RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 MAP3K12Q12852 859 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 RASGRF1Q13972 1273 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 SUPT20HL1Q3ZLR7 823 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 CFAP100Q494V2 611 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 RBM26Q5T8P6 1007 aaKnown RBP12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 ERICH6BQ5W0A0 696 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 ZSCAN25Q6NSZ9 544 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 SAMD7Q7Z3H4 446 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 EAF2Q96CJ1 260 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 ABCF2Q9UG63 623 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 ARAP2Q8WZ64 1704 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
TRAFD1-208ENST00000552890 UNCXA6NJT0 531 aa12.5□□□□□ -0.41
TRAFD1-208ENST00000552890 WNT10BO00744 389 aa12.5□□□□□ -0.41
TRAFD1-208ENST00000552890 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
TRAFD1-208ENST00000552890 ADORA1P30542 326 aa12.5□□□□□ -0.41
TRAFD1-208ENST00000552890 DBNDD2Q9BQY9 259 aa12.5□□□□□ -0.41
TRAFD1-208ENST00000552890 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.418e-7■■■■■ 37.5
TRAFD1-208ENST00000552890 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
TRAFD1-208ENST00000552890 DBNLQ9UJU6 430 aaKnown RBP12.5□□□□□ -0.41
TRAFD1-208ENST00000552890 IQSEC3Q9UPP2 1182 aaPredicted RBP12.5□□□□□ -0.41
TRAFD1-208ENST00000552890 PCDHB15Q9Y5E8 787 aa12.5□□□□□ -0.41
TRAFD1-208ENST00000552890 TTC41PQ6P2S7 1318 aa12.5□□□□□ -0.41
TRAFD1-208ENST00000552890 TMEM88BA6NKF7 163 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 F8W031 263 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 APBB1O00213 710 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 ATP5JP18859 108 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 CRKP46108 304 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 CERS5Q8N5B7 392 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 TRPM4Q8TD43 1214 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 CCDC8Q9H0W5 538 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 IL1RAPL2Q9NP60 686 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 ECHDC1Q9NTX5 307 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 GGA3Q9NZ52 723 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 RAI14Q9P0K7 980 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 HMG20BQ9P0W2 317 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 MYH13Q9UKX3 1938 aa12.49□□□□□ -0.41
TRAFD1-208ENST00000552890 ANGEL2Q5VTE6 544 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-208ENST00000552890 MAP1SQ66K74 1059 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-208ENST00000552890 FAM83AQ86UY5 434 aa12.48□□□□□ -0.41
TRAFD1-208ENST00000552890 C2orf69Q8N8R5 385 aa12.48□□□□□ -0.41
TRAFD1-208ENST00000552890 ZBED3Q96IU2 234 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-208ENST00000552890 HHIPL1Q96JK4 782 aa12.48□□□□□ -0.41
TRAFD1-208ENST00000552890 PASKQ96RG2 1323 aa12.47□□□□□ -0.41
TRAFD1-208ENST00000552890 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-208ENST00000552890 GLRX3O76003 335 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-208ENST00000552890 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-208ENST00000552890 MCAMP43121 646 aa12.47□□□□□ -0.41
TRAFD1-208ENST00000552890 HIRAP54198 1017 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-208ENST00000552890 ANKRD45Q5TZF3 282 aa12.47□□□□□ -0.41
TRAFD1-208ENST00000552890 SMC5Q8IY18 1101 aa12.47□□□□□ -0.41
TRAFD1-208ENST00000552890 EXOC6Q8TAG9 804 aa12.47□□□□□ -0.41
TRAFD1-208ENST00000552890 PPP1R12BO60237 982 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-208ENST00000552890 ZFYP08048 801 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-208ENST00000552890 ECE1P42892 770 aa12.46□□□□□ -0.41
TRAFD1-208ENST00000552890 NBPF9Q3BBW0 867 aa12.46□□□□□ -0.41
TRAFD1-208ENST00000552890 SPDYE2Q495Y8 402 aa12.46□□□□□ -0.41
TRAFD1-208ENST00000552890 NAA16Q6N069 864 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-208ENST00000552890 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
TRAFD1-208ENST00000552890 TAOK2Q9UL54 1235 aa12.46□□□□□ -0.41
TRAFD1-208ENST00000552890 ADAMTSL1Q8N6G6 1762 aa12.46□□□□□ -0.42
TRAFD1-208ENST00000552890 PRDX5P30044 214 aa12.45□□□□□ -0.42
TRAFD1-208ENST00000552890 ARMC9Q7Z3E5 817 aa12.45□□□□□ -0.42
TRAFD1-208ENST00000552890 USP48Q86UV5 1035 aa12.45□□□□□ -0.42
TRAFD1-208ENST00000552890 PRMT6Q96LA8 375 aaPredicted RBP12.45□□□□□ -0.42
TRAFD1-208ENST00000552890 HAUS7Q99871 368 aa12.45□□□□□ -0.42
TRAFD1-208ENST00000552890 DEFB129Q9H1M3 183 aa12.45□□□□□ -0.42
TRAFD1-208ENST00000552890 VEZTQ9HBM0 779 aa12.45□□□□□ -0.42
TRAFD1-208ENST00000552890 ZNF70Q9UC06 446 aaPredicted RBP12.45□□□□□ -0.42
TRAFD1-208ENST00000552890 JAG2Q9Y219 1238 aa12.45□□□□□ -0.42
TRAFD1-208ENST00000552890 MROH7-TTC4A0A0A0MT08 1334 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 GAKO14976 1311 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 AOX1Q06278 1338 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 GPR75-ASB3A0A0A6YYF3 556 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 CELF2O95319 508 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 POTEIP0CG38 1075 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 MX1P20591 662 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 MECOMQ03112 1051 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 DCAF15Q66K64 600 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 REM2Q8IYK8 340 aaPredicted RBP12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 NSUN4Q96CB9 384 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 PAG1Q9NWQ8 432 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 DAGLAQ9Y4D2 1042 aa12.44□□□□□ -0.42
TRAFD1-208ENST00000552890 ENTPD3O75355 529 aa12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 CYP2E1P05181 493 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 ZAP70P43403 619 aa12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 IREB2P48200 963 aaKnown RBP12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 PPP4CP60510 307 aa12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 APOBEC3HQ6NTF7 200 aaKnown RBP12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 CHD1LQ86WJ1 897 aa12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 GLIS2Q9BZE0 524 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 GBA2Q9HCG7 927 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 USP40Q9NVE5 1235 aa12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 ABT1Q9ULW3 272 aaKnown RBP12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 RPAP1Q9BWH6 1393 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-208ENST00000552890 SHTN1A0MZ66 631 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms