RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 TBC1D16Q8TBP0 767 aa17.07■□□□□ 0.32
CYB561A3-216ENST00000540755 DSCC1Q9BVC3 393 aa17.07■□□□□ 0.32
CYB561A3-216ENST00000540755 TBC1D2Q9BYX2 928 aa17.07■□□□□ 0.32
CYB561A3-216ENST00000540755 DAXXQ9UER7 740 aaPredicted RBP17.07■□□□□ 0.32
CYB561A3-216ENST00000540755 IQSEC3Q9UPP2 1182 aaPredicted RBP17.07■□□□□ 0.32
CYB561A3-216ENST00000540755 TCRBV5S4A2TA0A5A2 114 aa17.06■□□□□ 0.32
CYB561A3-216ENST00000540755 M0R2C6 588 aa17.06■□□□□ 0.32
CYB561A3-216ENST00000540755 IGSF3O75054 1194 aa17.06■□□□□ 0.32
CYB561A3-216ENST00000540755 CCDC93Q567U6 631 aa17.06■□□□□ 0.32
CYB561A3-216ENST00000540755 ERICH6Q7L0X2 663 aa17.06■□□□□ 0.32
CYB561A3-216ENST00000540755 TMX4Q9H1E5 349 aaPredicted RBP17.06■□□□□ 0.32
CYB561A3-216ENST00000540755 POLLQ9UGP5 575 aa17.06■□□□□ 0.32
CYB561A3-216ENST00000540755 ZNF532Q9HCE3 1301 aa17.06■□□□□ 0.32
CYB561A3-216ENST00000540755 FRAT2O75474 233 aaPredicted RBP17.05■□□□□ 0.32
CYB561A3-216ENST00000540755 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
CYB561A3-216ENST00000540755 TDRD7Q8NHU6 1098 aaKnown RBP17.05■□□□□ 0.32
CYB561A3-216ENST00000540755 SNX14Q9Y5W7 946 aa17.05■□□□□ 0.32
CYB561A3-216ENST00000540755 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
CYB561A3-216ENST00000540755 RNF20Q5VTR2 975 aa17.05■□□□□ 0.32
CYB561A3-216ENST00000540755 CREB3L3Q68CJ9 461 aa17.05■□□□□ 0.32
CYB561A3-216ENST00000540755 MPNDQ8N594 471 aa17.05■□□□□ 0.32
CYB561A3-216ENST00000540755 KLRG1Q96E93 195 aa17.05■□□□□ 0.32
CYB561A3-216ENST00000540755 PUS7LQ9H0K6 701 aaKnown RBP17.05■□□□□ 0.32
CYB561A3-216ENST00000540755 LRP2BPQ9P2M1 347 aa17.05■□□□□ 0.32
CYB561A3-216ENST00000540755 SALL1Q9NSC2 1324 aa17.04■□□□□ 0.32
CYB561A3-216ENST00000540755 HSPD1P10809 573 aaKnown RBP17.04■□□□□ 0.32
CYB561A3-216ENST00000540755 IL1R1P14778 569 aa17.04■□□□□ 0.32
CYB561A3-216ENST00000540755 ZKSCAN1P17029 563 aaPredicted RBP17.04■□□□□ 0.32
CYB561A3-216ENST00000540755 IFFO2Q5TF58 517 aa17.04■□□□□ 0.32
CYB561A3-216ENST00000540755 TMED8Q6PL24 325 aaPredicted RBP17.04■□□□□ 0.32
CYB561A3-216ENST00000540755 RASEFQ8IZ41 740 aa17.04■□□□□ 0.32
CYB561A3-216ENST00000540755 MAGEB6Q8N7X4 407 aa17.04■□□□□ 0.32
CYB561A3-216ENST00000540755 COL4A5P29400 1685 aa17.04■□□□□ 0.32
CYB561A3-216ENST00000540755 C6orf229H3BNL8 230 aa17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 SLC27A2O14975 620 aa17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 GPAA1O43292 621 aa17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 ST18O60284 1047 aa17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 DDNO94850 711 aaPredicted RBP17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 TSGA10IPQ3SY00 556 aa17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 DPP8Q6V1X1 898 aaPredicted RBP17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 ZGPATQ8N5A5 531 aaKnown RBP17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 JMYQ8N9B5 988 aa17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 CD209Q9NNX6 404 aa17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 ZNF277Q9NRM2 450 aaPredicted RBP17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 ABCF2Q9UG63 623 aa17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 ZNF541Q9H0D2 1346 aa17.03■□□□□ 0.32
CYB561A3-216ENST00000540755 VPS53Q5VIR6 699 aa17.02■□□□□ 0.32
CYB561A3-216ENST00000540755 CC2D2BQ6DHV5 1058 aa17.02■□□□□ 0.32
CYB561A3-216ENST00000540755 WDR66Q8TBY9 1149 aa17.02■□□□□ 0.32
CYB561A3-216ENST00000540755 GPR101Q96P66 508 aaPredicted RBP17.02■□□□□ 0.32
CYB561A3-216ENST00000540755 TM6SF1Q9BZW5 370 aa17.02■□□□□ 0.32
CYB561A3-216ENST00000540755 LAMA4Q16363 1823 aa17.01■□□□□ 0.31
CYB561A3-216ENST00000540755 POTEIP0CG38 1075 aa17.01■□□□□ 0.31
CYB561A3-216ENST00000540755 POTEJP0CG39 1038 aa17.01■□□□□ 0.31
CYB561A3-216ENST00000540755 SLC4A3P48751 1232 aa17.01■□□□□ 0.31
CYB561A3-216ENST00000540755 EYA3Q99504 573 aa17.01■□□□□ 0.31
CYB561A3-216ENST00000540755 RAI14Q9P0K7 980 aa17.01■□□□□ 0.31
CYB561A3-216ENST00000540755 SCN4AP35499 1836 aa17.01■□□□□ 0.31
CYB561A3-216ENST00000540755 CD2BP2O95400 341 aaKnown RBP17■□□□□ 0.31
CYB561A3-216ENST00000540755 CHAF1AQ13111 956 aaPredicted RBP17■□□□□ 0.31
CYB561A3-216ENST00000540755 SPTY2D1Q68D10 685 aaPredicted RBP17■□□□□ 0.31
CYB561A3-216ENST00000540755 AIDAQ96BJ3 306 aa17■□□□□ 0.31
CYB561A3-216ENST00000540755 L3MBTL3Q96JM7 780 aaPredicted RBP17■□□□□ 0.31
CYB561A3-216ENST00000540755 COA1Q9GZY4 146 aa17■□□□□ 0.31
CYB561A3-216ENST00000540755 RPAP1Q9BWH6 1393 aaPredicted RBP17■□□□□ 0.31
CYB561A3-216ENST00000540755 ADAMTSL1Q8N6G6 1762 aa16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 K7ELQ4 463 aaPredicted RBP16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 FOXP2O15409 715 aa16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 MCM2P49736 904 aa16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 NEK4P51957 841 aa16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 RTKN2Q8IZC4 609 aa16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 RTFDC1Q9BY42 306 aaPredicted RBP16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 ZC3H12CQ9C0D7 883 aaKnown RBP16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 CTNNA3Q9UI47 895 aa16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 CYP7A1P22680 504 aa16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 PSMA5P28066 241 aa16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 KRT32Q14532 448 aa16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 NSUN4Q96CB9 384 aaKnown RBP16.99■□□□□ 0.31
CYB561A3-216ENST00000540755 MBD4O95243 580 aa16.98■□□□□ 0.31
CYB561A3-216ENST00000540755 CYP21A2P08686 494 aa16.98■□□□□ 0.31
CYB561A3-216ENST00000540755 GNAT2P19087 354 aa16.98■□□□□ 0.31
CYB561A3-216ENST00000540755 ADCK5Q3MIX3 580 aa16.98■□□□□ 0.31
CYB561A3-216ENST00000540755 NAA16Q6N069 864 aaPredicted RBP16.98■□□□□ 0.31
CYB561A3-216ENST00000540755 ZSWIM6Q9HCJ5 1215 aa16.98■□□□□ 0.31
CYB561A3-216ENST00000540755 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
CYB561A3-216ENST00000540755 FAM205AQ6ZU69 1335 aa16.98■□□□□ 0.31
CYB561A3-216ENST00000540755 CASTP20810 708 aaKnown RBP16.97■□□□□ 0.31
CYB561A3-216ENST00000540755 PRDX5P30044 214 aa16.97■□□□□ 0.31
CYB561A3-216ENST00000540755 IARSP41252 1262 aaKnown RBP16.97■□□□□ 0.31
CYB561A3-216ENST00000540755 MECOMQ03112 1051 aa16.97■□□□□ 0.31
CYB561A3-216ENST00000540755 ZNF384Q8TF68 577 aa16.97■□□□□ 0.31
CYB561A3-216ENST00000540755 TBC1D22AQ8WUA7 517 aa16.97■□□□□ 0.31
CYB561A3-216ENST00000540755 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
CYB561A3-216ENST00000540755 PSMD1Q99460 953 aa16.97■□□□□ 0.31
CYB561A3-216ENST00000540755 UPF3BQ9BZI7 483 aaKnown RBP16.97■□□□□ 0.31
CYB561A3-216ENST00000540755 RIMBP2O15034 1052 aa16.96■□□□□ 0.31
CYB561A3-216ENST00000540755 FGAP02671 866 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms