RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SERPINA10Q9UK55 444 aa18.89■□□□□ 0.61
DDB1-218ENST00000540784 MAST3O60307 1309 aa18.89■□□□□ 0.61
DDB1-218ENST00000540784 SCN4AP35499 1836 aa18.88■□□□□ 0.61
DDB1-218ENST00000540784 PRDX5P30044 214 aa18.88■□□□□ 0.61
DDB1-218ENST00000540784 MTMR14Q8NCE2 650 aa18.88■□□□□ 0.61
DDB1-218ENST00000540784 OTUD7AQ8TE49 926 aaPredicted RBP18.88■□□□□ 0.61
DDB1-218ENST00000540784 ZC3H15Q8WU90 426 aaKnown RBP18.88■□□□□ 0.61
DDB1-218ENST00000540784 TEKT1Q969V4 418 aa18.88■□□□□ 0.61
DDB1-218ENST00000540784 RAI14Q9P0K7 980 aa18.88■□□□□ 0.61
DDB1-218ENST00000540784 TTC41PQ6P2S7 1318 aa18.88■□□□□ 0.61
DDB1-218ENST00000540784 PSME4Q14997 1843 aa18.88■□□□□ 0.61
DDB1-218ENST00000540784 ERC2O15083 957 aa18.87■□□□□ 0.61
DDB1-218ENST00000540784 POTEIP0CG38 1075 aa18.87■□□□□ 0.61
DDB1-218ENST00000540784 POTEJP0CG39 1038 aa18.87■□□□□ 0.61
DDB1-218ENST00000540784 MX1P20591 662 aa18.87■□□□□ 0.61
DDB1-218ENST00000540784 CRKP46108 304 aa18.87■□□□□ 0.61
DDB1-218ENST00000540784 TTF1Q15361 905 aaPredicted RBP18.87■□□□□ 0.61
DDB1-218ENST00000540784 DZIP1Q86YF9 867 aaKnown RBP18.87■□□□□ 0.61
DDB1-218ENST00000540784 SLF2Q8IX21 1173 aa18.87■□□□□ 0.61
DDB1-218ENST00000540784 RBM46Q8TBY0 533 aaKnown RBP18.87■□□□□ 0.61
DDB1-218ENST00000540784 DNAJC2Q99543 621 aaKnown RBP18.87■□□□□ 0.61
DDB1-218ENST00000540784 HAUS7Q99871 368 aa18.87■□□□□ 0.61
DDB1-218ENST00000540784 PGAP2Q9UHJ9 254 aa18.87■□□□□ 0.61
DDB1-218ENST00000540784 NDUFB9Q9Y6M9 179 aa18.87■□□□□ 0.61
DDB1-218ENST00000540784 WNT10BO00744 389 aa18.86■□□□□ 0.61
DDB1-218ENST00000540784 NBPF9Q3BBW0 867 aa18.86■□□□□ 0.61
DDB1-218ENST00000540784 CHADLQ6NUI6 762 aa18.86■□□□□ 0.61
DDB1-218ENST00000540784 HHIPL2Q6UWX4 724 aa18.86■□□□□ 0.61
DDB1-218ENST00000540784 CENPQQ7L2Z9 268 aaPredicted RBP18.86■□□□□ 0.61
DDB1-218ENST00000540784 PRMT6Q96LA8 375 aaPredicted RBP18.86■□□□□ 0.61
DDB1-218ENST00000540784 PIH1D3Q9NQM4 214 aaKnown RBP18.86■□□□□ 0.61
DDB1-218ENST00000540784 PPP4R2Q9NY27 417 aa18.86■□□□□ 0.61
DDB1-218ENST00000540784 STAP2Q9UGK3 403 aa18.86■□□□□ 0.61
DDB1-218ENST00000540784 GOLIM4O00461 696 aa18.85■□□□□ 0.61
DDB1-218ENST00000540784 MYO1BO43795 1136 aa18.85■□□□□ 0.61
DDB1-218ENST00000540784 IGSF3O75054 1194 aa18.85■□□□□ 0.61
DDB1-218ENST00000540784 GLRX3O76003 335 aaKnown RBP18.85■□□□□ 0.61
DDB1-218ENST00000540784 LDHCP07864 332 aa18.85■□□□□ 0.61
DDB1-218ENST00000540784 GSTO1P78417 241 aa18.85■□□□□ 0.61
DDB1-218ENST00000540784 MECOMQ03112 1051 aa18.85■□□□□ 0.61
DDB1-218ENST00000540784 TSHZ3Q63HK5 1081 aa18.85■□□□□ 0.61
DDB1-218ENST00000540784 SMC1BQ8NDV3 1235 aa18.85■□□□□ 0.61
DDB1-218ENST00000540784 DCPSQ96C86 337 aaKnown RBP18.85■□□□□ 0.61
DDB1-218ENST00000540784 ANTXR1Q9H6X2 564 aa18.85■□□□□ 0.61
DDB1-218ENST00000540784 SPDYE2BA6NHP3 402 aa18.84■□□□□ 0.61
DDB1-218ENST00000540784 IDH1O75874 414 aaKnown RBP18.84■□□□□ 0.61
DDB1-218ENST00000540784 SPDYE6P0CI01 402 aa18.84■□□□□ 0.61
DDB1-218ENST00000540784 PDE1AP54750 535 aa18.84■□□□□ 0.61
DDB1-218ENST00000540784 MAP3K12Q12852 859 aa18.84■□□□□ 0.61
DDB1-218ENST00000540784 DIXDC1Q155Q3 683 aa18.84■□□□□ 0.61
DDB1-218ENST00000540784 ZBED3Q96IU2 234 aaPredicted RBP18.84■□□□□ 0.61
DDB1-218ENST00000540784 ZDHHC15Q96MV8 337 aa18.84■□□□□ 0.61
DDB1-218ENST00000540784 PAG1Q9NWQ8 432 aa18.84■□□□□ 0.61
DDB1-218ENST00000540784 PCDHAC2Q9Y5I4 1007 aa18.84■□□□□ 0.61
DDB1-218ENST00000540784 SALL3Q9BXA9 1300 aa18.83■□□□□ 0.61
DDB1-218ENST00000540784 MAP1SQ66K74 1059 aaPredicted RBP18.83■□□□□ 0.6
DDB1-218ENST00000540784 CNTROBQ8N137 903 aa18.83■□□□□ 0.6
DDB1-218ENST00000540784 NSUN4Q96CB9 384 aaKnown RBP18.83■□□□□ 0.6
DDB1-218ENST00000540784 FAM163AQ96GL9 167 aaPredicted RBP18.83■□□□□ 0.6
DDB1-218ENST00000540784 ZNF646O15015 1829 aaPredicted RBP18.82■□□□□ 0.6
DDB1-218ENST00000540784 FSTL1Q12841 308 aa18.82■□□□□ 0.6
DDB1-218ENST00000540784 ANGEL2Q5VTE6 544 aaKnown RBP18.82■□□□□ 0.6
DDB1-218ENST00000540784 NAA16Q6N069 864 aaPredicted RBP18.82■□□□□ 0.6
DDB1-218ENST00000540784 PI4K2BQ8TCG2 481 aa18.82■□□□□ 0.6
DDB1-218ENST00000540784 EDC3Q96F86 508 aaKnown RBP18.82■□□□□ 0.6
DDB1-218ENST00000540784 ASTN2O75129 1339 aaPredicted RBP18.81■□□□□ 0.6
DDB1-218ENST00000540784 APOBEC3HQ6NTF7 200 aaKnown RBP18.81■□□□□ 0.6
DDB1-218ENST00000540784 CDC37L1Q7L3B6 337 aa18.81■□□□□ 0.6
DDB1-218ENST00000540784 PLEKHM2Q8IWE5 1019 aa18.81■□□□□ 0.6
DDB1-218ENST00000540784 TDRD3Q9H7E2 651 aaKnown RBP18.81■□□□□ 0.6
DDB1-218ENST00000540784 GGA3Q9NZ52 723 aa18.81■□□□□ 0.6
DDB1-218ENST00000540784 DAGLAQ9Y4D2 1042 aa18.81■□□□□ 0.6
DDB1-218ENST00000540784 MAP4K4O95819 1239 aaPredicted RBP18.8■□□□□ 0.6
DDB1-218ENST00000540784 USP48Q86UV5 1035 aa18.8■□□□□ 0.6
DDB1-218ENST00000540784 SULF1Q8IWU6 871 aa18.8■□□□□ 0.6
DDB1-218ENST00000540784 ZNF384Q8TF68 577 aa18.8■□□□□ 0.6
DDB1-218ENST00000540784 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.8■□□□□ 0.63e-7■■■■□ 24.5
DDB1-218ENST00000540784 ZNF70Q9UC06 446 aaPredicted RBP18.8■□□□□ 0.6
DDB1-218ENST00000540784 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
DDB1-218ENST00000540784 AKAP11Q9UKA4 1901 aa18.79■□□□□ 0.6
DDB1-218ENST00000540784 CLRN2A0PK11 232 aa18.79■□□□□ 0.6
DDB1-218ENST00000540784 CYP7A1P22680 504 aa18.79■□□□□ 0.6
DDB1-218ENST00000540784 PDE4AP27815 886 aa18.79■□□□□ 0.6
DDB1-218ENST00000540784 SLC9C2Q5TAH2 1124 aa18.79■□□□□ 0.6
DDB1-218ENST00000540784 TMED8Q6PL24 325 aaPredicted RBP18.79■□□□□ 0.6
DDB1-218ENST00000540784 KRT26Q7Z3Y9 468 aa18.79■□□□□ 0.6
DDB1-218ENST00000540784 MAGEB6Q8N7X4 407 aa18.79■□□□□ 0.6
DDB1-218ENST00000540784 NOL10Q9BSC4 688 aaKnown RBP18.79■□□□□ 0.6
DDB1-218ENST00000540784 OSBPL3Q9H4L5 887 aa18.79■□□□□ 0.6
DDB1-218ENST00000540784 USP40Q9NVE5 1235 aa18.79■□□□□ 0.6
DDB1-218ENST00000540784 MROH7-TTC4A0A0A0MT08 1334 aa18.78■□□□□ 0.6
DDB1-218ENST00000540784 GAKO14976 1311 aa18.78■□□□□ 0.6
DDB1-218ENST00000540784 AOX1Q06278 1338 aa18.78■□□□□ 0.6
DDB1-218ENST00000540784 PITPNM2Q9BZ72 1349 aa18.78■□□□□ 0.6
DDB1-218ENST00000540784 GPR75-ASB3A0A0A6YYF3 556 aa18.78■□□□□ 0.6
DDB1-218ENST00000540784 ITGBL1O95965 494 aaPredicted RBP18.78■□□□□ 0.6
DDB1-218ENST00000540784 SPDYE2Q495Y8 402 aa18.78■□□□□ 0.6
DDB1-218ENST00000540784 APOBEC3FQ8IUX4 373 aaKnown RBP18.78■□□□□ 0.6
DDB1-218ENST00000540784 GLIS2Q9BZE0 524 aaPredicted RBP18.78■□□□□ 0.6
DDB1-218ENST00000540784 VEZTQ9HBM0 779 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms