RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 HDLBPQ00341 1268 aaKnown RBP25■■□□□ 1.59
HMGA2-211ENST00000545998 OTUD7AQ8TE49 926 aaPredicted RBP25■■□□□ 1.59
HMGA2-211ENST00000545998 ZC3H15Q8WU90 426 aaKnown RBP25■■□□□ 1.59
HMGA2-211ENST00000545998 MRIQ9BWK5 157 aa25■■□□□ 1.59
HMGA2-211ENST00000545998 ECHDC1Q9NTX5 307 aa25■■□□□ 1.59
HMGA2-211ENST00000545998 PGAP2Q9UHJ9 254 aa25■■□□□ 1.59
HMGA2-211ENST00000545998 NDUFB9Q9Y6M9 179 aa25■■□□□ 1.59
HMGA2-211ENST00000545998 ECM29Q5VYK3 1845 aa25■■□□□ 1.59
HMGA2-211ENST00000545998 MYH2Q9UKX2 1941 aa24.99■■□□□ 1.59
HMGA2-211ENST00000545998 CFAP100Q494V2 611 aa24.99■■□□□ 1.59
HMGA2-211ENST00000545998 SPTY2D1Q68D10 685 aaPredicted RBP24.99■■□□□ 1.59
HMGA2-211ENST00000545998 CHD1LQ86WJ1 897 aa24.99■■□□□ 1.59
HMGA2-211ENST00000545998 CLEC11AQ9Y240 323 aa24.99■■□□□ 1.59
HMGA2-211ENST00000545998 PCDHAC2Q9Y5I4 1007 aa24.99■■□□□ 1.59
HMGA2-211ENST00000545998 SALL3Q9BXA9 1300 aa24.99■■□□□ 1.59
HMGA2-211ENST00000545998 WNT10BO00744 389 aa24.98■■□□□ 1.59
HMGA2-211ENST00000545998 CRKP46108 304 aa24.98■■□□□ 1.59
HMGA2-211ENST00000545998 DLGAP5Q15398 846 aa24.98■■□□□ 1.59
HMGA2-211ENST00000545998 NBPF9Q3BBW0 867 aa24.98■■□□□ 1.59
HMGA2-211ENST00000545998 CHADLQ6NUI6 762 aa24.98■■□□□ 1.59
HMGA2-211ENST00000545998 GPATCH3Q96I76 525 aa24.98■■□□□ 1.59
HMGA2-211ENST00000545998 LNPKQ9C0E8 428 aa24.98■■□□□ 1.59
HMGA2-211ENST00000545998 DOCK2Q92608 1830 aa24.98■■□□□ 1.59
HMGA2-211ENST00000545998 ERICH6Q7L0X2 663 aa24.97■■□□□ 1.59
HMGA2-211ENST00000545998 SMC1BQ8NDV3 1235 aa24.97■■□□□ 1.59
HMGA2-211ENST00000545998 ASTN2O75129 1339 aaPredicted RBP24.97■■□□□ 1.59
HMGA2-211ENST00000545998 TTC41PQ6P2S7 1318 aa24.97■■□□□ 1.59
HMGA2-211ENST00000545998 SPDYE2BA6NHP3 402 aa24.97■■□□□ 1.59
HMGA2-211ENST00000545998 SPDYE6P0CI01 402 aa24.97■■□□□ 1.59
HMGA2-211ENST00000545998 TSHZ3Q63HK5 1081 aa24.97■■□□□ 1.59
HMGA2-211ENST00000545998 TEKT1Q969V4 418 aa24.97■■□□□ 1.59
HMGA2-211ENST00000545998 BOLA2Q9H3K6 86 aa24.97■■□□□ 1.59
HMGA2-211ENST00000545998 PIH1D3Q9NQM4 214 aaKnown RBP24.97■■□□□ 1.59
HMGA2-211ENST00000545998 RBM5P52756 815 aaKnown RBP eCLIP24.96■■□□□ 1.59
HMGA2-211ENST00000545998 HHIPL2Q6UWX4 724 aa24.96■■□□□ 1.59
HMGA2-211ENST00000545998 PRMT6Q96LA8 375 aaPredicted RBP24.96■■□□□ 1.59
HMGA2-211ENST00000545998 HAUS7Q99871 368 aa24.96■■□□□ 1.59
HMGA2-211ENST00000545998 ANTXR1Q9H6X2 564 aa24.96■■□□□ 1.59
HMGA2-211ENST00000545998 MAST2Q6P0Q8 1798 aa24.95■■□□□ 1.58
HMGA2-211ENST00000545998 MX1P20591 662 aa24.95■■□□□ 1.58
HMGA2-211ENST00000545998 MECOMQ03112 1051 aa24.95■■□□□ 1.58
HMGA2-211ENST00000545998 DIXDC1Q155Q3 683 aa24.95■■□□□ 1.58
HMGA2-211ENST00000545998 MAP1SQ66K74 1059 aaPredicted RBP24.95■■□□□ 1.58
HMGA2-211ENST00000545998 DZIP1Q86YF9 867 aaKnown RBP24.95■■□□□ 1.58
HMGA2-211ENST00000545998 ZNF384Q8TF68 577 aa24.95■■□□□ 1.58
HMGA2-211ENST00000545998 LRP2BPQ9P2M1 347 aa24.95■■□□□ 1.58
HMGA2-211ENST00000545998 FSTL1Q12841 308 aa24.94■■□□□ 1.58
HMGA2-211ENST00000545998 NSUN4Q96CB9 384 aaKnown RBP24.94■■□□□ 1.58
HMGA2-211ENST00000545998 ZDHHC15Q96MV8 337 aa24.94■■□□□ 1.58
HMGA2-211ENST00000545998 DNAJC2Q99543 621 aaKnown RBP24.94■■□□□ 1.58
HMGA2-211ENST00000545998 RAI14Q9P0K7 980 aa24.94■■□□□ 1.58
HMGA2-211ENST00000545998 AOX1Q06278 1338 aa24.94■■□□□ 1.58
HMGA2-211ENST00000545998 ERICH6BQ5W0A0 696 aa24.93■■□□□ 1.58
HMGA2-211ENST00000545998 PI4K2BQ8TCG2 481 aa24.93■■□□□ 1.58
HMGA2-211ENST00000545998 GGA3Q9NZ52 723 aa24.93■■□□□ 1.58
HMGA2-211ENST00000545998 STAP2Q9UGK3 403 aa24.93■■□□□ 1.58
HMGA2-211ENST00000545998 IGSF3O75054 1194 aa24.93■■□□□ 1.58
HMGA2-211ENST00000545998 ANGEL2Q5VTE6 544 aaKnown RBP24.93■■□□□ 1.58
HMGA2-211ENST00000545998 CNTROBQ8N137 903 aa24.93■■□□□ 1.58
HMGA2-211ENST00000545998 PAG1Q9NWQ8 432 aa24.93■■□□□ 1.58
HMGA2-211ENST00000545998 DAGLAQ9Y4D2 1042 aa24.93■■□□□ 1.58
HMGA2-211ENST00000545998 PITPNM2Q9BZ72 1349 aa24.92■■□□□ 1.58
HMGA2-211ENST00000545998 GOLIM4O00461 696 aa24.92■■□□□ 1.58
HMGA2-211ENST00000545998 TTF1Q15361 905 aaPredicted RBP24.92■■□□□ 1.58
HMGA2-211ENST00000545998 APOBEC3HQ6NTF7 200 aaKnown RBP24.92■■□□□ 1.58
HMGA2-211ENST00000545998 EDC3Q96F86 508 aaKnown RBP24.92■■□□□ 1.58
HMGA2-211ENST00000545998 FAM163AQ96GL9 167 aaPredicted RBP24.92■■□□□ 1.58
HMGA2-211ENST00000545998 GAKO14976 1311 aa24.91■■□□□ 1.58
HMGA2-211ENST00000545998 ERC2O15083 957 aa24.91■■□□□ 1.58
HMGA2-211ENST00000545998 PDE1AP54750 535 aa24.91■■□□□ 1.58
HMGA2-211ENST00000545998 SLF2Q8IX21 1173 aa24.91■■□□□ 1.58
HMGA2-211ENST00000545998 DCPSQ96C86 337 aaKnown RBP24.91■■□□□ 1.58
HMGA2-211ENST00000545998 GLRX3O76003 335 aaKnown RBP24.9■■□□□ 1.58
HMGA2-211ENST00000545998 ITGBL1O95965 494 aaPredicted RBP24.9■■□□□ 1.58
HMGA2-211ENST00000545998 CENPQQ7L2Z9 268 aaPredicted RBP24.9■■□□□ 1.58
HMGA2-211ENST00000545998 MROH7-TTC4A0A0A0MT08 1334 aa24.9■■□□□ 1.58
HMGA2-211ENST00000545998 MYO1BO43795 1136 aa24.89■■□□□ 1.58
HMGA2-211ENST00000545998 IDH1O75874 414 aaKnown RBP24.89■■□□□ 1.58
HMGA2-211ENST00000545998 GSTO1P78417 241 aa24.89■■□□□ 1.58
HMGA2-211ENST00000545998 TDRD3Q9H7E2 651 aaKnown RBP24.89■■□□□ 1.58
HMGA2-211ENST00000545998 MYH7P12883 1935 aa24.89■■□□□ 1.57
HMGA2-211ENST00000545998 SPDYE2Q495Y8 402 aa24.88■■□□□ 1.57
HMGA2-211ENST00000545998 PLEKHM2Q8IWE5 1019 aa24.88■■□□□ 1.57
HMGA2-211ENST00000545998 CCDC136Q96JN2 1154 aa24.88■■□□□ 1.57
HMGA2-211ENST00000545998 GLIS2Q9BZE0 524 aaPredicted RBP24.88■■□□□ 1.57
HMGA2-211ENST00000545998 CLRN2A0PK11 232 aa24.88■■□□□ 1.57
HMGA2-211ENST00000545998 C1QTNF8P60827 252 aa24.88■■□□□ 1.57
HMGA2-211ENST00000545998 MAP3K12Q12852 859 aa24.88■■□□□ 1.57
HMGA2-211ENST00000545998 NAA16Q6N069 864 aaPredicted RBP24.88■■□□□ 1.57
HMGA2-211ENST00000545998 CDC37L1Q7L3B6 337 aa24.88■■□□□ 1.57
HMGA2-211ENST00000545998 KRT26Q7Z3Y9 468 aa24.88■■□□□ 1.57
HMGA2-211ENST00000545998 ZNF70Q9UC06 446 aaPredicted RBP24.88■■□□□ 1.57
HMGA2-211ENST00000545998 LDHCP07864 332 aa24.87■■□□□ 1.57
HMGA2-211ENST00000545998 PDE4AP27815 886 aa24.87■■□□□ 1.57
HMGA2-211ENST00000545998 USP48Q86UV5 1035 aa24.87■■□□□ 1.57
HMGA2-211ENST00000545998 PASKQ96RG2 1323 aa24.86■■□□□ 1.57
HMGA2-211ENST00000545998 APOBEC3FQ8IUX4 373 aaKnown RBP24.86■■□□□ 1.57
HMGA2-211ENST00000545998 SULF1Q8IWU6 871 aa24.86■■□□□ 1.57
HMGA2-211ENST00000545998 OSBPL3Q9H4L5 887 aa24.86■■□□□ 1.57
HMGA2-211ENST00000545998 SCAF8Q9UPN6 1271 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms