RNA–Protein interactions for RNA: ENST00000541132.1

RAD9A-206, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 3

Gene RAD9A, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-206ENST00000541132 C9orf78Q9NZ63 289 aaPredicted RBP22.79■■□□□ 1.24
RAD9A-206ENST00000541132 SALL2Q9Y467 1007 aaPredicted RBP22.79■■□□□ 1.24
RAD9A-206ENST00000541132 KIAA0100Q14667 2235 aaKnown RBP22.78■■□□□ 1.24
RAD9A-206ENST00000541132 TNNI2P48788 182 aa22.78■■□□□ 1.24
RAD9A-206ENST00000541132 MAP3K9P80192 1104 aa22.78■■□□□ 1.24
RAD9A-206ENST00000541132 TAF1CQ15572 869 aaPredicted RBP22.78■■□□□ 1.24
RAD9A-206ENST00000541132 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.78■■□□□ 1.24
RAD9A-206ENST00000541132 CDAN1Q8IWY9 1227 aa22.78■■□□□ 1.24
RAD9A-206ENST00000541132 CNKSR2Q8WXI2 1034 aa22.78■■□□□ 1.24
RAD9A-206ENST00000541132 BRI3BPQ8WY22 251 aa22.78■■□□□ 1.24
RAD9A-206ENST00000541132 TEPSINQ96N21 525 aa22.78■■□□□ 1.24
RAD9A-206ENST00000541132 MKI67P46013 3256 aaKnown RBP22.78■■□□□ 1.24
RAD9A-206ENST00000541132 CCL15-CCL14A0A0B4J2E2 113 aa22.77■■□□□ 1.24
RAD9A-206ENST00000541132 CRKP46108 304 aa22.77■■□□□ 1.24
RAD9A-206ENST00000541132 GTF2A2P52657 109 aa22.77■■□□□ 1.24
RAD9A-206ENST00000541132 CCL15Q16663 113 aa22.77■■□□□ 1.24
RAD9A-206ENST00000541132 FAM84BQ96KN1 310 aaPredicted RBP22.77■■□□□ 1.24
RAD9A-206ENST00000541132 TMEM39BQ9GZU3 492 aa22.77■■□□□ 1.24
RAD9A-206ENST00000541132 CSADQ9Y600 493 aa22.77■■□□□ 1.24
RAD9A-206ENST00000541132 VGLL4Q14135 290 aa22.76■■□□□ 1.23
RAD9A-206ENST00000541132 NBPF11Q86T75 865 aa22.76■■□□□ 1.23
RAD9A-206ENST00000541132 SLC9C1Q4G0N8 1177 aa22.75■■□□□ 1.23
RAD9A-206ENST00000541132 WDR63Q8IWG1 891 aa22.75■■□□□ 1.23
RAD9A-206ENST00000541132 OTUD5Q96G74 571 aa22.75■■□□□ 1.23
RAD9A-206ENST00000541132 ZNF333Q96JL9 665 aa22.75■■□□□ 1.23
RAD9A-206ENST00000541132 PTCH2Q9Y6C5 1203 aa22.75■■□□□ 1.23
RAD9A-206ENST00000541132 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.74■■□□□ 1.23
RAD9A-206ENST00000541132 PUS3Q9BZE2 481 aaKnown RBP22.74■■□□□ 1.23
RAD9A-206ENST00000541132 WDHD1O75717 1129 aaPredicted RBP22.73■■□□□ 1.23
RAD9A-206ENST00000541132 SLC4A8Q2Y0W8 1093 aa22.73■■□□□ 1.23
RAD9A-206ENST00000541132 SLC4A10Q6U841 1118 aa22.73■■□□□ 1.23
RAD9A-206ENST00000541132 VPS37DQ86XT2 251 aa22.73■■□□□ 1.23
RAD9A-206ENST00000541132 FAM43AQ8N2R8 423 aa22.73■■□□□ 1.23
RAD9A-206ENST00000541132 ALDH1L1O75891 902 aa22.72■■□□□ 1.23
RAD9A-206ENST00000541132 CHAF1AQ13111 956 aaPredicted RBP22.72■■□□□ 1.23
RAD9A-206ENST00000541132 SRCIN1Q9C0H9 1055 aa22.72■■□□□ 1.23
RAD9A-206ENST00000541132 IQSEC3Q9UPP2 1182 aaPredicted RBP22.72■■□□□ 1.23
RAD9A-206ENST00000541132 BRCA2P51587 3418 aa22.72■■□□□ 1.23
RAD9A-206ENST00000541132 FRAT2O75474 233 aaPredicted RBP22.71■■□□□ 1.23
RAD9A-206ENST00000541132 GRIK5Q16478 980 aa22.71■■□□□ 1.23
RAD9A-206ENST00000541132 SUCLG2Q96I99 432 aa22.71■■□□□ 1.23
RAD9A-206ENST00000541132 MROH5Q6ZUA9 1318 aa22.71■■□□□ 1.23
RAD9A-206ENST00000541132 SPDYE5A6NIY4 337 aa22.7■■□□□ 1.22
RAD9A-206ENST00000541132 MYCP01106 439 aaPredicted RBP22.7■■□□□ 1.22
RAD9A-206ENST00000541132 CACNB3P54284 484 aa22.7■■□□□ 1.22
RAD9A-206ENST00000541132 HDLBPQ00341 1268 aaKnown RBP22.7■■□□□ 1.22
RAD9A-206ENST00000541132 RIPOR2Q9Y4F9 1068 aa22.7■■□□□ 1.22
RAD9A-206ENST00000541132 ZSWIM8A7E2V4 1837 aa22.69■■□□□ 1.22
RAD9A-206ENST00000541132 CETPP11597 493 aa22.69■■□□□ 1.22
RAD9A-206ENST00000541132 KIF22Q14807 665 aa22.69■■□□□ 1.22
RAD9A-206ENST00000541132 FBXO33Q7Z6M2 555 aa22.69■■□□□ 1.22
RAD9A-206ENST00000541132 TBC1D22AQ8WUA7 517 aa22.69■■□□□ 1.22
RAD9A-206ENST00000541132 TEKT1Q969V4 418 aa22.69■■□□□ 1.22
RAD9A-206ENST00000541132 TLR2O60603 784 aa22.68■■□□□ 1.22
RAD9A-206ENST00000541132 CAVIN4Q5BKX8 364 aa22.68■■□□□ 1.22
RAD9A-206ENST00000541132 ERO1BQ86YB8 467 aa22.68■■□□□ 1.22
RAD9A-206ENST00000541132 KAZALD1Q96I82 304 aa22.68■■□□□ 1.22
RAD9A-206ENST00000541132 WRNIP1Q96S55 665 aa22.68■■□□□ 1.22
RAD9A-206ENST00000541132 MRS2Q9HD23 443 aa22.68■■□□□ 1.22
RAD9A-206ENST00000541132 TMOD2Q9NZR1 351 aa22.68■■□□□ 1.22
RAD9A-206ENST00000541132 SNCAIPQ9Y6H5 919 aa22.68■■□□□ 1.22
RAD9A-206ENST00000541132 FXR1P51114 621 aaKnown RBP eCLIP22.67■■□□□ 1.22
RAD9A-206ENST00000541132 METTL24Q5JXM2 366 aa22.67■■□□□ 1.22
RAD9A-206ENST00000541132 SH3TC2Q8TF17 1288 aa22.67■■□□□ 1.22
RAD9A-206ENST00000541132 ZKSCAN4Q969J2 545 aaPredicted RBP22.67■■□□□ 1.22
RAD9A-206ENST00000541132 ARHGAP39Q9C0H5 1083 aa22.67■■□□□ 1.22
RAD9A-206ENST00000541132 SPINK5Q9NQ38 1064 aaPredicted RBP22.67■■□□□ 1.22
RAD9A-206ENST00000541132 BTBD19C9JJ37 291 aa22.66■■□□□ 1.22
RAD9A-206ENST00000541132 NBPF7P0C2Y1 421 aaPredicted RBP22.66■■□□□ 1.22
RAD9A-206ENST00000541132 LACTBP83111 547 aaPredicted RBP22.66■■□□□ 1.22
RAD9A-206ENST00000541132 SNAPC2Q13487 334 aa22.66■■□□□ 1.22
RAD9A-206ENST00000541132 HOOK2Q96ED9 719 aa22.66■■□□□ 1.22
RAD9A-206ENST00000541132 ZCCHC17Q9NP64 241 aaKnown RBP22.66■■□□□ 1.22
RAD9A-206ENST00000541132 IRF6O14896 467 aa22.65■■□□□ 1.22
RAD9A-206ENST00000541132 LRRC24Q50LG9 513 aa22.65■■□□□ 1.22
RAD9A-206ENST00000541132 FAM83AQ86UY5 434 aa22.65■■□□□ 1.22
RAD9A-206ENST00000541132 ZDHHC15Q96MV8 337 aa22.65■■□□□ 1.22
RAD9A-206ENST00000541132 COLQQ9Y215 455 aaPredicted RBP22.65■■□□□ 1.22
RAD9A-206ENST00000541132 ECM2O94769 699 aaPredicted RBP22.64■■□□□ 1.21
RAD9A-206ENST00000541132 PPIL2Q13356 520 aa22.64■■□□□ 1.21
RAD9A-206ENST00000541132 MRIQ9BWK5 157 aa22.64■■□□□ 1.21
RAD9A-206ENST00000541132 BICC1Q9H694 974 aaKnown RBP22.64■■□□□ 1.21
RAD9A-206ENST00000541132 PDE8BO95263 885 aa22.63■■□□□ 1.21
RAD9A-206ENST00000541132 GNRH1P01148 92 aa22.63■■□□□ 1.21
RAD9A-206ENST00000541132 BCAMP50895 628 aa22.63■■□□□ 1.21
RAD9A-206ENST00000541132 DCAF15Q66K64 600 aa22.63■■□□□ 1.21
RAD9A-206ENST00000541132 MAST3O60307 1309 aa22.62■■□□□ 1.21
RAD9A-206ENST00000541132 PRMT2P55345 433 aa22.62■■□□□ 1.21
RAD9A-206ENST00000541132 FKBP1CQ5VVH2 108 aa22.62■■□□□ 1.21
RAD9A-206ENST00000541132 APOBEC3HQ6NTF7 200 aaKnown RBP22.62■■□□□ 1.21
RAD9A-206ENST00000541132 AK9Q5TCS8 1911 aa22.62■■□□□ 1.21
RAD9A-206ENST00000541132 UTYO14607 1347 aa22.61■■□□□ 1.21
RAD9A-206ENST00000541132 MYH13Q9UKX3 1938 aa22.61■■□□□ 1.21
RAD9A-206ENST00000541132 PPATQ06203 517 aa22.61■■□□□ 1.21
RAD9A-206ENST00000541132 RABL6Q3YEC7 729 aaPredicted RBP22.61■■□□□ 1.21
RAD9A-206ENST00000541132 MIGA2Q7L4E1 593 aa22.61■■□□□ 1.21
RAD9A-206ENST00000541132 VGLL2Q8N8G2 317 aa22.61■■□□□ 1.21
RAD9A-206ENST00000541132 ZNF341Q9BYN7 854 aa22.61■■□□□ 1.21
RAD9A-206ENST00000541132 SUGT1Q9Y2Z0 365 aa22.61■■□□□ 1.21
RAD9A-206ENST00000541132 H0YGN5 161 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms