RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 CDHR2Q9BYE9 1310 aa9.82□□□□□ -0.84
SNHG1-223ENST00000545440 ZNF541Q9H0D2 1346 aa9.82□□□□□ -0.84
SNHG1-223ENST00000545440 CEP350Q5VT06 3117 aa9.82□□□□□ -0.84
SNHG1-223ENST00000545440 IQCA1LA6NCM1 817 aa9.82□□□□□ -0.84
SNHG1-223ENST00000545440 POTECB2RU33 542 aa9.82□□□□□ -0.84
SNHG1-223ENST00000545440 FZD9O00144 591 aa9.82□□□□□ -0.84
SNHG1-223ENST00000545440 IRS4O14654 1257 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-223ENST00000545440 PCCAP05165 728 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-223ENST00000545440 SCUBE3Q8IX30 993 aa9.82□□□□□ -0.84
SNHG1-223ENST00000545440 SP8Q8IXZ3 490 aa9.82□□□□□ -0.84
SNHG1-223ENST00000545440 JDP2Q8WYK2 163 aa9.82□□□□□ -0.84
SNHG1-223ENST00000545440 RTFDC1Q9BY42 306 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-223ENST00000545440 VPS33BQ9H267 617 aa9.82□□□□□ -0.84
SNHG1-223ENST00000545440 CWC25Q9NXE8 425 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-223ENST00000545440 MAP3K2Q9Y2U5 619 aa9.82□□□□□ -0.84
SNHG1-223ENST00000545440 POLR2AP24928 1970 aaKnown RBP9.81□□□□□ -0.84
SNHG1-223ENST00000545440 PI4KAP2A4QPH2 592 aa9.81□□□□□ -0.84
SNHG1-223ENST00000545440 TRAK2O60296 914 aa9.81□□□□□ -0.84
SNHG1-223ENST00000545440 DDNO94850 711 aaPredicted RBP9.81□□□□□ -0.84
SNHG1-223ENST00000545440 NEXNQ0ZGT2 675 aa9.81□□□□□ -0.84
SNHG1-223ENST00000545440 DESI1Q6ICB0 168 aa9.81□□□□□ -0.84
SNHG1-223ENST00000545440 SLC51AQ86UW1 340 aa9.81□□□□□ -0.84
SNHG1-223ENST00000545440 GPC2Q8N158 579 aa9.81□□□□□ -0.84
SNHG1-223ENST00000545440 PI4KAP1Q8N8J0 262 aa9.81□□□□□ -0.84
SNHG1-223ENST00000545440 SUPT20HQ8NEM7 779 aa9.81□□□□□ -0.84
SNHG1-223ENST00000545440 TCERG1O14776 1098 aaKnown RBP9.8□□□□□ -0.84
SNHG1-223ENST00000545440 PPIP5K2O43314 1243 aa9.8□□□□□ -0.84
SNHG1-223ENST00000545440 VAMP4O75379 141 aa9.8□□□□□ -0.84
SNHG1-223ENST00000545440 PTPN5P54829 565 aa9.8□□□□□ -0.84
SNHG1-223ENST00000545440 CTDSPL2Q05D32 466 aa9.8□□□□□ -0.84
SNHG1-223ENST00000545440 EXOSC9Q06265 439 aaKnown RBP9.8□□□□□ -0.84
SNHG1-223ENST00000545440 DPP8Q6V1X1 898 aaPredicted RBP9.8□□□□□ -0.84
SNHG1-223ENST00000545440 NIM1KQ8IY84 436 aa9.8□□□□□ -0.84
SNHG1-223ENST00000545440 LARGE2Q8N3Y3 721 aa9.8□□□□□ -0.84
SNHG1-223ENST00000545440 SYMPKQ92797 1274 aaKnown RBP9.8□□□□□ -0.84
SNHG1-223ENST00000545440 ZNF428Q96B54 188 aa9.8□□□□□ -0.84
SNHG1-223ENST00000545440 RTL9Q8NET4 1388 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 NEURL1BA8MQ27 555 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 CFAP99D6REC4 459 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 CCER2I3L3R5 266 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 PDE8AO60658 829 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 IGKV5-2P06315 115 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 ABL2P42684 1182 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 EIF6P56537 245 aaKnown RBP9.79□□□□□ -0.84
SNHG1-223ENST00000545440 FKBP5Q13451 457 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-223ENST00000545440 CCDC152Q4G0S7 254 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 BLOC1S3Q6QNY0 202 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 G2E3Q7L622 706 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 MPNDQ8N594 471 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 MTMR14Q8NCE2 650 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 CELF1Q92879 486 aaKnown RBP9.79□□□□□ -0.84
SNHG1-223ENST00000545440 COG6Q9Y2V7 657 aa9.79□□□□□ -0.84
SNHG1-223ENST00000545440 MYH13Q9UKX3 1938 aa9.78□□□□□ -0.84
SNHG1-223ENST00000545440 ECM29Q5VYK3 1845 aa9.78□□□□□ -0.84
SNHG1-223ENST00000545440 COPS2P61201 443 aa9.78□□□□□ -0.84
SNHG1-223ENST00000545440 KIAA2012Q0VF49 1180 aa9.78□□□□□ -0.84
SNHG1-223ENST00000545440 AOC3Q16853 763 aa9.78□□□□□ -0.84
SNHG1-223ENST00000545440 BRICD5Q6PL45 260 aa9.78□□□□□ -0.84
SNHG1-223ENST00000545440 DNAAF4Q8WXU2 420 aa9.78□□□□□ -0.84
SNHG1-223ENST00000545440 TAF1DQ9H5J8 278 aaPredicted RBP9.78□□□□□ -0.84
SNHG1-223ENST00000545440 GDPD2Q9HCC8 539 aa9.78□□□□□ -0.84
SNHG1-223ENST00000545440 HACL1Q9UJ83 578 aa9.78□□□□□ -0.84
SNHG1-223ENST00000545440 ARAP2Q8WZ64 1704 aa9.78□□□□□ -0.84
SNHG1-223ENST00000545440 EPHX2P34913 555 aa9.77□□□□□ -0.85
SNHG1-223ENST00000545440 CTSWP56202 376 aa9.77□□□□□ -0.85
SNHG1-223ENST00000545440 RPS8P62241 208 aaKnown RBP9.77□□□□□ -0.85
SNHG1-223ENST00000545440 CWF19L2Q2TBE0 894 aaKnown RBP9.77□□□□□ -0.85
SNHG1-223ENST00000545440 LDHDQ86WU2 507 aa9.77□□□□□ -0.85
SNHG1-223ENST00000545440 LINS1Q8NG48 757 aa9.77□□□□□ -0.85
SNHG1-223ENST00000545440 SPSB2Q99619 263 aa9.77□□□□□ -0.85
SNHG1-223ENST00000545440 PCDH10Q9P2E7 1040 aa9.77□□□□□ -0.85
SNHG1-223ENST00000545440 ZNRF3Q9ULT6 936 aa9.77□□□□□ -0.85
SNHG1-223ENST00000545440 E9PSI1 815 aa9.76□□□□□ -0.85
SNHG1-223ENST00000545440 LMOD1P29536 600 aaPredicted RBP9.76□□□□□ -0.85
SNHG1-223ENST00000545440 GCKRQ14397 625 aa9.76□□□□□ -0.85
SNHG1-223ENST00000545440 WASHC4Q2M389 1173 aa9.76□□□□□ -0.85
SNHG1-223ENST00000545440 UBE3BQ7Z3V4 1068 aa9.76□□□□□ -0.85
SNHG1-223ENST00000545440 PNMA8AQ86V59 439 aaPredicted RBP9.76□□□□□ -0.85
SNHG1-223ENST00000545440 CDC5LQ99459 802 aaKnown RBP9.76□□□□□ -0.85
SNHG1-223ENST00000545440 PLA2G12BQ9BX93 195 aa9.76□□□□□ -0.85
SNHG1-223ENST00000545440 PODXL2Q9NZ53 605 aa9.76□□□□□ -0.85
SNHG1-223ENST00000545440 THSD7BQ9C0I4 1608 aa9.75□□□□□ -0.85
SNHG1-223ENST00000545440 ZNF609O15014 1411 aa9.75□□□□□ -0.85
SNHG1-223ENST00000545440 H7C1W4 665 aa9.75□□□□□ -0.85
SNHG1-223ENST00000545440 SCNN1DP51172 638 aa9.75□□□□□ -0.85
SNHG1-223ENST00000545440 GPSM2P81274 684 aa9.75□□□□□ -0.85
SNHG1-223ENST00000545440 RNF19BQ6ZMZ0 732 aa9.75□□□□□ -0.85
SNHG1-223ENST00000545440 ANKRD18AQ8IVF6 992 aa9.75□□□□□ -0.85
SNHG1-223ENST00000545440 JARID2Q92833 1246 aaPredicted RBP9.75□□□□□ -0.85
SNHG1-223ENST00000545440 POM121Q96HA1 1249 aa9.75□□□□□ -0.85
SNHG1-223ENST00000545440 SEC31BQ9NQW1 1179 aa9.75□□□□□ -0.85
SNHG1-223ENST00000545440 NSFL1CQ9UNZ2 370 aaKnown RBP9.75□□□□□ -0.85
SNHG1-223ENST00000545440 GJA3Q9Y6H8 435 aa9.75□□□□□ -0.85
SNHG1-223ENST00000545440 JUNDP17535 347 aa9.74□□□□□ -0.85
SNHG1-223ENST00000545440 CASP7P55210 303 aa9.74□□□□□ -0.85
SNHG1-223ENST00000545440 EAPPQ56P03 285 aaPredicted RBP9.74□□□□□ -0.85
SNHG1-223ENST00000545440 LYPD8Q6UX82 237 aa9.74□□□□□ -0.85
SNHG1-223ENST00000545440 DNAJC5GQ8N7S2 189 aa9.74□□□□□ -0.85
SNHG1-223ENST00000545440 TTLL11Q8NHH1 800 aa9.74□□□□□ -0.85
SNHG1-223ENST00000545440 TBC1D16Q8TBP0 767 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms