RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 MYO3BQ8WXR4 1341 aa8.46□□□□□ -1.06
SCAF11-211ENST00000547950 F8W031 263 aaPredicted RBP8.45□□□□□ -1.06
SCAF11-211ENST00000547950 WNT10BO00744 389 aa8.45□□□□□ -1.06
SCAF11-211ENST00000547950 BRPF1P55201 1214 aaPredicted RBP8.45□□□□□ -1.06
SCAF11-211ENST00000547950 KIF23Q02241 960 aaPredicted RBP8.45□□□□□ -1.06
SCAF11-211ENST00000547950 TTLL12Q14166 644 aaPredicted RBP8.45□□□□□ -1.06
SCAF11-211ENST00000547950 VARS2Q5ST30 1063 aaKnown RBP8.45□□□□□ -1.06
SCAF11-211ENST00000547950 ZNF804AQ7Z570 1209 aa8.45□□□□□ -1.06
SCAF11-211ENST00000547950 KAZALD1Q96I82 304 aa8.45□□□□□ -1.06
SCAF11-211ENST00000547950 PUS3Q9BZE2 481 aaKnown RBP8.45□□□□□ -1.06
SCAF11-211ENST00000547950 LRRC37AA6NMS7 1700 aa8.45□□□□□ -1.06
SCAF11-211ENST00000547950 FAM155AB1AL88 458 aaPredicted RBP8.44□□□□□ -1.06
SCAF11-211ENST00000547950 UBE2Q2LH0YL09 131 aa8.44□□□□□ -1.06
SCAF11-211ENST00000547950 CA12O43570 354 aa8.44□□□□□ -1.06
SCAF11-211ENST00000547950 PRKG1Q13976 671 aa8.44□□□□□ -1.06
SCAF11-211ENST00000547950 DLGAP5Q15398 846 aa8.44□□□□□ -1.06
SCAF11-211ENST00000547950 C15orf52Q6ZUT6 534 aaKnown RBP8.44□□□□□ -1.06
SCAF11-211ENST00000547950 BICC1Q9H694 974 aaKnown RBP8.44□□□□□ -1.06
SCAF11-211ENST00000547950 PITPNM2Q9BZ72 1349 aa8.44□□□□□ -1.06
SCAF11-211ENST00000547950 TRPA1O75762 1119 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 IL1R1P14778 569 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 NF2P35240 595 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 GYG1P46976 350 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 MMP14P50281 582 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 RBM5P52756 815 aaKnown RBP eCLIP8.43□□□□□ -1.06
SCAF11-211ENST00000547950 ARSIQ5FYB1 569 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 CERS5Q8N5B7 392 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 ZSWIM6Q9HCJ5 1215 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 SMC4Q9NTJ3 1288 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.43□□□□□ -1.06
SCAF11-211ENST00000547950 RIPOR2Q9Y4F9 1068 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 PTPRCP08575 1304 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 IRS2Q9Y4H2 1338 aa8.43□□□□□ -1.06
SCAF11-211ENST00000547950 SLC10A3P09131 477 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 HIBADHP31937 336 aaKnown RBP8.42□□□□□ -1.06
SCAF11-211ENST00000547950 FKBP1BP68106 108 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 UBE4AQ14139 1066 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 CFAP100Q494V2 611 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 LRRC24Q50LG9 513 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 METTL24Q5JXM2 366 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 GPR153Q6NV75 609 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 VPS37DQ86XT2 251 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 ANKRD44Q8N8A2 993 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 KLHDC4Q8TBB5 520 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 ABHD8Q96I13 439 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 FAM84BQ96KN1 310 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-211ENST00000547950 PRMT6Q96LA8 375 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-211ENST00000547950 CSRNP1Q96S65 589 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 USP44Q9H0E7 712 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 DEFB129Q9H1M3 183 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 NOB1Q9ULX3 412 aaKnown RBP8.42□□□□□ -1.06
SCAF11-211ENST00000547950 IQSEC3Q9UPP2 1182 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-211ENST00000547950 PCDHAC2Q9Y5I4 1007 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 UTYO14607 1347 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 ZNF609O15014 1411 aa8.42□□□□□ -1.06
SCAF11-211ENST00000547950 MROH5Q6ZUA9 1318 aa8.41□□□□□ -1.06
SCAF11-211ENST00000547950 CLRN2A0PK11 232 aa8.41□□□□□ -1.06
SCAF11-211ENST00000547950 C2orf72A6NCS6 295 aa8.41□□□□□ -1.06
SCAF11-211ENST00000547950 CCDC85CA6NKD9 419 aa8.41□□□□□ -1.06
SCAF11-211ENST00000547950 CCER2I3L3R5 266 aa8.41□□□□□ -1.06
SCAF11-211ENST00000547950 MYO1BO43795 1136 aa8.41□□□□□ -1.06
SCAF11-211ENST00000547950 FRAT2O75474 233 aaPredicted RBP8.41□□□□□ -1.06
SCAF11-211ENST00000547950 ALDH1L2Q3SY69 923 aa8.41□□□□□ -1.06
SCAF11-211ENST00000547950 RABL6Q3YEC7 729 aaPredicted RBP8.41□□□□□ -1.06
SCAF11-211ENST00000547950 RASAL3Q86YV0 1011 aa8.41□□□□□ -1.06
SCAF11-211ENST00000547950 APOBEC3FQ8IUX4 373 aaKnown RBP8.41□□□□□ -1.06
SCAF11-211ENST00000547950 TRMT2AQ8IZ69 625 aaKnown RBP8.41□□□□□ -1.06
SCAF11-211ENST00000547950 TDRD7Q8NHU6 1098 aaKnown RBP8.41□□□□□ -1.06
SCAF11-211ENST00000547950 KHSRPQ92945 711 aaKnown RBP eCLIP8.41□□□□□ -1.062e-8■■□□□ 12.2
SCAF11-211ENST00000547950 ZBED3Q96IU2 234 aaPredicted RBP8.41□□□□□ -1.06
SCAF11-211ENST00000547950 VEZTQ9HBM0 779 aa8.41□□□□□ -1.06
SCAF11-211ENST00000547950 RNF186Q9NXI6 227 aa8.41□□□□□ -1.06
SCAF11-211ENST00000547950 FZD1Q9UP38 647 aa8.41□□□□□ -1.06
SCAF11-211ENST00000547950 FKBP1AP62942 108 aaKnown RBP8.4□□□□□ -1.06
SCAF11-211ENST00000547950 PTPN12Q05209 780 aaKnown RBP8.4□□□□□ -1.06
SCAF11-211ENST00000547950 CHAF1AQ13111 956 aaPredicted RBP8.4□□□□□ -1.06
SCAF11-211ENST00000547950 CAVIN4Q5BKX8 364 aa8.4□□□□□ -1.06
SCAF11-211ENST00000547950 MFSD14BQ5SR56 506 aa8.4□□□□□ -1.06
SCAF11-211ENST00000547950 ARMC9Q7Z3E5 817 aa8.4□□□□□ -1.06
SCAF11-211ENST00000547950 MTMR14Q8NCE2 650 aa8.4□□□□□ -1.06
SCAF11-211ENST00000547950 ANGEL1Q9UNK9 670 aaKnown RBP8.4□□□□□ -1.06
SCAF11-211ENST00000547950 TTF2Q9UNY4 1162 aaKnown RBP8.4□□□□□ -1.06
SCAF11-211ENST00000547950 AOX1Q06278 1338 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 FAM205AQ6ZU69 1335 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 PPP1R37O75864 691 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 PDE8BO95263 885 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 BCAMP50895 628 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 DGKZQ13574 1117 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 SUPT20HL1Q3ZLR7 823 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 FBXO33Q7Z6M2 555 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 SLC10A4Q96EP9 437 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 MCOLN1Q9GZU1 580 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 TDRD3Q9H7E2 651 aaKnown RBP8.39□□□□□ -1.07
SCAF11-211ENST00000547950 SAGE1Q9NXZ1 904 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 SCN9AQ15858 1988 aa8.39□□□□□ -1.07
SCAF11-211ENST00000547950 TBC1D8O95759 1140 aa8.38□□□□□ -1.07
SCAF11-211ENST00000547950 IFIT1P09914 478 aaKnown RBP8.38□□□□□ -1.07
SCAF11-211ENST00000547950 CT47B1P0C2W7 299 aaPredicted RBP8.38□□□□□ -1.07
SCAF11-211ENST00000547950 UBTFL1P0CB47 393 aaPredicted RBP8.38□□□□□ -1.07
SCAF11-211ENST00000547950 RASA3Q14644 834 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms