RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 ERICH6Q7L0X2 663 aa28.2■■■□□ 2.1
SMARCD1-203ENST00000547247 LRP2BPQ9P2M1 347 aa28.2■■■□□ 2.1
SMARCD1-203ENST00000547247 MAST3O60307 1309 aa28.19■■■□□ 2.1
SMARCD1-203ENST00000547247 OSBPL3Q9H4L5 887 aa28.19■■■□□ 2.1
SMARCD1-203ENST00000547247 ANTXR1Q9H6X2 564 aa28.19■■■□□ 2.1
SMARCD1-203ENST00000547247 ADARB2Q9NS39 739 aaKnown RBP28.19■■■□□ 2.1
SMARCD1-203ENST00000547247 PAG1Q9NWQ8 432 aa28.19■■■□□ 2.1
SMARCD1-203ENST00000547247 AOX1Q06278 1338 aa28.18■■■□□ 2.1
SMARCD1-203ENST00000547247 GOLIM4O00461 696 aa28.18■■■□□ 2.1
SMARCD1-203ENST00000547247 EPHX2P34913 555 aa28.18■■■□□ 2.1
SMARCD1-203ENST00000547247 TAF1DQ9H5J8 278 aaPredicted RBP28.17■■■□□ 2.1
SMARCD1-203ENST00000547247 PIH1D3Q9NQM4 214 aaKnown RBP28.17■■■□□ 2.1
SMARCD1-203ENST00000547247 SAMD7Q7Z3H4 446 aa28.16■■■□□ 2.1
SMARCD1-203ENST00000547247 DZIP1Q86YF9 867 aaKnown RBP28.16■■■□□ 2.1
SMARCD1-203ENST00000547247 EDC3Q96F86 508 aaKnown RBP28.16■■■□□ 2.1
SMARCD1-203ENST00000547247 MYOZ2Q9NPC6 264 aa28.16■■■□□ 2.1
SMARCD1-203ENST00000547247 RAI14Q9P0K7 980 aa28.16■■■□□ 2.1
SMARCD1-203ENST00000547247 HDLBPQ00341 1268 aaKnown RBP28.16■■■□□ 2.1
SMARCD1-203ENST00000547247 MRIQ9BWK5 157 aa28.16■■■□□ 2.1
SMARCD1-203ENST00000547247 SERPINA10Q9UK55 444 aa28.16■■■□□ 2.1
SMARCD1-203ENST00000547247 IGSF3O75054 1194 aa28.15■■■□□ 2.1
SMARCD1-203ENST00000547247 TBC1D10BQ4KMP7 808 aaPredicted RBP28.15■■■□□ 2.1
SMARCD1-203ENST00000547247 RBM26Q5T8P6 1007 aaKnown RBP28.15■■■□□ 2.1
SMARCD1-203ENST00000547247 IDH1O75874 414 aaKnown RBP28.14■■■□□ 2.1
SMARCD1-203ENST00000547247 USP50Q70EL3 339 aaPredicted RBP28.14■■■□□ 2.1
SMARCD1-203ENST00000547247 PNMA8AQ86V59 439 aaPredicted RBP28.14■■■□□ 2.1
SMARCD1-203ENST00000547247 TOMM70O94826 608 aa28.13■■■□□ 2.09
SMARCD1-203ENST00000547247 CRKP46108 304 aa28.13■■■□□ 2.09
SMARCD1-203ENST00000547247 RBM5P52756 815 aaKnown RBP eCLIP28.13■■■□□ 2.09
SMARCD1-203ENST00000547247 MECOMQ03112 1051 aa28.13■■■□□ 2.09
SMARCD1-203ENST00000547247 MAP3K12Q12852 859 aa28.13■■■□□ 2.09
SMARCD1-203ENST00000547247 KIF4BQ2VIQ3 1234 aa28.13■■■□□ 2.09
SMARCD1-203ENST00000547247 TRPM4Q8TD43 1214 aa28.13■■■□□ 2.09
SMARCD1-203ENST00000547247 TEKT1Q969V4 418 aa28.13■■■□□ 2.09
SMARCD1-203ENST00000547247 DLGAP5Q15398 846 aa28.12■■■□□ 2.09
SMARCD1-203ENST00000547247 CFAP100Q494V2 611 aa28.12■■■□□ 2.09
SMARCD1-203ENST00000547247 SLF2Q8IX21 1173 aa28.12■■■□□ 2.09
SMARCD1-203ENST00000547247 NSUN4Q96CB9 384 aaKnown RBP28.12■■■□□ 2.09
SMARCD1-203ENST00000547247 MAP4K4O95819 1239 aaPredicted RBP28.11■■■□□ 2.09
SMARCD1-203ENST00000547247 EGFRP00533 1210 aa28.11■■■□□ 2.09
SMARCD1-203ENST00000547247 DIXDC1Q155Q3 683 aa28.11■■■□□ 2.09
SMARCD1-203ENST00000547247 HHIPL2Q6UWX4 724 aa28.11■■■□□ 2.09
SMARCD1-203ENST00000547247 MTMR14Q8NCE2 650 aa28.11■■■□□ 2.09
SMARCD1-203ENST00000547247 GSTO1P78417 241 aa28.11■■■□□ 2.09
SMARCD1-203ENST00000547247 EAPPQ56P03 285 aaPredicted RBP28.11■■■□□ 2.09
SMARCD1-203ENST00000547247 MYO5AQ9Y4I1 1855 aaKnown RBP28.1■■■□□ 2.09
SMARCD1-203ENST00000547247 DOCK2Q92608 1830 aa28.09■■■□□ 2.09
SMARCD1-203ENST00000547247 LDHCP07864 332 aa28.09■■■□□ 2.09
SMARCD1-203ENST00000547247 HIRAP54198 1017 aaPredicted RBP28.09■■■□□ 2.09
SMARCD1-203ENST00000547247 NAA16Q6N069 864 aaPredicted RBP28.09■■■□□ 2.09
SMARCD1-203ENST00000547247 KBTBD3Q8NAB2 608 aa28.09■■■□□ 2.09
SMARCD1-203ENST00000547247 ZNF384Q8TF68 577 aa28.09■■■□□ 2.09
SMARCD1-203ENST00000547247 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.09■■■□□ 2.09
SMARCD1-203ENST00000547247 SPDYE2BA6NHP3 402 aa28.08■■■□□ 2.09
SMARCD1-203ENST00000547247 WNT10BO00744 389 aa28.08■■■□□ 2.09
SMARCD1-203ENST00000547247 SPDYE6P0CI01 402 aa28.08■■■□□ 2.09
SMARCD1-203ENST00000547247 C1QTNF8P60827 252 aa28.08■■■□□ 2.09
SMARCD1-203ENST00000547247 FAM163AQ96GL9 167 aaPredicted RBP28.08■■■□□ 2.09
SMARCD1-203ENST00000547247 ZBED3Q96IU2 234 aaPredicted RBP28.08■■■□□ 2.09
SMARCD1-203ENST00000547247 ZDHHC15Q96MV8 337 aa28.08■■■□□ 2.09
SMARCD1-203ENST00000547247 PCDHAC2Q9Y5I4 1007 aa28.08■■■□□ 2.09
SMARCD1-203ENST00000547247 GTF3C3Q9Y5Q9 886 aa28.08■■■□□ 2.09
SMARCD1-203ENST00000547247 NBPF9Q3BBW0 867 aa28.07■■■□□ 2.08
SMARCD1-203ENST00000547247 TMED8Q6PL24 325 aaPredicted RBP28.07■■■□□ 2.08
SMARCD1-203ENST00000547247 SKAP1Q86WV1 359 aa28.07■■■□□ 2.08
SMARCD1-203ENST00000547247 RBM46Q8TBY0 533 aaKnown RBP28.07■■■□□ 2.08
SMARCD1-203ENST00000547247 PRMT6Q96LA8 375 aaPredicted RBP28.07■■■□□ 2.08
SMARCD1-203ENST00000547247 DAGLAQ9Y4D2 1042 aa28.07■■■□□ 2.08
SMARCD1-203ENST00000547247 SLC9C2Q5TAH2 1124 aa28.07■■■□□ 2.08
SMARCD1-203ENST00000547247 MAGEB6Q8N7X4 407 aa28.07■■■□□ 2.08
SMARCD1-203ENST00000547247 EVI5LQ96CN4 794 aa28.07■■■□□ 2.08
SMARCD1-203ENST00000547247 MROH7-TTC4A0A0A0MT08 1334 aa28.06■■■□□ 2.08
SMARCD1-203ENST00000547247 GAKO14976 1311 aa28.06■■■□□ 2.08
SMARCD1-203ENST00000547247 MYH2Q9UKX2 1941 aa28.06■■■□□ 2.08
SMARCD1-203ENST00000547247 TRIM6-TRIM34B2RNG4 842 aa28.06■■■□□ 2.08
SMARCD1-203ENST00000547247 POTEIP0CG38 1075 aa28.06■■■□□ 2.08
SMARCD1-203ENST00000547247 POTEJP0CG39 1038 aa28.06■■■□□ 2.08
SMARCD1-203ENST00000547247 TTC22Q5TAA0 569 aa28.06■■■□□ 2.08
SMARCD1-203ENST00000547247 MAST2Q6P0Q8 1798 aa28.06■■■□□ 2.08
SMARCD1-203ENST00000547247 MYO1BO43795 1136 aa28.05■■■□□ 2.08
SMARCD1-203ENST00000547247 CYP7A1P22680 504 aa28.05■■■□□ 2.08
SMARCD1-203ENST00000547247 RGS3P49796 1198 aa28.05■■■□□ 2.08
SMARCD1-203ENST00000547247 ZSCAN25Q6NSZ9 544 aa28.05■■■□□ 2.08
SMARCD1-203ENST00000547247 CNTROBQ8N137 903 aa28.05■■■□□ 2.08
SMARCD1-203ENST00000547247 ZC3H15Q8WU90 426 aaKnown RBP28.05■■■□□ 2.08
SMARCD1-203ENST00000547247 CLEC11AQ9Y240 323 aa28.05■■■□□ 2.08
SMARCD1-203ENST00000547247 ADAMTSL1Q8N6G6 1762 aa28.05■■■□□ 2.08
SMARCD1-203ENST00000547247 PDE6AP16499 860 aa28.04■■■□□ 2.08
SMARCD1-203ENST00000547247 APOBEC3HQ6NTF7 200 aaKnown RBP28.04■■■□□ 2.08
SMARCD1-203ENST00000547247 LDHDQ86WU2 507 aa28.04■■■□□ 2.08
SMARCD1-203ENST00000547247 FSD1Q9BTV5 496 aa28.04■■■□□ 2.08
SMARCD1-203ENST00000547247 LRRFIP1Q32MZ4 808 aaKnown RBP28.03■■■□□ 2.08
SMARCD1-203ENST00000547247 RILPL2Q969X0 211 aa28.03■■■□□ 2.08
SMARCD1-203ENST00000547247 ADD2P35612 726 aa28.03■■■□□ 2.08
SMARCD1-203ENST00000547247 ZNF532Q9HCE3 1301 aa28.02■■■□□ 2.08
SMARCD1-203ENST00000547247 GPR75-ASB3A0A0A6YYF3 556 aa28.02■■■□□ 2.08
SMARCD1-203ENST00000547247 SMC1BQ8NDV3 1235 aa28.02■■■□□ 2.08
SMARCD1-203ENST00000547247 NOL10Q9BSC4 688 aaKnown RBP28.02■■■□□ 2.08
SMARCD1-203ENST00000547247 TDRD3Q9H7E2 651 aaKnown RBP28.02■■■□□ 2.08
SMARCD1-203ENST00000547247 PGAP2Q9UHJ9 254 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms