RNA–Protein interactions for RNA: ENST00000544665.7

ITGAM-202, Transcript of integrin subunit alpha M, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITGAM, Length 4,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-202ENST00000544665 ALS2CR12Q96Q35 445 aa16.34■□□□□ 0.21
ITGAM-202ENST00000544665 NEFHP12036 1026 aa16.33■□□□□ 0.21
ITGAM-202ENST00000544665 SSR1P43307 286 aaKnown RBP16.33■□□□□ 0.21
ITGAM-202ENST00000544665 KARSQ15046 597 aaKnown RBP16.33■□□□□ 0.21
ITGAM-202ENST00000544665 PUM3Q15397 648 aaKnown RBP16.33■□□□□ 0.21
ITGAM-202ENST00000544665 TMEM87BQ96K49 555 aa16.33■□□□□ 0.21
ITGAM-202ENST00000544665 MTMR6Q9Y217 621 aa16.33■□□□□ 0.21
ITGAM-202ENST00000544665 E7EWF7 191 aa16.33■□□□□ 0.2
ITGAM-202ENST00000544665 TAF5LO75529 589 aa16.33■□□□□ 0.2
ITGAM-202ENST00000544665 TNIP1Q15025 636 aa16.33■□□□□ 0.2
ITGAM-202ENST00000544665 PHKBQ93100 1093 aa16.33■□□□□ 0.2
ITGAM-202ENST00000544665 ROBO2Q9HCK4 1378 aa16.33■□□□□ 0.2
ITGAM-202ENST00000544665 POTEB2H3BUK9 544 aa16.33■□□□□ 0.2
ITGAM-202ENST00000544665 CALML3P27482 149 aa16.33■□□□□ 0.2
ITGAM-202ENST00000544665 PRDM1O75626 825 aa16.33■□□□□ 0.2
ITGAM-202ENST00000544665 CCDC175P0C221 793 aa16.33■□□□□ 0.2
ITGAM-202ENST00000544665 SF3B2Q13435 895 aaKnown RBP16.33■□□□□ 0.2
ITGAM-202ENST00000544665 PICALMQ13492 652 aa16.33■□□□□ 0.2
ITGAM-202ENST00000544665 ZSWIM6Q9HCJ5 1215 aa16.33■□□□□ 0.2
ITGAM-202ENST00000544665 TPTE2Q6XPS3 522 aa16.32■□□□□ 0.2
ITGAM-202ENST00000544665 GTF3C6Q969F1 213 aa16.32■□□□□ 0.2
ITGAM-202ENST00000544665 NSFL1CQ9UNZ2 370 aaKnown RBP16.32■□□□□ 0.2
ITGAM-202ENST00000544665 PDE8AO60658 829 aa16.32■□□□□ 0.2
ITGAM-202ENST00000544665 PHKG2P15735 406 aa16.32■□□□□ 0.2
ITGAM-202ENST00000544665 ZNF75DP51815 510 aa16.32■□□□□ 0.2
ITGAM-202ENST00000544665 ADCK5Q3MIX3 580 aa16.32■□□□□ 0.2
ITGAM-202ENST00000544665 PLIN2Q99541 437 aa16.32■□□□□ 0.2
ITGAM-202ENST00000544665 LZTFL1Q9NQ48 299 aa16.32■□□□□ 0.2
ITGAM-202ENST00000544665 VWA3AA6NCI4 1184 aa16.32■□□□□ 0.2
ITGAM-202ENST00000544665 SPECC1Q5M775 1068 aa16.32■□□□□ 0.2
ITGAM-202ENST00000544665 DIS3L2Q8IYB7 885 aaKnown RBP16.32■□□□□ 0.2
ITGAM-202ENST00000544665 CDC42BPAQ5VT25 1732 aa16.32■□□□□ 0.2
ITGAM-202ENST00000544665 ZNF174Q15697 407 aa16.31■□□□□ 0.2
ITGAM-202ENST00000544665 KCNH3Q9ULD8 1083 aa16.31■□□□□ 0.2
ITGAM-202ENST00000544665 TRPM1Q7Z4N2 1603 aa16.31■□□□□ 0.2
ITGAM-202ENST00000544665 TMCO5BA8MYB1 307 aa16.31■□□□□ 0.2
ITGAM-202ENST00000544665 NOP2P46087 812 aaKnown RBP16.31■□□□□ 0.2
ITGAM-202ENST00000544665 RILPL1Q5EBL4 403 aa16.31■□□□□ 0.2
ITGAM-202ENST00000544665 TTLL7Q6ZT98 887 aa16.31■□□□□ 0.2
ITGAM-202ENST00000544665 LSG1Q9H089 658 aaKnown RBP16.31■□□□□ 0.2
ITGAM-202ENST00000544665 ARFGAP3Q9NP61 516 aa16.31■□□□□ 0.2
ITGAM-202ENST00000544665 DRC1Q96MC2 740 aa16.31■□□□□ 0.2
ITGAM-202ENST00000544665 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■■■■■ 96.1
ITGAM-202ENST00000544665 CYLC1P35663 651 aaPredicted RBP16.31■□□□□ 0.2
ITGAM-202ENST00000544665 HLTFQ14527 1009 aaKnown RBP eCLIP16.31■□□□□ 0.2
ITGAM-202ENST00000544665 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.3■□□□□ 0.2
ITGAM-202ENST00000544665 IQUBQ8NA54 791 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 DSCC1Q9BVC3 393 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 ZNF202O95125 648 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 ST5P78524 1137 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 ZNF622Q969S3 477 aaKnown RBP eCLIP16.3■□□□□ 0.2
ITGAM-202ENST00000544665 RGS12O14924 1447 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 CTAGE15A4D2H0 777 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 CTAGE8P0CG41 777 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 MCM6Q14566 821 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 CTAGE6Q86UF2 777 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 CTAGE4Q8IX94 777 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 EFCAB6Q5THR3 1501 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 USP6P35125 1406 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 CTDSPL2Q05D32 466 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 KRT40Q6A162 431 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 TLR7Q9NYK1 1049 aaKnown RBP16.3■□□□□ 0.2
ITGAM-202ENST00000544665 KIF1BO60333 1816 aa16.3■□□□□ 0.2
ITGAM-202ENST00000544665 ZNF532Q9HCE3 1301 aa16.29■□□□□ 0.2
ITGAM-202ENST00000544665 PRAMEF22A3QJZ6 481 aa16.29■□□□□ 0.2
ITGAM-202ENST00000544665 LMAN1P49257 510 aa16.29■□□□□ 0.2
ITGAM-202ENST00000544665 DEXIO95424 95 aa16.29■□□□□ 0.2
ITGAM-202ENST00000544665 EHBP1Q8NDI1 1231 aa16.29■□□□□ 0.2
ITGAM-202ENST00000544665 LRRC27Q9C0I9 530 aa16.29■□□□□ 0.2
ITGAM-202ENST00000544665 NYXQ9GZU5 481 aa16.29■□□□□ 0.2
ITGAM-202ENST00000544665 V9GY48 417 aaPredicted RBP16.29■□□□□ 0.2
ITGAM-202ENST00000544665 ZBTB9Q96C00 473 aa16.29■□□□□ 0.2
ITGAM-202ENST00000544665 C8orf37Q96NL8 207 aa16.29■□□□□ 0.2
ITGAM-202ENST00000544665 C6orf50Q9HD87 102 aa16.29■□□□□ 0.2
ITGAM-202ENST00000544665 USP8P40818 1118 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 MMRN2Q9H8L6 949 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 ZCCHC11Q5TAX3 1644 aaKnown RBP16.28■□□□□ 0.2
ITGAM-202ENST00000544665 IQGAP3Q86VI3 1631 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 LDHBP07195 334 aaKnown RBP16.28■□□□□ 0.2
ITGAM-202ENST00000544665 TCIRG1Q13488 830 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 DTHD1Q6ZMT9 781 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 ZNF804AQ7Z570 1209 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 LPIN2Q92539 896 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 FSD2A1L4K1 749 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 POLR2DO15514 142 aaKnown RBP16.28■□□□□ 0.2
ITGAM-202ENST00000544665 SPAG5Q96R06 1193 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 PPP1R9BQ96SB3 815 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 FEZ1Q99689 392 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 SRRTQ9BXP5 876 aaKnown RBP16.28■□□□□ 0.2
ITGAM-202ENST00000544665 ZMYND15Q9H091 742 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 RIOK3O14730 519 aaKnown RBP16.28■□□□□ 0.2
ITGAM-202ENST00000544665 NR1I2O75469 434 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 TUBB4AP04350 444 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 HMGB2P26583 209 aaKnown RBP16.28■□□□□ 0.2
ITGAM-202ENST00000544665 UBXN1Q04323 297 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 LRRC24Q50LG9 513 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 ERCC6L2Q5T890 1561 aa16.28■□□□□ 0.2
ITGAM-202ENST00000544665 SHTN1A0MZ66 631 aa16.27■□□□□ 0.2
ITGAM-202ENST00000544665 TNNI2P48788 182 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms