RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 INTS3Q68E01 1043 aaKnown RBP20.1■□□□□ 0.81
RAPGEF3-217ENST00000548434 FBXO3Q9UK99 471 aa20.1■□□□□ 0.81
RAPGEF3-217ENST00000548434 MYO1BO43795 1136 aa20.09■□□□□ 0.81
RAPGEF3-217ENST00000548434 CIAO1O76071 339 aa20.09■□□□□ 0.81
RAPGEF3-217ENST00000548434 APOBEC3HQ6NTF7 200 aaKnown RBP20.09■□□□□ 0.81
RAPGEF3-217ENST00000548434 MEIS3Q99687 375 aa20.09■□□□□ 0.81
RAPGEF3-217ENST00000548434 CENPFP49454 3210 aa20.08■□□□□ 0.81
RAPGEF3-217ENST00000548434 TBC1D8O95759 1140 aa20.08■□□□□ 0.81
RAPGEF3-217ENST00000548434 MKRN3Q13064 507 aaKnown RBP20.08■□□□□ 0.81
RAPGEF3-217ENST00000548434 SUPT20HL1Q3ZLR7 823 aa20.08■□□□□ 0.81
RAPGEF3-217ENST00000548434 TBC1D22AQ8WUA7 517 aa20.08■□□□□ 0.81
RAPGEF3-217ENST00000548434 WNK4Q96J92 1243 aa20.08■□□□□ 0.81
RAPGEF3-217ENST00000548434 ZDHHC15Q96MV8 337 aa20.08■□□□□ 0.81
RAPGEF3-217ENST00000548434 API5Q9BZZ5 524 aaKnown RBP20.08■□□□□ 0.81
RAPGEF3-217ENST00000548434 VEZTQ9HBM0 779 aa20.08■□□□□ 0.81
RAPGEF3-217ENST00000548434 SUGT1Q9Y2Z0 365 aa20.08■□□□□ 0.81
RAPGEF3-217ENST00000548434 UBTFL1P0CB47 393 aaPredicted RBP20.07■□□□□ 0.8
RAPGEF3-217ENST00000548434 CAVIN4Q5BKX8 364 aa20.07■□□□□ 0.8
RAPGEF3-217ENST00000548434 ZNF296Q8WUU4 475 aaPredicted RBP20.07■□□□□ 0.8
RAPGEF3-217ENST00000548434 LPIN2Q92539 896 aa20.07■□□□□ 0.8
RAPGEF3-217ENST00000548434 SLC10A4Q96EP9 437 aa20.07■□□□□ 0.8
RAPGEF3-217ENST00000548434 COPRSQ9NQ92 184 aa20.07■□□□□ 0.8
RAPGEF3-217ENST00000548434 LRRFIP2Q9Y608 721 aaKnown RBP20.07■□□□□ 0.8
RAPGEF3-217ENST00000548434 TESPA1A2RU30 521 aaPredicted RBP20.06■□□□□ 0.8
RAPGEF3-217ENST00000548434 CCDC85CA6NKD9 419 aa20.06■□□□□ 0.8
RAPGEF3-217ENST00000548434 PPP1R12BO60237 982 aaPredicted RBP20.06■□□□□ 0.8
RAPGEF3-217ENST00000548434 ZBTB48P10074 688 aaPredicted RBP20.06■□□□□ 0.8
RAPGEF3-217ENST00000548434 RBM5P52756 815 aaKnown RBP eCLIP20.06■□□□□ 0.8
RAPGEF3-217ENST00000548434 CHAF1AQ13111 956 aaPredicted RBP20.06■□□□□ 0.8
RAPGEF3-217ENST00000548434 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.06■□□□□ 0.8
RAPGEF3-217ENST00000548434 TNNQ9UQP3 1299 aa20.06■□□□□ 0.8
RAPGEF3-217ENST00000548434 GPR25O00155 361 aa20.05■□□□□ 0.8
RAPGEF3-217ENST00000548434 IFIT1P09914 478 aaKnown RBP20.05■□□□□ 0.8
RAPGEF3-217ENST00000548434 MTX1Q13505 466 aa20.05■□□□□ 0.8
RAPGEF3-217ENST00000548434 CTU1Q7Z7A3 348 aaKnown RBP20.05■□□□□ 0.8
RAPGEF3-217ENST00000548434 TMEM39BQ9GZU3 492 aa20.05■□□□□ 0.8
RAPGEF3-217ENST00000548434 PA2G4Q9UQ80 394 aaKnown RBP20.05■□□□□ 0.8
RAPGEF3-217ENST00000548434 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.05■□□□□ 0.8
RAPGEF3-217ENST00000548434 IGF2BP3O00425 579 aaKnown RBP eCLIP20.04■□□□□ 0.8
RAPGEF3-217ENST00000548434 SREBF2Q12772 1141 aa20.04■□□□□ 0.8
RAPGEF3-217ENST00000548434 FKBP1CQ5VVH2 108 aa20.04■□□□□ 0.8
RAPGEF3-217ENST00000548434 HHIPL2Q6UWX4 724 aa20.04■□□□□ 0.8
RAPGEF3-217ENST00000548434 VPS37DQ86XT2 251 aa20.04■□□□□ 0.8
RAPGEF3-217ENST00000548434 IFNL1Q8IU54 200 aa20.04■□□□□ 0.8
RAPGEF3-217ENST00000548434 MS4A4AQ96JQ5 239 aa20.04■□□□□ 0.8
RAPGEF3-217ENST00000548434 PTPN18Q99952 460 aa20.04■□□□□ 0.8
RAPGEF3-217ENST00000548434 MANSC4A6NHS7 340 aaPredicted RBP20.03■□□□□ 0.8
RAPGEF3-217ENST00000548434 TCP10L2B9ZVM9 353 aa20.03■□□□□ 0.8
RAPGEF3-217ENST00000548434 INHBEP58166 350 aa20.03■□□□□ 0.8
RAPGEF3-217ENST00000548434 TNFAIP1Q13829 316 aa20.03■□□□□ 0.8
RAPGEF3-217ENST00000548434 BCAR3O75815 825 aa20.02■□□□□ 0.8
RAPGEF3-217ENST00000548434 SLC5A1P13866 664 aa20.02■□□□□ 0.8
RAPGEF3-217ENST00000548434 TRIM27P14373 513 aa20.02■□□□□ 0.8
RAPGEF3-217ENST00000548434 CACNB3P54284 484 aa20.02■□□□□ 0.8
RAPGEF3-217ENST00000548434 FAM83AQ86UY5 434 aa20.02■□□□□ 0.8
RAPGEF3-217ENST00000548434 ANKRD13AQ8IZ07 590 aa20.02■□□□□ 0.8
RAPGEF3-217ENST00000548434 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.02■□□□□ 0.8
RAPGEF3-217ENST00000548434 TEKT1Q969V4 418 aa20.02■□□□□ 0.8
RAPGEF3-217ENST00000548434 SIL1Q9H173 461 aa20.02■□□□□ 0.8
RAPGEF3-217ENST00000548434 IL15P40933 162 aaPredicted RBP20.01■□□□□ 0.79
RAPGEF3-217ENST00000548434 PHKA1P46020 1223 aa20.01■□□□□ 0.79
RAPGEF3-217ENST00000548434 IREB2P48200 963 aaKnown RBP20.01■□□□□ 0.79
RAPGEF3-217ENST00000548434 ATP2B3Q16720 1220 aa20.01■□□□□ 0.79
RAPGEF3-217ENST00000548434 WDR66Q8TBY9 1149 aa20.01■□□□□ 0.79
RAPGEF3-217ENST00000548434 CEP126Q9P2H0 1117 aa20.01■□□□□ 0.79
RAPGEF3-217ENST00000548434 SALL1Q9NSC2 1324 aa20.01■□□□□ 0.79
RAPGEF3-217ENST00000548434 MKI67P46013 3256 aaKnown RBP20■□□□□ 0.79
RAPGEF3-217ENST00000548434 MYH2Q9UKX2 1941 aa20■□□□□ 0.79
RAPGEF3-217ENST00000548434 ADORA1P30542 326 aa20■□□□□ 0.79
RAPGEF3-217ENST00000548434 CAP1Q01518 475 aa20■□□□□ 0.79
RAPGEF3-217ENST00000548434 CNKSR2Q8WXI2 1034 aa20■□□□□ 0.79
RAPGEF3-217ENST00000548434 PRDX5P30044 214 aa19.99■□□□□ 0.79
RAPGEF3-217ENST00000548434 DAGLAQ9Y4D2 1042 aa19.99■□□□□ 0.79
RAPGEF3-217ENST00000548434 BRCA2P51587 3418 aa19.98■□□□□ 0.79
RAPGEF3-217ENST00000548434 RPAP1Q9BWH6 1393 aaPredicted RBP19.98■□□□□ 0.79
RAPGEF3-217ENST00000548434 FRAT2O75474 233 aaPredicted RBP19.98■□□□□ 0.79
RAPGEF3-217ENST00000548434 ALDH1A1P00352 501 aa19.98■□□□□ 0.79
RAPGEF3-217ENST00000548434 MAP3K9P80192 1104 aa19.98■□□□□ 0.79
RAPGEF3-217ENST00000548434 VGLL4Q14135 290 aa19.98■□□□□ 0.79
RAPGEF3-217ENST00000548434 ATF7IPQ6VMQ6 1270 aa19.98■□□□□ 0.79
RAPGEF3-217ENST00000548434 MIER1Q8N108 512 aa19.98■□□□□ 0.79
RAPGEF3-217ENST00000548434 MAST3O60307 1309 aa19.98■□□□□ 0.79
RAPGEF3-217ENST00000548434 PDE4DIPQ5VU43 2346 aa19.97■□□□□ 0.79
RAPGEF3-217ENST00000548434 GNAI3P08754 354 aa19.97■□□□□ 0.79
RAPGEF3-217ENST00000548434 TNNI2P48788 182 aa19.97■□□□□ 0.79
RAPGEF3-217ENST00000548434 TIMM10P62072 90 aa19.97■□□□□ 0.79
RAPGEF3-217ENST00000548434 DIXDC1Q155Q3 683 aa19.97■□□□□ 0.79
RAPGEF3-217ENST00000548434 PKN2Q16513 984 aaKnown RBP19.97■□□□□ 0.79
RAPGEF3-217ENST00000548434 CDC42EP5Q6NZY7 148 aa19.97■□□□□ 0.79
RAPGEF3-217ENST00000548434 OPTNQ96CV9 577 aa19.97■□□□□ 0.79
RAPGEF3-217ENST00000548434 ELP3Q9H9T3 547 aa19.97■□□□□ 0.79
RAPGEF3-217ENST00000548434 HPS5Q9UPZ3 1129 aa19.97■□□□□ 0.79
RAPGEF3-217ENST00000548434 HDAC5Q9UQL6 1122 aa19.97■□□□□ 0.79
RAPGEF3-217ENST00000548434 SEMA3EO15041 775 aa19.96■□□□□ 0.79
RAPGEF3-217ENST00000548434 FKTNO75072 461 aa19.96■□□□□ 0.79
RAPGEF3-217ENST00000548434 CCDC102BQ68D86 513 aa19.96■□□□□ 0.79
RAPGEF3-217ENST00000548434 ZNF384Q8TF68 577 aa19.96■□□□□ 0.79
RAPGEF3-217ENST00000548434 BRI3BPQ8WY22 251 aa19.96■□□□□ 0.79
RAPGEF3-217ENST00000548434 FAM198AQ9UFP1 575 aa19.96■□□□□ 0.79
RAPGEF3-217ENST00000548434 ZNF112Q9UJU3 913 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms