RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 MEIS3Q99687 375 aa14.17□□□□□ -0.14
BEST3-209ENST00000548658 MRIQ9BWK5 157 aa14.17□□□□□ -0.14
BEST3-209ENST00000548658 GNL3LQ9NVN8 582 aaKnown RBP14.17□□□□□ -0.14
BEST3-209ENST00000548658 SAGE1Q9NXZ1 904 aa14.17□□□□□ -0.14
BEST3-209ENST00000548658 MAST3O60307 1309 aa14.16□□□□□ -0.14
BEST3-209ENST00000548658 UNCXA6NJT0 531 aa14.16□□□□□ -0.14
BEST3-209ENST00000548658 UBE2Q2LH0YL09 131 aa14.16□□□□□ -0.14
BEST3-209ENST00000548658 BCAR3O75815 825 aa14.16□□□□□ -0.14
BEST3-209ENST00000548658 WDR66Q8TBY9 1149 aa14.16□□□□□ -0.14
BEST3-209ENST00000548658 SIL1Q9H173 461 aa14.16□□□□□ -0.14
BEST3-209ENST00000548658 SRGAP3O43295 1099 aa14.15□□□□□ -0.14
BEST3-209ENST00000548658 GNAI2P04899 355 aa14.15□□□□□ -0.14
BEST3-209ENST00000548658 CRKP46108 304 aa14.15□□□□□ -0.14
BEST3-209ENST00000548658 CHAF1AQ13111 956 aaPredicted RBP14.15□□□□□ -0.14
BEST3-209ENST00000548658 MTX1Q13505 466 aa14.15□□□□□ -0.14
BEST3-209ENST00000548658 RASAL3Q86YV0 1011 aa14.15□□□□□ -0.14
BEST3-209ENST00000548658 DZIP1LQ8IYY4 767 aaKnown RBP14.15□□□□□ -0.14
BEST3-209ENST00000548658 TEKT1Q969V4 418 aa14.15□□□□□ -0.14
BEST3-209ENST00000548658 ZIC5Q96T25 663 aa14.15□□□□□ -0.14
BEST3-209ENST00000548658 VEZTQ9HBM0 779 aa14.15□□□□□ -0.14
BEST3-209ENST00000548658 IQSEC3Q9UPP2 1182 aaPredicted RBP14.15□□□□□ -0.14
BEST3-209ENST00000548658 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.15
BEST3-209ENST00000548658 CLRN2A0PK11 232 aa14.14□□□□□ -0.15
BEST3-209ENST00000548658 TNNI2P48788 182 aa14.14□□□□□ -0.15
BEST3-209ENST00000548658 ATP2B3Q16720 1220 aa14.14□□□□□ -0.15
BEST3-209ENST00000548658 SPDYE2Q495Y8 402 aa14.14□□□□□ -0.15
BEST3-209ENST00000548658 MOB2Q70IA6 237 aa14.14□□□□□ -0.15
BEST3-209ENST00000548658 CSRNP1Q96S65 589 aa14.14□□□□□ -0.15
BEST3-209ENST00000548658 ANGEL1Q9UNK9 670 aaKnown RBP14.14□□□□□ -0.15
BEST3-209ENST00000548658 AKAP2Q9Y2D5 859 aa14.14□□□□□ -0.15
BEST3-209ENST00000548658 SEMA3EO15041 775 aa14.13□□□□□ -0.15
BEST3-209ENST00000548658 RASA3Q14644 834 aa14.13□□□□□ -0.15
BEST3-209ENST00000548658 MAP3K11Q16584 847 aa14.13□□□□□ -0.15
BEST3-209ENST00000548658 LDLRAD1Q5T700 205 aa14.13□□□□□ -0.15
BEST3-209ENST00000548658 CLUAP1Q96AJ1 413 aa14.13□□□□□ -0.15
BEST3-209ENST00000548658 ZNF70Q9UC06 446 aaPredicted RBP14.13□□□□□ -0.15
BEST3-209ENST00000548658 PCDHAC2Q9Y5I4 1007 aa14.13□□□□□ -0.15
BEST3-209ENST00000548658 IREB2P48200 963 aaKnown RBP14.12□□□□□ -0.15
BEST3-209ENST00000548658 HHIPL2Q6UWX4 724 aa14.12□□□□□ -0.15
BEST3-209ENST00000548658 FTSJ3Q8IY81 847 aaKnown RBP14.12□□□□□ -0.15
BEST3-209ENST00000548658 ZDHHC15Q96MV8 337 aa14.12□□□□□ -0.15
BEST3-209ENST00000548658 TDRD3Q9H7E2 651 aaKnown RBP14.12□□□□□ -0.15
BEST3-209ENST00000548658 RNF186Q9NXI6 227 aa14.12□□□□□ -0.15
BEST3-209ENST00000548658 TMOD2Q9NZR1 351 aa14.12□□□□□ -0.15
BEST3-209ENST00000548658 TSKSQ9UJT2 592 aa14.12□□□□□ -0.15
BEST3-209ENST00000548658 DENND2AQ9ULE3 1009 aa14.12□□□□□ -0.15
BEST3-209ENST00000548658 ECM29Q5VYK3 1845 aa14.12□□□□□ -0.15
BEST3-209ENST00000548658 TRPA1O75762 1119 aa14.11□□□□□ -0.15
BEST3-209ENST00000548658 INHBEP58166 350 aa14.11□□□□□ -0.15
BEST3-209ENST00000548658 SREBF2Q12772 1141 aa14.11□□□□□ -0.15
BEST3-209ENST00000548658 PRKG1Q13976 671 aa14.11□□□□□ -0.15
BEST3-209ENST00000548658 ZGPATQ8N5A5 531 aaKnown RBP14.11□□□□□ -0.15
BEST3-209ENST00000548658 HOOK2Q96ED9 719 aa14.11□□□□□ -0.15
BEST3-209ENST00000548658 SLC10A4Q96EP9 437 aa14.11□□□□□ -0.15
BEST3-209ENST00000548658 PA2G4Q9UQ80 394 aaKnown RBP14.11□□□□□ -0.15
BEST3-209ENST00000548658 TM4SF4P48230 202 aa14.1□□□□□ -0.15
BEST3-209ENST00000548658 NBPF12Q5TAG4 269 aaPredicted RBP14.1□□□□□ -0.15
BEST3-209ENST00000548658 FKBP1CQ5VVH2 108 aa14.1□□□□□ -0.15
BEST3-209ENST00000548658 TMEM57Q8N5G2 664 aa14.1□□□□□ -0.15
BEST3-209ENST00000548658 ARAP2Q8WZ64 1704 aa14.1□□□□□ -0.15
BEST3-209ENST00000548658 AKAP11Q9UKA4 1901 aa14.09□□□□□ -0.15
BEST3-209ENST00000548658 ZBTB48P10074 688 aaPredicted RBP14.09□□□□□ -0.15
BEST3-209ENST00000548658 MS4A1P11836 297 aa14.09□□□□□ -0.15
BEST3-209ENST00000548658 G3BP1Q13283 466 aaKnown RBP eCLIP14.09□□□□□ -0.15
BEST3-209ENST00000548658 MVPQ14764 893 aaKnown RBP14.09□□□□□ -0.15
BEST3-209ENST00000548658 GRIK5Q16478 980 aa14.09□□□□□ -0.15
BEST3-209ENST00000548658 SPRYD7Q5W111 196 aa14.09□□□□□ -0.15
BEST3-209ENST00000548658 FAM83AQ86UY5 434 aa14.09□□□□□ -0.15
BEST3-209ENST00000548658 ANKRD13AQ8IZ07 590 aa14.09□□□□□ -0.15
BEST3-209ENST00000548658 SALL1Q9NSC2 1324 aa14.09□□□□□ -0.15
BEST3-209ENST00000548658 MANSC4A6NHS7 340 aaPredicted RBP14.08□□□□□ -0.16
BEST3-209ENST00000548658 TCP10L2B9ZVM9 353 aa14.08□□□□□ -0.16
BEST3-209ENST00000548658 USP2O75604 605 aaPredicted RBP14.08□□□□□ -0.16
BEST3-209ENST00000548658 ALDH1A1P00352 501 aa14.08□□□□□ -0.16
BEST3-209ENST00000548658 LDHBP07195 334 aaKnown RBP14.08□□□□□ -0.16
BEST3-209ENST00000548658 TIMM10P62072 90 aa14.08□□□□□ -0.16
BEST3-209ENST00000548658 CCDC102BQ68D86 513 aa14.08□□□□□ -0.16
BEST3-209ENST00000548658 APOBEC3HQ6NTF7 200 aaKnown RBP14.08□□□□□ -0.16
BEST3-209ENST00000548658 AOX1Q06278 1338 aa14.08□□□□□ -0.16
BEST3-209ENST00000548658 PDS5AQ29RF7 1337 aaKnown RBP14.08□□□□□ -0.16
BEST3-209ENST00000548658 A0A1B0GUL7 405 aa14.07□□□□□ -0.16
BEST3-209ENST00000548658 PHKA1P46020 1223 aa14.07□□□□□ -0.16
BEST3-209ENST00000548658 TFCP2Q12800 502 aa14.07□□□□□ -0.16
BEST3-209ENST00000548658 SPTY2D1Q68D10 685 aaPredicted RBP14.07□□□□□ -0.16
BEST3-209ENST00000548658 SLF2Q8IX21 1173 aa14.07□□□□□ -0.16
BEST3-209ENST00000548658 ABHD8Q96I13 439 aa14.07□□□□□ -0.16
BEST3-209ENST00000548658 TNNQ9UQP3 1299 aa14.07□□□□□ -0.16
BEST3-209ENST00000548658 ATP8B2P98198 1209 aa14.06□□□□□ -0.16
BEST3-209ENST00000548658 NOM1Q5C9Z4 860 aaKnown RBP14.06□□□□□ -0.16
BEST3-209ENST00000548658 GORABQ5T7V8 394 aa14.06□□□□□ -0.16
BEST3-209ENST00000548658 ITPRIPQ8IWB1 547 aa14.06□□□□□ -0.16
BEST3-209ENST00000548658 XAGE2Q96GT9 111 aa14.06□□□□□ -0.16
BEST3-209ENST00000548658 TEPSINQ96N21 525 aa14.06□□□□□ -0.16
BEST3-209ENST00000548658 NEUROD6Q96NK8 337 aa14.06□□□□□ -0.16
BEST3-209ENST00000548658 TMEM39BQ9GZU3 492 aa14.06□□□□□ -0.16
BEST3-209ENST00000548658 CASP8AP2Q9UKL3 1982 aa14.05□□□□□ -0.16
BEST3-209ENST00000548658 PNMA6EA0A0J9YXQ4 647 aa14.05□□□□□ -0.16
BEST3-209ENST00000548658 ZBTB7BO15156 539 aaPredicted RBP14.05□□□□□ -0.16
BEST3-209ENST00000548658 ADORA1P30542 326 aa14.05□□□□□ -0.16
BEST3-209ENST00000548658 MKRN3Q13064 507 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms