RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 FAN1Q9Y2M0 1017 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 CALML3P27482 149 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 FNBP1Q96RU3 617 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 PLEKHH2Q8IVE3 1493 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 RRP36Q96EU6 259 aaKnown RBP17.19■□□□□ 0.34
HMGA2-210ENST00000541363 KLF18A0A0U1RQI7 1052 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 OPHN1O60890 802 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 PPP2R5DQ14738 602 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 PTPRCP08575 1304 aa17.18■□□□□ 0.34
HMGA2-210ENST00000541363 PPFIA1Q13136 1202 aa17.18■□□□□ 0.34
HMGA2-210ENST00000541363 TRIM6Q9C030 488 aaPredicted RBP17.18■□□□□ 0.34
HMGA2-210ENST00000541363 CNGA4Q8IV77 575 aa17.18■□□□□ 0.34
HMGA2-210ENST00000541363 GOLGA6CA6NDK9 693 aa17.18■□□□□ 0.34
HMGA2-210ENST00000541363 GOLGA6DP0CG33 693 aa17.18■□□□□ 0.34
HMGA2-210ENST00000541363 PPP2R3AQ06190 1150 aa17.18■□□□□ 0.34
HMGA2-210ENST00000541363 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
HMGA2-210ENST00000541363 GOLGA6AQ9NYA3 693 aa17.18■□□□□ 0.34
HMGA2-210ENST00000541363 CFAP70Q5T0N1 1121 aa17.18■□□□□ 0.34
HMGA2-210ENST00000541363 EIF2AQ9BY44 585 aaKnown RBP17.18■□□□□ 0.34
HMGA2-210ENST00000541363 UQCRFS1P1P0C7P4 283 aa17.18■□□□□ 0.34
HMGA2-210ENST00000541363 PPP4R1Q8TF05 950 aa17.18■□□□□ 0.34
HMGA2-210ENST00000541363 ZKSCAN3Q9BRR0 538 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 NKTRP30414 1462 aaKnown RBP17.17■□□□□ 0.34
HMGA2-210ENST00000541363 ERBINQ96RT1 1412 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 SLC12A2P55011 1212 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 PLCB4Q15147 1175 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 RUFY4Q6ZNE9 571 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 SLC12A5Q9H2X9 1139 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 SDCCAG3Q96C92 435 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 TBC1D2Q9BYX2 928 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 CASC4Q6P4E1 433 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 ZBTB9Q96C00 473 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 TUBB2AQ13885 445 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 TUBB2BQ9BVA1 445 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 ECHDC1Q9NTX5 307 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 RTL9Q8NET4 1388 aa17.17■□□□□ 0.34
HMGA2-210ENST00000541363 MARCKSP29966 332 aaPredicted RBP17.16■□□□□ 0.34
HMGA2-210ENST00000541363 NACA2Q9H009 215 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 DDX21Q9NR30 783 aaKnown RBP eCLIP17.16■□□□□ 0.34
HMGA2-210ENST00000541363 RBBP5Q15291 538 aaKnown RBP17.16■□□□□ 0.34
HMGA2-210ENST00000541363 C8orf74Q6P047 294 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 MPRIPQ6WCQ1 1025 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 ZNF622Q969S3 477 aaKnown RBP eCLIP17.16■□□□□ 0.34
HMGA2-210ENST00000541363 ANKRD50Q9ULJ7 1429 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 GOLGA6BA6NDN3 693 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 CLSTN2Q9H4D0 955 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 PDZD8Q8NEN9 1154 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 LDHAL6AQ6ZMR3 332 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 BAG5Q9UL15 447 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 ZBTB21Q9ULJ3 1066 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 TNFAIP3P21580 790 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 PHEXP78562 749 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 DBN1Q16643 649 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 CNPY2Q9Y2B0 182 aa17.16■□□□□ 0.34
HMGA2-210ENST00000541363 MRPL46Q9H2W6 279 aaKnown RBP17.15■□□□□ 0.34
HMGA2-210ENST00000541363 ZBTB24O43167 697 aaPredicted RBP17.15■□□□□ 0.34
HMGA2-210ENST00000541363 SYT10Q6XYQ8 523 aa17.15■□□□□ 0.34
HMGA2-210ENST00000541363 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
HMGA2-210ENST00000541363 DNAJC25Q9H1X3 360 aa17.15■□□□□ 0.34
HMGA2-210ENST00000541363 ZC4H2Q9NQZ6 224 aa17.15■□□□□ 0.34
HMGA2-210ENST00000541363 LMOD1P29536 600 aaPredicted RBP17.15■□□□□ 0.34
HMGA2-210ENST00000541363 DTHD1Q6ZMT9 781 aa17.15■□□□□ 0.34
HMGA2-210ENST00000541363 GTF3C6Q969F1 213 aa17.15■□□□□ 0.34
HMGA2-210ENST00000541363 RBSNQ9H1K0 784 aa17.15■□□□□ 0.34
HMGA2-210ENST00000541363 AKR1B15C9JRZ8 316 aaPredicted RBP17.15■□□□□ 0.34
HMGA2-210ENST00000541363 TRIM75PA6NK02 468 aa17.14■□□□□ 0.34
HMGA2-210ENST00000541363 MORC4Q8TE76 937 aa17.14■□□□□ 0.34
HMGA2-210ENST00000541363 PALM3A6NDB9 673 aaPredicted RBP17.14■□□□□ 0.33
HMGA2-210ENST00000541363 UTP14CQ5TAP6 766 aaKnown RBP17.14■□□□□ 0.33
HMGA2-210ENST00000541363 ANKRD20A3Q5VUR7 823 aa17.14■□□□□ 0.33
HMGA2-210ENST00000541363 BANK1Q8NDB2 785 aa17.14■□□□□ 0.33
HMGA2-210ENST00000541363 FAF1Q9UNN5 650 aaPredicted RBP17.14■□□□□ 0.33
HMGA2-210ENST00000541363 KIF21BO75037 1637 aa17.14■□□□□ 0.33
HMGA2-210ENST00000541363 BIRC3Q13489 604 aa17.14■□□□□ 0.33
HMGA2-210ENST00000541363 USP48Q86UV5 1035 aa17.14■□□□□ 0.33
HMGA2-210ENST00000541363 MX2P20592 715 aa17.14■□□□□ 0.33
HMGA2-210ENST00000541363 MAN1A1P33908 653 aa17.14■□□□□ 0.33
HMGA2-210ENST00000541363 C16orf71Q8IYS4 520 aaPredicted RBP17.14■□□□□ 0.33
HMGA2-210ENST00000541363 MAP3K7CLP57077 242 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 OGFOD1Q8N543 542 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 THEGQ9P2T0 379 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 GRM1Q13255 1194 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 CCDC152Q4G0S7 254 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 TBC1D9Q6ZT07 1266 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 NOX5Q96PH1 765 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 PPP1R2P41236 205 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 SMTNP53814 917 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 TRIM14Q14142 442 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 PHLDB3Q6NSJ2 640 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 CALUO43852 315 aaPredicted RBP17.13■□□□□ 0.33
HMGA2-210ENST00000541363 GPTP24298 496 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 CDAN1Q8IWY9 1227 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 NAPGQ99747 312 aaPredicted RBP17.13■□□□□ 0.33
HMGA2-210ENST00000541363 MAP3K2Q9Y2U5 619 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 HGSO14964 777 aaPredicted RBP17.13■□□□□ 0.33
HMGA2-210ENST00000541363 RNF8O76064 485 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 ASIC2Q16515 512 aa17.13■□□□□ 0.33
HMGA2-210ENST00000541363 PNMA8AQ86V59 439 aaPredicted RBP17.13■□□□□ 0.33
HMGA2-210ENST00000541363 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms