RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 HSCBQ8IWL3 235 aa12.2□□□□□ -0.46
MMP19-209ENST00000552872 CCDC173Q0VFZ6 552 aa12.2□□□□□ -0.46
MMP19-209ENST00000552872 ZNF804AQ7Z570 1209 aa12.2□□□□□ -0.46
MMP19-209ENST00000552872 ZHX1Q9UKY1 873 aaPredicted RBP12.2□□□□□ -0.46
MMP19-209ENST00000552872 SNED1Q8TER0 1413 aa12.2□□□□□ -0.46
MMP19-209ENST00000552872 RAD17O75943 681 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 PTMSP20962 102 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 CHMLP26374 656 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 NMIQ13287 307 aaPredicted RBP12.19□□□□□ -0.46
MMP19-209ENST00000552872 SECISBP2LQ93073 1101 aaKnown RBP12.19□□□□□ -0.46
MMP19-209ENST00000552872 ECE2O60344 883 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 CDC45O75419 566 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 MSNP26038 577 aaKnown RBP12.19□□□□□ -0.46
MMP19-209ENST00000552872 SKOR2Q2VWA4 1001 aaPredicted RBP12.19□□□□□ -0.46
MMP19-209ENST00000552872 TMC4Q7Z404 712 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 ADGRA1Q86SQ6 560 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 LARGE2Q8N3Y3 721 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 EVI5LQ96CN4 794 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 TMEM51Q9NW97 253 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 LRP2BPQ9P2M1 347 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 AOX1Q06278 1338 aa12.19□□□□□ -0.46
MMP19-209ENST00000552872 YDJCA8MPS7 323 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 UQCRFS1P1P0C7P4 283 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 DDIT3P35638 169 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 SLC9C2Q5TAH2 1124 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 ZNF589Q86UQ0 364 aaPredicted RBP12.18□□□□□ -0.46
MMP19-209ENST00000552872 MAGEB6Q8N7X4 407 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 MIGA1Q8NAN2 632 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 ZNF384Q8TF68 577 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 GBP4Q96PP9 640 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 PPP1R9BQ96SB3 815 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 DIAPH3Q9NSV4 1193 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 GNL3LQ9NVN8 582 aaKnown RBP12.18□□□□□ -0.46
MMP19-209ENST00000552872 RAI14Q9P0K7 980 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 MED23Q9ULK4 1368 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 DIXDC1Q155Q3 683 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 MTERF4Q7Z6M4 381 aaKnown RBP12.18□□□□□ -0.46
MMP19-209ENST00000552872 TAOK3Q9H2K8 898 aa12.18□□□□□ -0.46
MMP19-209ENST00000552872 R3HCC1Q9Y3T6 440 aaKnown RBP12.18□□□□□ -0.46
MMP19-209ENST00000552872 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
MMP19-209ENST00000552872 CERS5Q8N5B7 392 aa12.17□□□□□ -0.46
MMP19-209ENST00000552872 KBTBD3Q8NAB2 608 aa12.17□□□□□ -0.46
MMP19-209ENST00000552872 TDRD7Q8NHU6 1098 aaKnown RBP12.17□□□□□ -0.46
MMP19-209ENST00000552872 ZBTB12Q9Y330 459 aaPredicted RBP12.17□□□□□ -0.46
MMP19-209ENST00000552872 PCDHAC2Q9Y5I4 1007 aa12.17□□□□□ -0.46
MMP19-209ENST00000552872 ADAMTSL1Q8N6G6 1762 aa12.17□□□□□ -0.46
MMP19-209ENST00000552872 MYH7P12883 1935 aa12.17□□□□□ -0.46
MMP19-209ENST00000552872 M0R2C6 588 aa12.16□□□□□ -0.46
MMP19-209ENST00000552872 SCNN1DP51172 638 aa12.16□□□□□ -0.46
MMP19-209ENST00000552872 MFSD14BQ5SR56 506 aa12.16□□□□□ -0.46
MMP19-209ENST00000552872 TTLL5Q6EMB2 1281 aa12.16□□□□□ -0.46
MMP19-209ENST00000552872 RTKN2Q8IZC4 609 aa12.16□□□□□ -0.46
MMP19-209ENST00000552872 ARID3AQ99856 593 aa12.16□□□□□ -0.46
MMP19-209ENST00000552872 PUS7LQ9H0K6 701 aaKnown RBP12.16□□□□□ -0.46
MMP19-209ENST00000552872 PRDM10Q9NQV6 1147 aa12.16□□□□□ -0.46
MMP19-209ENST00000552872 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
MMP19-209ENST00000552872 ZNF532Q9HCE3 1301 aa12.16□□□□□ -0.46
MMP19-209ENST00000552872 SLC4A8Q2Y0W8 1093 aa12.16□□□□□ -0.46
MMP19-209ENST00000552872 VPS53Q5VIR6 699 aa12.16□□□□□ -0.46
MMP19-209ENST00000552872 OSBP2Q969R2 916 aa12.16□□□□□ -0.46
MMP19-209ENST00000552872 UQCRHLA0A096LP55 91 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 UQCRHP07919 91 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 KIAA2012Q0VF49 1180 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 GPR162Q16538 588 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 TNPO1Q92973 898 aaKnown RBP12.15□□□□□ -0.46
MMP19-209ENST00000552872 ZNF830Q96NB3 372 aaPredicted RBP12.15□□□□□ -0.46
MMP19-209ENST00000552872 EYA3Q99504 573 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 RTFDC1Q9BY42 306 aaPredicted RBP12.15□□□□□ -0.46
MMP19-209ENST00000552872 DENND2AQ9ULE3 1009 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 SHTN1A0MZ66 631 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 IL1R1P14778 569 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 PDE6AP16499 860 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 MECOMQ03112 1051 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 DMTNQ08495 405 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 KIAA0825Q8IV33 1275 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 ANP32BQ92688 251 aaKnown RBP12.15□□□□□ -0.46
MMP19-209ENST00000552872 ESYT1Q9BSJ8 1104 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 ANO2Q9NQ90 1003 aa12.15□□□□□ -0.46
MMP19-209ENST00000552872 ARFGEF1Q9Y6D6 1849 aa12.14□□□□□ -0.47
MMP19-209ENST00000552872 IARSP41252 1262 aaKnown RBP12.14□□□□□ -0.47
MMP19-209ENST00000552872 NASPP49321 788 aaPredicted RBP12.14□□□□□ -0.47
MMP19-209ENST00000552872 PTH1RQ03431 593 aa12.14□□□□□ -0.47
MMP19-209ENST00000552872 COA1Q9GZY4 146 aa12.14□□□□□ -0.47
MMP19-209ENST00000552872 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
MMP19-209ENST00000552872 SCAF8Q9UPN6 1271 aaKnown RBP12.14□□□□□ -0.47
MMP19-209ENST00000552872 DYNLL1P63167 89 aaKnown RBP12.14□□□□□ -0.47
MMP19-209ENST00000552872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.14□□□□□ -0.47
MMP19-209ENST00000552872 ZNF512BQ96KM6 892 aaPredicted RBP12.14□□□□□ -0.47
MMP19-209ENST00000552872 MAST3O60307 1309 aa12.13□□□□□ -0.47
MMP19-209ENST00000552872 DOCK2Q92608 1830 aa12.13□□□□□ -0.47
MMP19-209ENST00000552872 RNF113AO15541 343 aaKnown RBP12.13□□□□□ -0.47
MMP19-209ENST00000552872 CYP7A1P22680 504 aa12.13□□□□□ -0.47
MMP19-209ENST00000552872 RAB3GAP1Q15042 981 aa12.13□□□□□ -0.47
MMP19-209ENST00000552872 DZIP1Q86YF9 867 aaKnown RBP12.13□□□□□ -0.47
MMP19-209ENST00000552872 STK11IPQ8N1F8 1099 aa12.13□□□□□ -0.47
MMP19-209ENST00000552872 SNX21Q969T3 373 aa12.13□□□□□ -0.47
MMP19-209ENST00000552872 PSMD1Q99460 953 aa12.13□□□□□ -0.47
MMP19-209ENST00000552872 ARMT1Q9H993 441 aa12.13□□□□□ -0.47
MMP19-209ENST00000552872 MYH2Q9UKX2 1941 aa12.13□□□□□ -0.47
MMP19-209ENST00000552872 PSMD14O00487 310 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms