RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	PRR5L	Q6MZQ0	368 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	DDX11	Q96FC9	970 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CLIP2	Q9UDT6	1046 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	XDH	P47989	1333 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ZNF75D	P51815	510 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TTF1	Q15361	905 aa	Predicted RBP	6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	BEND3	Q5T5X7	828 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TBC1D22A	Q8WUA7	517 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	HOOK2	Q96ED9	719 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	FEZ1	Q99689	392 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TPCN1	Q9ULQ1	816 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PEAK1	Q9H792	1746 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SMTNL1	A8MU46	457 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783		H7C1D1	291 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	EYA2	O00167	538 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PPFIA3	O75145	1194 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	KRT85	P78386	507 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	FILIP1	Q7Z7B0	1213 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	DZIP1	Q86YF9	867 aa	Known RBP	6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ZNF215	Q9UL58	517 aa	Predicted RBP	6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CYP46A1	Q9Y6A2	500 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	NR1I2	O75469	434 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	NBPF7	P0C2Y1	421 aa	Predicted RBP	6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SLFN14	P0C7P3	912 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ZNF165	P49910	485 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	HLF	Q16534	295 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CERS3	Q8IU89	383 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CNTROB	Q8N137	903 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	BICD2	Q8TD16	824 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ERCC4	Q92889	916 aa	Predicted RBP	6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SPATA32	Q96LK8	384 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	LRP2BP	Q9P2M1	347 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CLEC11A	Q9Y240	323 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783		H7C1W4	665 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SLC3A2	P08195	630 aa	Known RBP	6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PUM3	Q15397	648 aa	Known RBP	6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CEP135	Q66GS9	1140 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	AACS	Q86V21	672 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	DDX41	Q9UJV9	622 aa	Known RBP	6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TAF6L	Q9Y6J9	622 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	MARF1	Q9Y4F3	1742 aa	Known RBP	6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	MAP3K12	Q12852	859 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	UBE4A	Q14139	1066 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SF3B3	Q15393	1217 aa	Known RBP	6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	KMT5B	Q4FZB7	885 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SLC10A5	Q5PT55	438 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SP8	Q8IXZ3	490 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TMEM51	Q9NW97	253 aa		6.61	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	BAG3	O95817	575 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	KIF18A	Q8NI77	898 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	WDR66	Q8TBY9	1149 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	RAI14	Q9P0K7	980 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	DENND2A	Q9ULE3	1009 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PLCG2	P16885	1265 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	HIBADH	P31937	336 aa	Known RBP	6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TNNI2	P48788	182 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ELF2	Q15723	593 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	IFFO2	Q5TF58	517 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CCDC24	Q8N4L8	307 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	FAM227B	Q96M60	508 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	BICC1	Q9H694	974 aa	Known RBP	6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PA2G4	Q9UQ80	394 aa	Known RBP	6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ABCA3	Q99758	1704 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	IQCA1L	A6NCM1	817 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	DPEP1	P16444	411 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PTF1A	Q7RTS3	328 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SSH3	Q8TE77	659 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	LPIN2	Q92539	896 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PLA2G12B	Q9BX93	195 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	NACAP1	Q9BZK3	213 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	VPS33B	Q9H267	617 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	GJA3	Q9Y6H8	435 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	MRC1	P22897	1456 aa		6.6	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	POLRMT	O00411	1230 aa	Known RBP	6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	YY1	P25490	414 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	COL18A1	P39060	1754 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	JAK2	O60674	1132 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	GLRX3	O76003	335 aa	Known RBP	6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SKIL	P12757	684 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TERF2	Q15554	542 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PTPN14	Q15678	1187 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	VPS53	Q5VIR6	699 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	FBXO38	Q6PIJ6	1188 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PLA2G4D	Q86XP0	818 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	LEO1	Q8WVC0	666 aa	Predicted RBP	6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	IL17RA	Q96F46	866 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SUCLG2	Q96I99	432 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PGBD1	Q96JS3	809 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	BSDC1	Q9NW68	430 aa	Predicted RBP	6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	WWC3	Q9ULE0	1092 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	RBM8A	Q9Y5S9	174 aa	Known RBP	6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	MYO3B	Q8WXR4	1341 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	LRRC37A3	O60309	1634 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	LRP5	O75197	1615 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	C21orf2	O43822	256 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CIAO1	O76071	339 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	NTSR2	O95665	410 aa		6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ZKSCAN1	P17029	563 aa	Predicted RBP	6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	C11orf57	Q6ZUT1	292 aa	Predicted RBP	6.59	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SLC4A9	Q96Q91	983 aa		6.59	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms