RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 MYOZ2Q9NPC6 264 aa9.43□□□□□ -0.9
KDM1B-203ENST00000546309 ANKIB1Q9P2G1 1089 aa9.43□□□□□ -0.9
KDM1B-203ENST00000546309 ECM29Q5VYK3 1845 aa9.42□□□□□ -0.9
KDM1B-203ENST00000546309 USP17L3A6NCW0 530 aa9.42□□□□□ -0.9
KDM1B-203ENST00000546309 USP17L4A6NCW7 530 aa9.42□□□□□ -0.9
KDM1B-203ENST00000546309 RGS19P49795 217 aa9.42□□□□□ -0.9
KDM1B-203ENST00000546309 RGMBQ6NW40 437 aa9.42□□□□□ -0.9
KDM1B-203ENST00000546309 USP17L1Q7RTZ2 530 aa9.42□□□□□ -0.9
KDM1B-203ENST00000546309 OTUD7AQ8TE49 926 aaPredicted RBP9.42□□□□□ -0.9
KDM1B-203ENST00000546309 RNF186Q9NXI6 227 aa9.42□□□□□ -0.9
KDM1B-203ENST00000546309 OTOFQ9HC10 1997 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 ZNF804BA4D1E1 1349 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 UBE2Q2LH0YL09 131 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 EYA2O00167 538 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 ERC2O15083 957 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 EPB41L2O43491 1005 aaKnown RBP9.41□□□□□ -0.9
KDM1B-203ENST00000546309 CDC45O75419 566 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 GLRX3O76003 335 aaKnown RBP9.41□□□□□ -0.9
KDM1B-203ENST00000546309 USP17L8P0C7I0 530 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 OS9Q13438 667 aaPredicted RBP9.41□□□□□ -0.9
KDM1B-203ENST00000546309 CCDC57Q2TAC2 916 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 C15orf52Q6ZUT6 534 aaKnown RBP9.41□□□□□ -0.9
KDM1B-203ENST00000546309 ATG9AQ7Z3C6 839 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 PODNQ7Z5L7 613 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 PI4K2BQ8TCG2 481 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 CCDC102AQ96A19 550 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 EYA3Q99504 573 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 CD209Q9NNX6 404 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 PA2G4Q9UQ80 394 aaKnown RBP9.41□□□□□ -0.9
KDM1B-203ENST00000546309 JAG2Q9Y219 1238 aa9.41□□□□□ -0.9
KDM1B-203ENST00000546309 SDSP20132 328 aa9.4□□□□□ -0.9
KDM1B-203ENST00000546309 GJA5P36382 358 aa9.4□□□□□ -0.9
KDM1B-203ENST00000546309 ZNF157P51786 506 aaPredicted RBP9.4□□□□□ -0.9
KDM1B-203ENST00000546309 IFIT5Q13325 482 aaKnown RBP9.4□□□□□ -0.9
KDM1B-203ENST00000546309 STRIP1Q5VSL9 837 aa9.4□□□□□ -0.9
KDM1B-203ENST00000546309 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
KDM1B-203ENST00000546309 VGLL2Q8N8G2 317 aa9.4□□□□□ -0.9
KDM1B-203ENST00000546309 EAF2Q96CJ1 260 aaPredicted RBP9.4□□□□□ -0.9
KDM1B-203ENST00000546309 GPATCH3Q96I76 525 aa9.4□□□□□ -0.9
KDM1B-203ENST00000546309 PRMT6Q96LA8 375 aaPredicted RBP9.4□□□□□ -0.9
KDM1B-203ENST00000546309 UPF2Q9HAU5 1272 aaKnown RBP9.4□□□□□ -0.9
KDM1B-203ENST00000546309 IL1RAPL2Q9NP60 686 aa9.4□□□□□ -0.9
KDM1B-203ENST00000546309 ECHDC1Q9NTX5 307 aa9.4□□□□□ -0.9
KDM1B-203ENST00000546309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.4□□□□□ -0.9
KDM1B-203ENST00000546309 PDE4DIPQ5VU43 2346 aa9.4□□□□□ -0.9
KDM1B-203ENST00000546309 APBB1O00213 710 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 SEC24BO95487 1268 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 IFIT2P09913 472 aaKnown RBP9.39□□□□□ -0.91
KDM1B-203ENST00000546309 SOX10P56693 466 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 GTF2IP78347 998 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 LDLRAD1Q5T700 205 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 TBC1D9Q6ZT07 1266 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 KIAA0825Q8IV33 1275 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 KLHDC4Q8TBB5 520 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 CDC5LQ99459 802 aaKnown RBP9.39□□□□□ -0.91
KDM1B-203ENST00000546309 COA1Q9GZY4 146 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 SAGE1Q9NXZ1 904 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 PCDH10Q9P2E7 1040 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 LEMD3Q9Y2U8 911 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 RIPOR2Q9Y4F9 1068 aa9.39□□□□□ -0.91
KDM1B-203ENST00000546309 ZSWIM8A7E2V4 1837 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 MKI67P46013 3256 aaKnown RBP9.38□□□□□ -0.91
KDM1B-203ENST00000546309 PITPNM2Q9BZ72 1349 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 ANKRD18BA2A2Z9 1011 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 TRPA1O75762 1119 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 IL1R1P14778 569 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 ANP32AP39687 249 aaKnown RBP9.38□□□□□ -0.91
KDM1B-203ENST00000546309 RBM25P49756 843 aaKnown RBP9.38□□□□□ -0.91
KDM1B-203ENST00000546309 LRRC24Q50LG9 513 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 TNNI3KQ59H18 835 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 CASC1Q6TDU7 716 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 AACSQ86V21 672 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 IL27Q8NEV9 243 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.38□□□□□ -0.91
KDM1B-203ENST00000546309 CLMNQ96JQ2 1002 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 FAM84BQ96KN1 310 aaPredicted RBP9.38□□□□□ -0.91
KDM1B-203ENST00000546309 TBC1D32Q96NH3 1257 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 AKAP2Q9Y2D5 859 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 FPGT-TNNI3KV9GXZ4 949 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 ARAP2Q8WZ64 1704 aa9.38□□□□□ -0.91
KDM1B-203ENST00000546309 COL1A1P02452 1464 aaPredicted RBP9.38□□□□□ -0.91
KDM1B-203ENST00000546309 CENPFP49454 3210 aa9.37□□□□□ -0.91
KDM1B-203ENST00000546309 ATP5JP18859 108 aa9.37□□□□□ -0.91
KDM1B-203ENST00000546309 TFCP2Q12800 502 aa9.37□□□□□ -0.91
KDM1B-203ENST00000546309 TTLL5Q6EMB2 1281 aa9.37□□□□□ -0.91
KDM1B-203ENST00000546309 TDRD7Q8NHU6 1098 aaKnown RBP9.37□□□□□ -0.91
KDM1B-203ENST00000546309 TEPSINQ96N21 525 aa9.37□□□□□ -0.91
KDM1B-203ENST00000546309 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
KDM1B-203ENST00000546309 HDAC9Q9UKV0 1011 aa9.37□□□□□ -0.91
KDM1B-203ENST00000546309 BRCA2P51587 3418 aa9.37□□□□□ -0.91
KDM1B-203ENST00000546309 ZBTB22O15209 634 aa9.36□□□□□ -0.91
KDM1B-203ENST00000546309 TBC1D8O95759 1140 aa9.36□□□□□ -0.91
KDM1B-203ENST00000546309 GYG1P46976 350 aa9.36□□□□□ -0.91
KDM1B-203ENST00000546309 TTLL12Q14166 644 aaPredicted RBP9.36□□□□□ -0.91
KDM1B-203ENST00000546309 NBPF12Q5TAG4 269 aaPredicted RBP9.36□□□□□ -0.91
KDM1B-203ENST00000546309 MTMR14Q8NCE2 650 aa9.36□□□□□ -0.91
KDM1B-203ENST00000546309 CNKSR2Q8WXI2 1034 aa9.36□□□□□ -0.91
KDM1B-203ENST00000546309 EVI5LQ96CN4 794 aa9.36□□□□□ -0.91
KDM1B-203ENST00000546309 DDRGK1Q96HY6 314 aa9.36□□□□□ -0.91
KDM1B-203ENST00000546309 ZNF512BQ96KM6 892 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms