RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 CERS5Q8N5B7 392 aa12.01□□□□□ -0.49
GCN1-205ENST00000548821 CSADQ9Y600 493 aa12.01□□□□□ -0.49
GCN1-205ENST00000548821 GPR25O00155 361 aa12□□□□□ -0.49
GCN1-205ENST00000548821 SNAP23O00161 211 aa12□□□□□ -0.49
GCN1-205ENST00000548821 SEMA3EO15041 775 aa12□□□□□ -0.49
GCN1-205ENST00000548821 CIAO1O76071 339 aa12□□□□□ -0.49
GCN1-205ENST00000548821 KCNA4P22459 653 aa12□□□□□ -0.49
GCN1-205ENST00000548821 IL15P40933 162 aaPredicted RBP12□□□□□ -0.49
GCN1-205ENST00000548821 CHAF1AQ13111 956 aaPredicted RBP12□□□□□ -0.49
GCN1-205ENST00000548821 DCAF15Q66K64 600 aa12□□□□□ -0.49
GCN1-205ENST00000548821 MOB2Q70IA6 237 aa12□□□□□ -0.49
GCN1-205ENST00000548821 PUS3Q9BZE2 481 aaKnown RBP12□□□□□ -0.49
GCN1-205ENST00000548821 ZNF70Q9UC06 446 aaPredicted RBP12□□□□□ -0.49
GCN1-205ENST00000548821 TBC1D8O95759 1140 aa11.99□□□□□ -0.49
GCN1-205ENST00000548821 HHIPL2Q6UWX4 724 aa11.99□□□□□ -0.49
GCN1-205ENST00000548821 FAM83AQ86UY5 434 aa11.99□□□□□ -0.49
GCN1-205ENST00000548821 ERO1AQ96HE7 468 aa11.99□□□□□ -0.49
GCN1-205ENST00000548821 KAZALD1Q96I82 304 aa11.99□□□□□ -0.49
GCN1-205ENST00000548821 SCAF8Q9UPN6 1271 aaKnown RBP11.99□□□□□ -0.49
GCN1-205ENST00000548821 AKAP2Q9Y2D5 859 aa11.99□□□□□ -0.49
GCN1-205ENST00000548821 POLR2AP24928 1970 aaKnown RBP11.99□□□□□ -0.49
GCN1-205ENST00000548821 GTF2A2P52657 109 aa11.98□□□□□ -0.49
GCN1-205ENST00000548821 MAP3K9P80192 1104 aa11.98□□□□□ -0.49
GCN1-205ENST00000548821 MKRN3Q13064 507 aaKnown RBP11.98□□□□□ -0.49
GCN1-205ENST00000548821 LRRC24Q50LG9 513 aa11.98□□□□□ -0.49
GCN1-205ENST00000548821 NBPF12Q5TAG4 269 aaPredicted RBP11.98□□□□□ -0.49
GCN1-205ENST00000548821 INTS3Q68E01 1043 aaKnown RBP11.98□□□□□ -0.49
GCN1-205ENST00000548821 FBXO46Q6PJ61 603 aaPredicted RBP11.98□□□□□ -0.49
GCN1-205ENST00000548821 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
GCN1-205ENST00000548821 IFNL1Q8IU54 200 aa11.98□□□□□ -0.49
GCN1-205ENST00000548821 TRMT2AQ8IZ69 625 aaKnown RBP11.98□□□□□ -0.49
GCN1-205ENST00000548821 ANKRD44Q8N8A2 993 aa11.98□□□□□ -0.49
GCN1-205ENST00000548821 ZNF296Q8WUU4 475 aaPredicted RBP11.98□□□□□ -0.49
GCN1-205ENST00000548821 WNK4Q96J92 1243 aa11.98□□□□□ -0.49
GCN1-205ENST00000548821 ZDHHC15Q96MV8 337 aa11.98□□□□□ -0.49
GCN1-205ENST00000548821 TDRD3Q9H7E2 651 aaKnown RBP11.98□□□□□ -0.49
GCN1-205ENST00000548821 DENND2AQ9ULE3 1009 aa11.98□□□□□ -0.49
GCN1-205ENST00000548821 NOB1Q9ULX3 412 aaKnown RBP11.98□□□□□ -0.49
GCN1-205ENST00000548821 JAG2Q9Y219 1238 aa11.98□□□□□ -0.49
GCN1-205ENST00000548821 TCP10L2B9ZVM9 353 aa11.97□□□□□ -0.49
GCN1-205ENST00000548821 USP2O75604 605 aaPredicted RBP11.97□□□□□ -0.49
GCN1-205ENST00000548821 BCAMP50895 628 aa11.97□□□□□ -0.49
GCN1-205ENST00000548821 SPTY2D1Q68D10 685 aaPredicted RBP11.97□□□□□ -0.49
GCN1-205ENST00000548821 AKAP11Q9UKA4 1901 aa11.96□□□□□ -0.49
GCN1-205ENST00000548821 SPEF2Q9C093 1822 aa11.96□□□□□ -0.49
GCN1-205ENST00000548821 ZBTB22O15209 634 aa11.96□□□□□ -0.49
GCN1-205ENST00000548821 LDHBP07195 334 aaKnown RBP11.96□□□□□ -0.49
GCN1-205ENST00000548821 ATP2B3Q16720 1220 aa11.96□□□□□ -0.49
GCN1-205ENST00000548821 VGLL2Q8N8G2 317 aa11.96□□□□□ -0.49
GCN1-205ENST00000548821 ZFYVE28Q9HCC9 887 aa11.96□□□□□ -0.49
GCN1-205ENST00000548821 ZCCHC17Q9NP64 241 aaKnown RBP11.96□□□□□ -0.49
GCN1-205ENST00000548821 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.96□□□□□ -0.49
GCN1-205ENST00000548821 TESPA1A2RU30 521 aaPredicted RBP11.95□□□□□ -0.5
GCN1-205ENST00000548821 FGFR2P21802 821 aa11.95□□□□□ -0.5
GCN1-205ENST00000548821 KIF22Q14807 665 aa11.95□□□□□ -0.5
GCN1-205ENST00000548821 OPTNQ96CV9 577 aa11.95□□□□□ -0.5
GCN1-205ENST00000548821 COPRSQ9NQ92 184 aa11.95□□□□□ -0.5
GCN1-205ENST00000548821 IQSEC3Q9UPP2 1182 aaPredicted RBP11.95□□□□□ -0.5
GCN1-205ENST00000548821 CETPP11597 493 aa11.94□□□□□ -0.5
GCN1-205ENST00000548821 MVPQ14764 893 aaKnown RBP11.94□□□□□ -0.5
GCN1-205ENST00000548821 GORABQ5T7V8 394 aa11.94□□□□□ -0.5
GCN1-205ENST00000548821 NBPF11Q86T75 865 aa11.94□□□□□ -0.5
GCN1-205ENST00000548821 ERO1BQ86YB8 467 aa11.94□□□□□ -0.5
GCN1-205ENST00000548821 FAM151AQ8WW52 585 aa11.94□□□□□ -0.5
GCN1-205ENST00000548821 CDCA7LQ96GN5 454 aa11.94□□□□□ -0.5
GCN1-205ENST00000548821 ZNF341Q9BYN7 854 aa11.94□□□□□ -0.5
GCN1-205ENST00000548821 HPS5Q9UPZ3 1129 aa11.94□□□□□ -0.5
GCN1-205ENST00000548821 SALL1Q9NSC2 1324 aa11.93□□□□□ -0.5
GCN1-205ENST00000548821 IGSF3O75054 1194 aa11.93□□□□□ -0.5
GCN1-205ENST00000548821 MAP4K4O95819 1239 aaPredicted RBP11.93□□□□□ -0.5
GCN1-205ENST00000548821 GNRH1P01148 92 aa11.93□□□□□ -0.5
GCN1-205ENST00000548821 RFX5P48382 616 aaPredicted RBP11.93□□□□□ -0.5
GCN1-205ENST00000548821 RARSP54136 660 aaKnown RBP11.93□□□□□ -0.5
GCN1-205ENST00000548821 SP3Q02447 781 aa11.93□□□□□ -0.5
GCN1-205ENST00000548821 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
GCN1-205ENST00000548821 KLHDC4Q8TBB5 520 aa11.93□□□□□ -0.5
GCN1-205ENST00000548821 TMEM39BQ9GZU3 492 aa11.93□□□□□ -0.5
GCN1-205ENST00000548821 SIL1Q9H173 461 aa11.93□□□□□ -0.5
GCN1-205ENST00000548821 ELP3Q9H9T3 547 aa11.93□□□□□ -0.5
GCN1-205ENST00000548821 SRGAP3O43295 1099 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 GNAI2P04899 355 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 LDHCP07864 332 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 GSTO1P78417 241 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 PPATQ06203 517 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 G3BP1Q13283 466 aaKnown RBP eCLIP11.92□□□□□ -0.54e-7■■□□□ 13.8
GCN1-205ENST00000548821 APOBEC3HQ6NTF7 200 aaKnown RBP11.92□□□□□ -0.5
GCN1-205ENST00000548821 ATG9AQ7Z3C6 839 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.92□□□□□ -0.5
GCN1-205ENST00000548821 CLMNQ96JQ2 1002 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 TEPSINQ96N21 525 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 WRNIP1Q96S55 665 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 EFCC1Q9HA90 598 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 TRIM17Q9Y577 477 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 LRRFIP2Q9Y608 721 aaKnown RBP11.92□□□□□ -0.5
GCN1-205ENST00000548821 CASP8AP2Q9UKL3 1982 aa11.92□□□□□ -0.5
GCN1-205ENST00000548821 PDS5AQ29RF7 1337 aaKnown RBP11.91□□□□□ -0.5
GCN1-205ENST00000548821 CCL15-CCL14A0A0B4J2E2 113 aa11.91□□□□□ -0.5
GCN1-205ENST00000548821 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
GCN1-205ENST00000548821 VGLL4Q14135 290 aa11.91□□□□□ -0.5
GCN1-205ENST00000548821 CCL15Q16663 113 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms