RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 USP44Q9H0E7 712 aa15.57■□□□□ 0.08
ACTN1-206ENST00000544964 R3HDMLQ9H3Y0 253 aa15.57■□□□□ 0.08
ACTN1-206ENST00000544964 CENPFP49454 3210 aa15.57■□□□□ 0.08
ACTN1-206ENST00000544964 SREBF2Q12772 1141 aa15.56■□□□□ 0.08
ACTN1-206ENST00000544964 SPDYE2Q495Y8 402 aa15.56■□□□□ 0.08
ACTN1-206ENST00000544964 LRRC24Q50LG9 513 aa15.56■□□□□ 0.08
ACTN1-206ENST00000544964 NBPF12Q5TAG4 269 aaPredicted RBP15.56■□□□□ 0.08
ACTN1-206ENST00000544964 VEZTQ9HBM0 779 aa15.56■□□□□ 0.08
ACTN1-206ENST00000544964 COG6Q9Y2V7 657 aa15.56■□□□□ 0.08
ACTN1-206ENST00000544964 MROH5Q6ZUA9 1318 aa15.56■□□□□ 0.08
ACTN1-206ENST00000544964 GPR25O00155 361 aa15.55■□□□□ 0.08
ACTN1-206ENST00000544964 MYO1BO43795 1136 aa15.55■□□□□ 0.08
ACTN1-206ENST00000544964 CENPBP07199 599 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-206ENST00000544964 HIBADHP31937 336 aaKnown RBP15.55■□□□□ 0.08
ACTN1-206ENST00000544964 SOX10P56693 466 aa15.55■□□□□ 0.08
ACTN1-206ENST00000544964 PDE3AQ14432 1141 aa15.55■□□□□ 0.08
ACTN1-206ENST00000544964 GRIK5Q16478 980 aa15.55■□□□□ 0.08
ACTN1-206ENST00000544964 CDAN1Q8IWY9 1227 aa15.55■□□□□ 0.08
ACTN1-206ENST00000544964 WNK4Q96J92 1243 aa15.55■□□□□ 0.08
ACTN1-206ENST00000544964 MEIS3Q99687 375 aa15.55■□□□□ 0.08
ACTN1-206ENST00000544964 SERPINA10Q9UK55 444 aa15.55■□□□□ 0.08
ACTN1-206ENST00000544964 BRCA2P51587 3418 aa15.54■□□□□ 0.08
ACTN1-206ENST00000544964 RASA3Q14644 834 aa15.54■□□□□ 0.08
ACTN1-206ENST00000544964 KLHDC4Q8TBB5 520 aa15.54■□□□□ 0.08
ACTN1-206ENST00000544964 ZNF70Q9UC06 446 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-206ENST00000544964 TTF2Q9UNY4 1162 aaKnown RBP15.54■□□□□ 0.08
ACTN1-206ENST00000544964 HPS5Q9UPZ3 1129 aa15.54■□□□□ 0.08
ACTN1-206ENST00000544964 IGF2BP3O00425 579 aaKnown RBP eCLIP15.53■□□□□ 0.08
ACTN1-206ENST00000544964 PPP1R12BO60237 982 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-206ENST00000544964 UBTFL1P0CB47 393 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-206ENST00000544964 ZBTB48P10074 688 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-206ENST00000544964 GJA5P36382 358 aa15.53■□□□□ 0.08
ACTN1-206ENST00000544964 RBM5P52756 815 aaKnown RBP eCLIP15.53■□□□□ 0.08
ACTN1-206ENST00000544964 MVPQ14764 893 aaKnown RBP15.53■□□□□ 0.08
ACTN1-206ENST00000544964 FBXO33Q7Z6M2 555 aa15.53■□□□□ 0.08
ACTN1-206ENST00000544964 TEPSINQ96N21 525 aa15.53■□□□□ 0.08
ACTN1-206ENST00000544964 MANSC4A6NHS7 340 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-206ENST00000544964 USP2O75604 605 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-206ENST00000544964 CRKP46108 304 aa15.52■□□□□ 0.08
ACTN1-206ENST00000544964 SUPT20HL1Q3ZLR7 823 aa15.52■□□□□ 0.08
ACTN1-206ENST00000544964 METTL24Q5JXM2 366 aa15.52■□□□□ 0.08
ACTN1-206ENST00000544964 TDRD3Q9H7E2 651 aaKnown RBP15.52■□□□□ 0.08
ACTN1-206ENST00000544964 IQSEC3Q9UPP2 1182 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-206ENST00000544964 MKI67P46013 3256 aaKnown RBP15.52■□□□□ 0.07
ACTN1-206ENST00000544964 UNCXA6NJT0 531 aa15.51■□□□□ 0.07
ACTN1-206ENST00000544964 ZBTB7BO15156 539 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-206ENST00000544964 PDE8BO95263 885 aa15.51■□□□□ 0.07
ACTN1-206ENST00000544964 GNAI3P08754 354 aa15.51■□□□□ 0.07
ACTN1-206ENST00000544964 FGFR2P21802 821 aa15.51■□□□□ 0.07
ACTN1-206ENST00000544964 RFX5P48382 616 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-206ENST00000544964 TNFAIP1Q13829 316 aa15.51■□□□□ 0.07
ACTN1-206ENST00000544964 PKN2Q16513 984 aaKnown RBP15.51■□□□□ 0.07
ACTN1-206ENST00000544964 IFNL1Q8IU54 200 aa15.51■□□□□ 0.07
ACTN1-206ENST00000544964 SLC10A4Q96EP9 437 aa15.51■□□□□ 0.07
ACTN1-206ENST00000544964 LRRFIP2Q9Y608 721 aaKnown RBP15.51■□□□□ 0.07
ACTN1-206ENST00000544964 FKTNO75072 461 aa15.5■□□□□ 0.07
ACTN1-206ENST00000544964 IREB2P48200 963 aaKnown RBP15.5■□□□□ 0.07
ACTN1-206ENST00000544964 IRX6P78412 446 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-206ENST00000544964 TMEM39BQ9GZU3 492 aa15.5■□□□□ 0.07
ACTN1-206ENST00000544964 C1orf115Q9H7X2 142 aa15.5■□□□□ 0.07
ACTN1-206ENST00000544964 DDX19BQ9UMR2 479 aa15.5■□□□□ 0.07
ACTN1-206ENST00000544964 KIAA0100Q14667 2235 aaKnown RBP15.49■□□□□ 0.07
ACTN1-206ENST00000544964 ALDH1A1P00352 501 aa15.49■□□□□ 0.07
ACTN1-206ENST00000544964 BCAMP50895 628 aa15.49■□□□□ 0.07
ACTN1-206ENST00000544964 CHAF1AQ13111 956 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-206ENST00000544964 FBXO46Q6PJ61 603 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-206ENST00000544964 ANKRD13AQ8IZ07 590 aa15.49■□□□□ 0.07
ACTN1-206ENST00000544964 CRBNQ96SW2 442 aa15.49■□□□□ 0.07
ACTN1-206ENST00000544964 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-206ENST00000544964 RBBP6Q7Z6E9 1792 aaKnown RBP15.49■□□□□ 0.07
ACTN1-206ENST00000544964 TCP10L2B9ZVM9 353 aa15.48■□□□□ 0.07
ACTN1-206ENST00000544964 GNAI2P04899 355 aa15.48■□□□□ 0.07
ACTN1-206ENST00000544964 INHBEP58166 350 aa15.48■□□□□ 0.07
ACTN1-206ENST00000544964 HDLBPQ00341 1268 aaKnown RBP15.48■□□□□ 0.07
ACTN1-206ENST00000544964 PUM3Q15397 648 aaKnown RBP15.48■□□□□ 0.07
ACTN1-206ENST00000544964 CAVIN4Q5BKX8 364 aa15.48■□□□□ 0.07
ACTN1-206ENST00000544964 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-206ENST00000544964 VPS37DQ86XT2 251 aa15.48■□□□□ 0.07
ACTN1-206ENST00000544964 TBC1D22AQ8WUA7 517 aa15.48■□□□□ 0.07
ACTN1-206ENST00000544964 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
ACTN1-206ENST00000544964 PTPN18Q99952 460 aa15.48■□□□□ 0.07
ACTN1-206ENST00000544964 TESPA1A2RU30 521 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-206ENST00000544964 EYA2O00167 538 aa15.47■□□□□ 0.07
ACTN1-206ENST00000544964 SLC34A2O95436 690 aa15.47■□□□□ 0.07
ACTN1-206ENST00000544964 CACNB3P54284 484 aa15.47■□□□□ 0.07
ACTN1-206ENST00000544964 CRHR2Q13324 411 aa15.47■□□□□ 0.07
ACTN1-206ENST00000544964 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.47■□□□□ 0.07
ACTN1-206ENST00000544964 OPTNQ96CV9 577 aa15.47■□□□□ 0.07
ACTN1-206ENST00000544964 ELP3Q9H9T3 547 aa15.47■□□□□ 0.07
ACTN1-206ENST00000544964 RPAP1Q9BWH6 1393 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-206ENST00000544964 CAP1Q01518 475 aa15.46■□□□□ 0.07
ACTN1-206ENST00000544964 VGLL4Q14135 290 aa15.46■□□□□ 0.07
ACTN1-206ENST00000544964 ATG9AQ7Z3C6 839 aa15.46■□□□□ 0.07
ACTN1-206ENST00000544964 TEKT1Q969V4 418 aa15.46■□□□□ 0.07
ACTN1-206ENST00000544964 MS4A4AQ96JQ5 239 aa15.46■□□□□ 0.07
ACTN1-206ENST00000544964 ZDHHC15Q96MV8 337 aa15.46■□□□□ 0.07
ACTN1-206ENST00000544964 HDAC5Q9UQL6 1122 aa15.46■□□□□ 0.07
ACTN1-206ENST00000544964 ZSWIM8A7E2V4 1837 aa15.45■□□□□ 0.06
ACTN1-206ENST00000544964 IFIT1P09914 478 aaKnown RBP15.45■□□□□ 0.06
ACTN1-206ENST00000544964 APOBEC3HQ6NTF7 200 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms