RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
NPAS3-213ENST00000552874 PRDX5P30044 214 aa9.43□□□□□ -0.9
NPAS3-213ENST00000552874 EPS15P42566 896 aa9.43□□□□□ -0.9
NPAS3-213ENST00000552874 HIRAP54198 1017 aaPredicted RBP9.43□□□□□ -0.9
NPAS3-213ENST00000552874 TNIP1Q15025 636 aa9.43□□□□□ -0.9
NPAS3-213ENST00000552874 CAVIN4Q5BKX8 364 aa9.43□□□□□ -0.9
NPAS3-213ENST00000552874 TTLL5Q6EMB2 1281 aa9.43□□□□□ -0.9
NPAS3-213ENST00000552874 C16orf71Q8IYS4 520 aaPredicted RBP9.43□□□□□ -0.9
NPAS3-213ENST00000552874 CLASRPQ8N2M8 674 aaKnown RBP9.43□□□□□ -0.9
NPAS3-213ENST00000552874 TAF1DQ9H5J8 278 aaPredicted RBP9.43□□□□□ -0.9
NPAS3-213ENST00000552874 PCDHAC2Q9Y5I4 1007 aa9.43□□□□□ -0.9
NPAS3-213ENST00000552874 GREB1LQ9C091 1923 aaPredicted RBP9.43□□□□□ -0.9
NPAS3-213ENST00000552874 GAKO14976 1311 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 CYP2E1P05181 493 aaPredicted RBP9.42□□□□□ -0.9
NPAS3-213ENST00000552874 UQCRFS1P1P0C7P4 283 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 ATP5JP18859 108 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 MFSD14BQ5SR56 506 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 TSHZ3Q63HK5 1081 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 MICALL2Q8IY33 904 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 SPATA5Q8NB90 893 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 MTMR14Q8NCE2 650 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 NEUROD6Q96NK8 337 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 RWDD1Q9H446 243 aaPredicted RBP9.42□□□□□ -0.9
NPAS3-213ENST00000552874 PIH1D3Q9NQM4 214 aaKnown RBP9.42□□□□□ -0.9
NPAS3-213ENST00000552874 STAP2Q9UGK3 403 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 DENND2AQ9ULE3 1009 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 GJA3Q9Y6H8 435 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 NDUFB9Q9Y6M9 179 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 DOCK1Q14185 1865 aa9.42□□□□□ -0.9
NPAS3-213ENST00000552874 ASTN2O75129 1339 aaPredicted RBP9.41□□□□□ -0.9
NPAS3-213ENST00000552874 TTC41PQ6P2S7 1318 aa9.41□□□□□ -0.9
NPAS3-213ENST00000552874 ZAP70P43403 619 aa9.41□□□□□ -0.9
NPAS3-213ENST00000552874 MNX1P50219 401 aaPredicted RBP9.41□□□□□ -0.9
NPAS3-213ENST00000552874 CHAF1AQ13111 956 aaPredicted RBP9.41□□□□□ -0.9
NPAS3-213ENST00000552874 ERICH6BQ5W0A0 696 aa9.41□□□□□ -0.9
NPAS3-213ENST00000552874 CHD1LQ86WJ1 897 aa9.41□□□□□ -0.9
NPAS3-213ENST00000552874 KIAA0825Q8IV33 1275 aa9.41□□□□□ -0.9
NPAS3-213ENST00000552874 ZNF526Q8TF50 670 aaPredicted RBP9.41□□□□□ -0.9
NPAS3-213ENST00000552874 TBC1D22AQ8WUA7 517 aa9.41□□□□□ -0.9
NPAS3-213ENST00000552874 LNPKQ9C0E8 428 aa9.41□□□□□ -0.9
NPAS3-213ENST00000552874 ANTXR1Q9H6X2 564 aa9.41□□□□□ -0.9
NPAS3-213ENST00000552874 HACL1Q9UJ83 578 aa9.41□□□□□ -0.9
NPAS3-213ENST00000552874 SUGT1Q9Y2Z0 365 aa9.41□□□□□ -0.9
NPAS3-213ENST00000552874 IFIT2P09913 472 aaKnown RBP9.4□□□□□ -0.9
NPAS3-213ENST00000552874 MX1P20591 662 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 EPHX2P34913 555 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 PDE1AP54750 535 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 TTC39AQ5SRH9 613 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 DPY19L2Q6NUT2 758 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 VPS37DQ86XT2 251 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 WDR66Q8TBY9 1149 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 NSUN4Q96CB9 384 aaKnown RBP9.4□□□□□ -0.9
NPAS3-213ENST00000552874 EDC3Q96F86 508 aaKnown RBP9.4□□□□□ -0.9
NPAS3-213ENST00000552874 HAUS7Q99871 368 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 OSBPL3Q9H4L5 887 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 RRAGCQ9HB90 399 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 GPBP1L1Q9HC44 474 aaPredicted RBP9.4□□□□□ -0.9
NPAS3-213ENST00000552874 MYOZ2Q9NPC6 264 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 SNRKQ9NRH2 765 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 ADARB2Q9NS39 739 aaKnown RBP9.4□□□□□ -0.9
NPAS3-213ENST00000552874 PGAP2Q9UHJ9 254 aa9.4□□□□□ -0.9
NPAS3-213ENST00000552874 CNOT7Q9UIV1 285 aaKnown RBP9.4□□□□□ -0.9
NPAS3-213ENST00000552874 TCRBV5S4A2TA0A5A2 114 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 IQCA1LA6NCM1 817 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 VEGFAP15692 232 aaPredicted RBP9.39□□□□□ -0.91
NPAS3-213ENST00000552874 MMP14P50281 582 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 HDLBPQ00341 1268 aaKnown RBP9.39□□□□□ -0.91
NPAS3-213ENST00000552874 DIXDC1Q155Q3 683 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 KIF4BQ2VIQ3 1234 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 CCDC158Q5M9N0 1113 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 ANKRD45Q5TZF3 282 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 TBC1D9Q6ZT07 1266 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 CENPQQ7L2Z9 268 aaPredicted RBP9.39□□□□□ -0.91
NPAS3-213ENST00000552874 SAMD7Q7Z3H4 446 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 ADGRA1Q86SQ6 560 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 SKAP1Q86WV1 359 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 FBXW7Q969H0 707 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 ECHDC1Q9NTX5 307 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 GNL3LQ9NVN8 582 aaKnown RBP9.39□□□□□ -0.91
NPAS3-213ENST00000552874 SERPINA10Q9UK55 444 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 DAGLAQ9Y4D2 1042 aa9.39□□□□□ -0.91
NPAS3-213ENST00000552874 COL2A1P02458 1487 aaPredicted RBP9.39□□□□□ -0.91
NPAS3-213ENST00000552874 MROH7-TTC4A0A0A0MT08 1334 aa9.38□□□□□ -0.91
NPAS3-213ENST00000552874 G3V3G9 751 aa9.38□□□□□ -0.91
NPAS3-213ENST00000552874 WNT10BO00744 389 aa9.38□□□□□ -0.91
NPAS3-213ENST00000552874 CHGBP05060 677 aa9.38□□□□□ -0.91
NPAS3-213ENST00000552874 CRKP46108 304 aa9.38□□□□□ -0.91
NPAS3-213ENST00000552874 MECOMQ03112 1051 aa9.38□□□□□ -0.91
NPAS3-213ENST00000552874 NBPF9Q3BBW0 867 aa9.38□□□□□ -0.91
NPAS3-213ENST00000552874 TBC1D10BQ4KMP7 808 aaPredicted RBP9.38□□□□□ -0.91
NPAS3-213ENST00000552874 DCAF8Q5TAQ9 597 aa9.38□□□□□ -0.91
NPAS3-213ENST00000552874 B4GALNT3Q6L9W6 998 aa9.38□□□□□ -0.91
NPAS3-213ENST00000552874 APOBEC3HQ6NTF7 200 aaKnown RBP9.38□□□□□ -0.91
NPAS3-213ENST00000552874 HHIPL2Q6UWX4 724 aa9.38□□□□□ -0.91
NPAS3-213ENST00000552874 USP50Q70EL3 339 aaPredicted RBP9.38□□□□□ -0.91
NPAS3-213ENST00000552874 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
NPAS3-213ENST00000552874 ZDHHC15Q96MV8 337 aa9.38□□□□□ -0.91
NPAS3-213ENST00000552874 MRIQ9BWK5 157 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms