RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 CSF1RP07333 972 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 HOXD10P28358 340 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 CTGFP29279 349 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 PSMC4P43686 418 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 NEXNQ0ZGT2 675 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 GPR153Q6NV75 609 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 UBE3BQ7Z3V4 1068 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 PI4KAP1Q8N8J0 262 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 TRIM47Q96LD4 638 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 CHMP4AQ9BY43 222 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 SERPINA10Q9UK55 444 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 RIPOR2Q9Y4F9 1068 aa15.33■□□□□ 0.04
PTCH1-222ENST00000551425 FARP2O94887 1054 aaPredicted RBP15.32■□□□□ 0.04
PTCH1-222ENST00000551425 OSBPP22059 807 aa15.32■□□□□ 0.04
PTCH1-222ENST00000551425 SNAPC2Q13487 334 aa15.32■□□□□ 0.04
PTCH1-222ENST00000551425 CWF19L2Q2TBE0 894 aaKnown RBP15.32■□□□□ 0.04
PTCH1-222ENST00000551425 CCDC30Q5VVM6 783 aa15.32■□□□□ 0.04
PTCH1-222ENST00000551425 ERO1BQ86YB8 467 aa15.32■□□□□ 0.04
PTCH1-222ENST00000551425 RAET1EQ8TD07 263 aa15.32■□□□□ 0.04
PTCH1-222ENST00000551425 TMEM39BQ9GZU3 492 aa15.32■□□□□ 0.04
PTCH1-222ENST00000551425 RNF208Q9H0X6 261 aa15.32■□□□□ 0.04
PTCH1-222ENST00000551425 TDRD3Q9H7E2 651 aaKnown RBP15.32■□□□□ 0.04
PTCH1-222ENST00000551425 SNCAIPQ9Y6H5 919 aa15.32■□□□□ 0.04
PTCH1-222ENST00000551425 IRF6O14896 467 aa15.31■□□□□ 0.04
PTCH1-222ENST00000551425 TAF5LO75529 589 aa15.31■□□□□ 0.04
PTCH1-222ENST00000551425 TNNI2P48788 182 aa15.31■□□□□ 0.04
PTCH1-222ENST00000551425 DZIP1LQ8IYY4 767 aaKnown RBP15.31■□□□□ 0.04
PTCH1-222ENST00000551425 U2AF1L4Q8WU68 220 aaKnown RBP15.31■□□□□ 0.04
PTCH1-222ENST00000551425 IFT57Q9NWB7 429 aa15.31■□□□□ 0.04
PTCH1-222ENST00000551425 FAM205AQ6ZU69 1335 aa15.31■□□□□ 0.04
PTCH1-222ENST00000551425 LAMA3Q16787 3333 aa15.3■□□□□ 0.04
PTCH1-222ENST00000551425 TCP10L2B9ZVM9 353 aa15.3■□□□□ 0.04
PTCH1-222ENST00000551425 EVI5O60447 810 aa15.3■□□□□ 0.04
PTCH1-222ENST00000551425 CAPN2P17655 700 aa15.3■□□□□ 0.04
PTCH1-222ENST00000551425 UBXN2AP68543 259 aa15.3■□□□□ 0.04
PTCH1-222ENST00000551425 PPIL2Q13356 520 aa15.3■□□□□ 0.04
PTCH1-222ENST00000551425 C8orf58Q8NAV2 365 aa15.3■□□□□ 0.04
PTCH1-222ENST00000551425 JAG2Q9Y219 1238 aa15.3■□□□□ 0.04
PTCH1-222ENST00000551425 MYPNQ86TC9 1320 aa15.29■□□□□ 0.04
PTCH1-222ENST00000551425 ADGRA2Q96PE1 1338 aa15.29■□□□□ 0.04
PTCH1-222ENST00000551425 FMNL1O95466 1100 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-222ENST00000551425 CASP7P55210 303 aa15.29■□□□□ 0.04
PTCH1-222ENST00000551425 GNAI1P63096 354 aa15.29■□□□□ 0.04
PTCH1-222ENST00000551425 RALBP1Q15311 655 aa15.29■□□□□ 0.04
PTCH1-222ENST00000551425 BIN2Q9UBW5 565 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-222ENST00000551425 STAP2Q9UGK3 403 aa15.29■□□□□ 0.04
PTCH1-222ENST00000551425 CPA4Q9UI42 421 aa15.29■□□□□ 0.04
PTCH1-222ENST00000551425 TTF2Q9UNY4 1162 aaKnown RBP15.29■□□□□ 0.04
PTCH1-222ENST00000551425 STXBP5LQ9Y2K9 1186 aa15.29■□□□□ 0.04
PTCH1-222ENST00000551425 ANKRD18BA2A2Z9 1011 aa15.28■□□□□ 0.04
PTCH1-222ENST00000551425 SGPL1O95470 568 aa15.28■□□□□ 0.04
PTCH1-222ENST00000551425 BMP8BP34820 402 aa15.28■□□□□ 0.04
PTCH1-222ENST00000551425 GCKRQ14397 625 aa15.28■□□□□ 0.04
PTCH1-222ENST00000551425 MFSD14BQ5SR56 506 aa15.28■□□□□ 0.04
PTCH1-222ENST00000551425 ANKRD23Q86SG2 305 aa15.28■□□□□ 0.04
PTCH1-222ENST00000551425 ARAP2Q8WZ64 1704 aa15.28■□□□□ 0.04
PTCH1-222ENST00000551425 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
PTCH1-222ENST00000551425 CALD1Q05682 793 aaKnown RBP15.27■□□□□ 0.04
PTCH1-222ENST00000551425 PPATQ06203 517 aa15.27■□□□□ 0.04
PTCH1-222ENST00000551425 DEFB123Q8N688 67 aa15.27■□□□□ 0.04
PTCH1-222ENST00000551425 SLAIN1Q8ND83 568 aa15.27■□□□□ 0.04
PTCH1-222ENST00000551425 ZKSCAN4Q969J2 545 aaPredicted RBP15.27■□□□□ 0.04
PTCH1-222ENST00000551425 WRNIP1Q96S55 665 aa15.27■□□□□ 0.04
PTCH1-222ENST00000551425 UNC93B1Q9H1C4 597 aa15.27■□□□□ 0.04
PTCH1-222ENST00000551425 CRKP46108 304 aa15.26■□□□□ 0.03
PTCH1-222ENST00000551425 PRKCZQ05513 592 aa15.26■□□□□ 0.03
PTCH1-222ENST00000551425 TDRD7Q8NHU6 1098 aaKnown RBP15.26■□□□□ 0.03
PTCH1-222ENST00000551425 HOOK2Q96ED9 719 aa15.26■□□□□ 0.03
PTCH1-222ENST00000551425 GDF15Q99988 308 aa15.26■□□□□ 0.03
PTCH1-222ENST00000551425 PDHXO00330 501 aa15.25■□□□□ 0.03
PTCH1-222ENST00000551425 IFIT5Q13325 482 aaKnown RBP15.25■□□□□ 0.03
PTCH1-222ENST00000551425 COL25A1Q9BXS0 654 aaPredicted RBP15.25■□□□□ 0.03
PTCH1-222ENST00000551425 ADAMTS8Q9UP79 889 aa15.25■□□□□ 0.03
PTCH1-222ENST00000551425 FCGRTP55899 365 aa15.24■□□□□ 0.03
PTCH1-222ENST00000551425 HDLBPQ00341 1268 aaKnown RBP15.24■□□□□ 0.03
PTCH1-222ENST00000551425 WDR43Q15061 677 aaKnown RBP eCLIP15.24■□□□□ 0.03
PTCH1-222ENST00000551425 LRIT3Q3SXY7 679 aa15.24■□□□□ 0.03
PTCH1-222ENST00000551425 FAM83AQ86UY5 434 aa15.24■□□□□ 0.03
PTCH1-222ENST00000551425 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.24■□□□□ 0.03
PTCH1-222ENST00000551425 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
PTCH1-222ENST00000551425 KCNH4Q9UQ05 1017 aa15.24■□□□□ 0.03
PTCH1-222ENST00000551425 TFRCP02786 760 aaKnown RBP15.23■□□□□ 0.03
PTCH1-222ENST00000551425 BCRP11274 1271 aa15.23■□□□□ 0.03
PTCH1-222ENST00000551425 MOGSQ13724 837 aa15.23■□□□□ 0.03
PTCH1-222ENST00000551425 FKBP1CQ5VVH2 108 aa15.23■□□□□ 0.03
PTCH1-222ENST00000551425 TSPYL6Q8N831 410 aa15.23■□□□□ 0.03
PTCH1-222ENST00000551425 STK31Q9BXU1 1019 aa15.23■□□□□ 0.03
PTCH1-222ENST00000551425 MTMR10Q9NXD2 777 aa15.23■□□□□ 0.03
PTCH1-222ENST00000551425 A0A1B0GUL6 1792 aa15.22■□□□□ 0.03
PTCH1-222ENST00000551425 ADCY3O60266 1144 aa15.22■□□□□ 0.03
PTCH1-222ENST00000551425 HIBADHP31937 336 aaKnown RBP15.22■□□□□ 0.03
PTCH1-222ENST00000551425 CACNB3P54284 484 aa15.22■□□□□ 0.03
PTCH1-222ENST00000551425 FOXO4P98177 505 aa15.22■□□□□ 0.03
PTCH1-222ENST00000551425 DCAF15Q66K64 600 aa15.22■□□□□ 0.03
PTCH1-222ENST00000551425 Q7L0L9 218 aa15.22■□□□□ 0.03
PTCH1-222ENST00000551425 PXYLP1Q8TE99 480 aa15.22■□□□□ 0.03
PTCH1-222ENST00000551425 PARK7Q99497 189 aaKnown RBP15.22■□□□□ 0.03
PTCH1-222ENST00000551425 CRISPLD2Q9H0B8 497 aa15.22■□□□□ 0.03
PTCH1-222ENST00000551425 PAK6Q9NQU5 681 aaPredicted RBP15.22■□□□□ 0.03
PTCH1-222ENST00000551425 GABRQQ9UN88 632 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms