENST00000553529 DAGLAQ9Y4D2 1042 aa22.61■■□□□ 1.21
SHMT2-206ENST00000553529 NEUROD6Q96NK8 337 aa22.6■■□□□ 1.21
SHMT2-206ENST00000553529 TBC1D8O95759 1140 aa22.59■■□□□ 1.21
SHMT2-206ENST00000553529 SLURP2P0DP57 97 aa22.59■■□□□ 1.21
SHMT2-206ENST00000553529 NFIAQ12857 509 aa22.59■■□□□ 1.21
SHMT2-206ENST00000553529 PPP2R3BQ9Y5P8 575 aa22.59■■□□□ 1.21
SHMT2-206ENST00000553529 MAP3K11Q16584 847 aa22.58■■□□□ 1.21
SHMT2-206ENST00000553529 SPRYD7Q5W111 196 aa22.58■■□□□ 1.21
SHMT2-206ENST00000553529 WDR66Q8TBY9 1149 aa22.58■■□□□ 1.21
SHMT2-206ENST00000553529 HDAC5Q9UQL6 1122 aa22.58■■□□□ 1.21
SHMT2-206ENST00000553529 ATP8B2P98198 1209 aa22.57■■□□□ 1.2
SHMT2-206ENST00000553529 HDLBPQ00341 1268 aaKnown RBP22.57■■□□□ 1.2
SHMT2-206ENST00000553529 CDC42EP5Q6NZY7 148 aa22.57■■□□□ 1.2
SHMT2-206ENST00000553529 TBC1D9Q6ZT07 1266 aa22.57■■□□□ 1.2
SHMT2-206ENST00000553529 ZFPM1Q8IX07 1006 aa22.57■■□□□ 1.2
SHMT2-206ENST00000553529 ZNF384Q8TF68 577 aa22.57■■□□□ 1.2
SHMT2-206ENST00000553529 WNK4Q96J92 1243 aa22.57■■□□□ 1.2
SHMT2-206ENST00000553529 ELP3Q9H9T3 547 aa22.57■■□□□ 1.2
SHMT2-206ENST00000553529 MYH2Q9UKX2 1941 aa22.57■■□□□ 1.2
SHMT2-206ENST00000553529 TCP10Q12799 353 aa22.56■■□□□ 1.2
SHMT2-206ENST00000553529 SSH3Q8TE77 659 aa22.56■■□□□ 1.2
SHMT2-206ENST00000553529 ABHD8Q96I13 439 aa22.56■■□□□ 1.2
SHMT2-206ENST00000553529 TLR7Q9NYK1 1049 aaKnown RBP22.56■■□□□ 1.2
SHMT2-206ENST00000553529 DENND2AQ9ULE3 1009 aa22.56■■□□□ 1.2
SHMT2-206ENST00000553529 CA12O43570 354 aa22.55■■□□□ 1.2
SHMT2-206ENST00000553529 LDHBP07195 334 aaKnown RBP22.55■■□□□ 1.2
SHMT2-206ENST00000553529 G3BP1Q13283 466 aaKnown RBP eCLIP22.55■■□□□ 1.28e-8■■■□□ 16.6
SHMT2-206ENST00000553529 SUPT20HL1Q3ZLR7 823 aa22.55■■□□□ 1.2
SHMT2-206ENST00000553529 C20orf194Q5TEA3 1177 aa22.55■■□□□ 1.2
SHMT2-206ENST00000553529 HHIPL2Q6UWX4 724 aa22.55■■□□□ 1.2
SHMT2-206ENST00000553529 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.55■■□□□ 1.2
SHMT2-206ENST00000553529 SLC10A4Q96EP9 437 aa22.55■■□□□ 1.2
SHMT2-206ENST00000553529 MCOLN1Q9GZU1 580 aa22.55■■□□□ 1.2
SHMT2-206ENST00000553529 HMG20BQ9P0W2 317 aa22.55■■□□□ 1.2
SHMT2-206ENST00000553529 ABCF2Q9UG63 623 aa22.55■■□□□ 1.2
SHMT2-206ENST00000553529 PPP1R12BO60237 982 aaPredicted RBP22.54■■□□□ 1.2
SHMT2-206ENST00000553529 SURF6O75683 361 aaKnown RBP22.54■■□□□ 1.2
SHMT2-206ENST00000553529 TNFAIP1Q13829 316 aa22.54■■□□□ 1.2
SHMT2-206ENST00000553529 CEP85Q6P2H3 762 aa22.54■■□□□ 1.2
SHMT2-206ENST00000553529 MIGA2Q7L4E1 593 aa22.54■■□□□ 1.2
SHMT2-206ENST00000553529 DBNDD2Q9BQY9 259 aa22.54■■□□□ 1.2
SHMT2-206ENST00000553529 GNL3LQ9NVN8 582 aaKnown RBP22.54■■□□□ 1.2
SHMT2-206ENST00000553529 COG6Q9Y2V7 657 aa22.54■■□□□ 1.2
SHMT2-206ENST00000553529 SALL1Q9NSC2 1324 aa22.54■■□□□ 1.2
SHMT2-206ENST00000553529 IGF2BP3O00425 579 aaKnown RBP eCLIP22.53■■□□□ 1.2
SHMT2-206ENST00000553529 MCAMP43121 646 aa22.53■■□□□ 1.2
SHMT2-206ENST00000553529 SNRKQ9NRH2 765 aa22.53■■□□□ 1.2
SHMT2-206ENST00000553529 SAGE1Q9NXZ1 904 aa22.53■■□□□ 1.2
SHMT2-206ENST00000553529 FAM198AQ9UFP1 575 aa22.53■■□□□ 1.2
SHMT2-206ENST00000553529 SUGT1Q9Y2Z0 365 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms