RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 LRRC14Q15048 493 aa10.64□□□□□ -0.71
TRAV11-201ENST00000539512 TTBK2Q6IQ55 1244 aa10.64□□□□□ -0.71
TRAV11-201ENST00000539512 BEND7Q8N7W2 519 aaPredicted RBP10.64□□□□□ -0.71
TRAV11-201ENST00000539512 CORO1BQ9BR76 489 aa10.64□□□□□ -0.71
TRAV11-201ENST00000539512 NME2P22392 152 aa10.63□□□□□ -0.71
TRAV11-201ENST00000539512 LIG3P49916 1009 aa10.63□□□□□ -0.71
TRAV11-201ENST00000539512 SNRPNP63162 240 aaKnown RBP10.63□□□□□ -0.71
TRAV11-201ENST00000539512 HP1BP3Q5SSJ5 553 aaPredicted RBP10.63□□□□□ -0.71
TRAV11-201ENST00000539512 ZNF654Q8IZM8 581 aa10.63□□□□□ -0.71
TRAV11-201ENST00000539512 PLVAPQ9BX97 442 aa10.63□□□□□ -0.71
TRAV11-201ENST00000539512 IGSF5Q9NSI5 407 aa10.63□□□□□ -0.71
TRAV11-201ENST00000539512 SUZ12Q15022 739 aaKnown RBP10.62□□□□□ -0.71
TRAV11-201ENST00000539512 PCNX4Q63HM2 1172 aa10.62□□□□□ -0.71
TRAV11-201ENST00000539512 RSRP1Q9BUV0 290 aa10.62□□□□□ -0.71
TRAV11-201ENST00000539512 USP26Q9BXU7 913 aa10.62□□□□□ -0.71
TRAV11-201ENST00000539512 KBTBD4Q9NVX7 518 aa10.62□□□□□ -0.71
TRAV11-201ENST00000539512 FAM181BA6NEQ2 426 aa10.61□□□□□ -0.71
TRAV11-201ENST00000539512 ARNTP27540 789 aa10.61□□□□□ -0.71
TRAV11-201ENST00000539512 ERMP1Q7Z2K6 904 aa10.61□□□□□ -0.71
TRAV11-201ENST00000539512 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.61□□□□□ -0.71
TRAV11-201ENST00000539512 MINDY4BA8MYZ0 360 aa10.6□□□□□ -0.71
TRAV11-201ENST00000539512 CD68P34810 354 aaPredicted RBP10.6□□□□□ -0.71
TRAV11-201ENST00000539512 NLRP12P59046 1061 aa10.6□□□□□ -0.71
TRAV11-201ENST00000539512 RPS26P62854 115 aaKnown RBP10.6□□□□□ -0.71
TRAV11-201ENST00000539512 SETDB1Q15047 1291 aa10.6□□□□□ -0.71
TRAV11-201ENST00000539512 LLGL2Q6P1M3 1020 aa10.6□□□□□ -0.71
TRAV11-201ENST00000539512 METTL16Q86W50 562 aaKnown RBP10.6□□□□□ -0.71
TRAV11-201ENST00000539512 SCARF2Q96GP6 870 aaPredicted RBP10.6□□□□□ -0.71
TRAV11-201ENST00000539512 TMEM74Q96NL1 305 aa10.6□□□□□ -0.71
TRAV11-201ENST00000539512 TRIM56Q9BRZ2 755 aaKnown RBP10.6□□□□□ -0.71
TRAV11-201ENST00000539512 TGIF2Q9GZN2 237 aa10.6□□□□□ -0.71
TRAV11-201ENST00000539512 A0A0A0MRY4 1105 aa10.59□□□□□ -0.71
TRAV11-201ENST00000539512 F6X3S4 739 aa10.59□□□□□ -0.71
TRAV11-201ENST00000539512 PAGE1O75459 146 aa10.59□□□□□ -0.71
TRAV11-201ENST00000539512 GNL2Q13823 731 aaKnown RBP10.59□□□□□ -0.71
TRAV11-201ENST00000539512 COL9A3Q14050 684 aaPredicted RBP10.59□□□□□ -0.71
TRAV11-201ENST00000539512 POU4F3Q15319 338 aa10.59□□□□□ -0.71
TRAV11-201ENST00000539512 ZNF394Q53GI3 561 aa10.59□□□□□ -0.71
TRAV11-201ENST00000539512 LINC00114Q6XXX2 140 aa10.59□□□□□ -0.71
TRAV11-201ENST00000539512 FMR1NBQ8N0W7 255 aaPredicted RBP10.59□□□□□ -0.71
TRAV11-201ENST00000539512 TRIM11Q96F44 468 aa10.59□□□□□ -0.71
TRAV11-201ENST00000539512 KLHDC7BQ96G42 594 aa10.59□□□□□ -0.71
TRAV11-201ENST00000539512 CYP8B1Q9UNU6 501 aa10.59□□□□□ -0.71
TRAV11-201ENST00000539512 PCDHGB7Q9Y5F8 929 aa10.59□□□□□ -0.71
TRAV11-201ENST00000539512 HOXB4P17483 251 aaPredicted RBP10.58□□□□□ -0.72
TRAV11-201ENST00000539512 PDE3AQ14432 1141 aa10.58□□□□□ -0.72
TRAV11-201ENST00000539512 SNAP47Q5SQN1 464 aa10.58□□□□□ -0.72
TRAV11-201ENST00000539512 HGSNATQ68CP4 663 aa10.58□□□□□ -0.72
TRAV11-201ENST00000539512 FBXO11Q86XK2 927 aa10.58□□□□□ -0.72
TRAV11-201ENST00000539512 KCNB2Q92953 911 aa10.58□□□□□ -0.72
TRAV11-201ENST00000539512 ACSBG1Q96GR2 724 aa10.58□□□□□ -0.72
TRAV11-201ENST00000539512 MIR1-1HGQ9H1L0 117 aa10.58□□□□□ -0.72
TRAV11-201ENST00000539512 COPRSQ9NQ92 184 aa10.58□□□□□ -0.72
TRAV11-201ENST00000539512 ADAMTS8Q9UP79 889 aa10.58□□□□□ -0.72
TRAV11-201ENST00000539512 GSTP1P09211 210 aaKnown RBP10.57□□□□□ -0.72
TRAV11-201ENST00000539512 MAOBP27338 520 aa10.57□□□□□ -0.72
TRAV11-201ENST00000539512 ZC3H6P61129 1189 aaKnown RBP10.57□□□□□ -0.72
TRAV11-201ENST00000539512 MAP1SQ66K74 1059 aaPredicted RBP10.56□□□□□ -0.72
TRAV11-201ENST00000539512 AGMOQ6ZNB7 445 aa10.56□□□□□ -0.72
TRAV11-201ENST00000539512 GALNT11Q8NCW6 608 aa10.56□□□□□ -0.72
TRAV11-201ENST00000539512 PHC3Q8NDX5 983 aa10.56□□□□□ -0.72
TRAV11-201ENST00000539512 ZC3H12CQ9C0D7 883 aaKnown RBP10.56□□□□□ -0.72
TRAV11-201ENST00000539512 DDX41Q9UJV9 622 aaKnown RBP10.56□□□□□ -0.72
TRAV11-201ENST00000539512 INPP5FQ9Y2H2 1132 aa10.56□□□□□ -0.72
TRAV11-201ENST00000539512 FAM229AH3BQW9 127 aa10.55□□□□□ -0.72
TRAV11-201ENST00000539512 DEAF1O75398 565 aaPredicted RBP10.55□□□□□ -0.72
TRAV11-201ENST00000539512 ELNP15502 786 aa10.55□□□□□ -0.72
TRAV11-201ENST00000539512 DUOXA2Q1HG44 320 aa10.55□□□□□ -0.72
TRAV11-201ENST00000539512 SPON2Q9BUD6 331 aa10.55□□□□□ -0.72
TRAV11-201ENST00000539512 TLR6Q9Y2C9 796 aa10.55□□□□□ -0.72
TRAV11-201ENST00000539512 CNTNAP5Q8WYK1 1306 aa10.55□□□□□ -0.72
TRAV11-201ENST00000539512 EIF4A3P38919 411 aaKnown RBP10.54□□□□□ -0.72
TRAV11-201ENST00000539512 KIAA0825Q8IV33 1275 aa10.54□□□□□ -0.72
TRAV11-201ENST00000539512 RAD18Q9NS91 495 aa10.54□□□□□ -0.72
TRAV11-201ENST00000539512 DDX3YO15523 660 aaKnown RBP10.53□□□□□ -0.72
TRAV11-201ENST00000539512 BPNT1O95861 308 aa10.53□□□□□ -0.72
TRAV11-201ENST00000539512 PF4P02776 101 aa10.53□□□□□ -0.72
TRAV11-201ENST00000539512 BMP6P22004 513 aa10.53□□□□□ -0.72
TRAV11-201ENST00000539512 LMNB2Q03252 620 aa10.53□□□□□ -0.72
TRAV11-201ENST00000539512 FAM160A1Q05DH4 1040 aa10.53□□□□□ -0.72
TRAV11-201ENST00000539512 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
TRAV11-201ENST00000539512 CAMK2GQ13555 558 aaPredicted RBP10.53□□□□□ -0.72
TRAV11-201ENST00000539512 SCARA3Q6AZY7 606 aa10.53□□□□□ -0.72
TRAV11-201ENST00000539512 CAPN10Q9HC96 672 aa10.53□□□□□ -0.72
TRAV11-201ENST00000539512 SUPT16HQ9Y5B9 1047 aaKnown RBP10.53□□□□□ -0.72
TRAV11-201ENST00000539512 APBA3O96018 575 aa10.52□□□□□ -0.73
TRAV11-201ENST00000539512 SPATA31C1P0DKV0 1188 aa10.52□□□□□ -0.73
TRAV11-201ENST00000539512 FOXD4L6Q3SYB3 417 aaPredicted RBP10.52□□□□□ -0.73
TRAV11-201ENST00000539512 FOXD4L3Q6VB84 417 aaPredicted RBP10.52□□□□□ -0.73
TRAV11-201ENST00000539512 ACAD11Q709F0 780 aa10.52□□□□□ -0.73
TRAV11-201ENST00000539512 GOLM1Q8NBJ4 401 aa10.52□□□□□ -0.73
TRAV11-201ENST00000539512 GRIN3AQ8TCU5 1115 aa10.52□□□□□ -0.73
TRAV11-201ENST00000539512 STK35Q8TDR2 534 aa10.52□□□□□ -0.73
TRAV11-201ENST00000539512 JARID2Q92833 1246 aaPredicted RBP10.52□□□□□ -0.73
TRAV11-201ENST00000539512 NACC1Q96RE7 527 aa10.52□□□□□ -0.73
TRAV11-201ENST00000539512 ACBD3Q9H3P7 528 aa10.52□□□□□ -0.73
TRAV11-201ENST00000539512 DLL1O00548 723 aa10.51□□□□□ -0.73
TRAV11-201ENST00000539512 TRIM37O94972 964 aa10.51□□□□□ -0.73
TRAV11-201ENST00000539512 TFE3P19532 575 aaPredicted RBP10.51□□□□□ -0.73
TRAV11-201ENST00000539512 IGF2-ASQ6U949 168 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms