RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 IGKV5-2P06315 115 aa15.47■□□□□ 0.07
YBX3-207ENST00000539204 OSBPP22059 807 aa15.47■□□□□ 0.07
YBX3-207ENST00000539204 TNNI2P48788 182 aa15.47■□□□□ 0.07
YBX3-207ENST00000539204 KSR2Q6VAB6 950 aa15.47■□□□□ 0.07
YBX3-207ENST00000539204 C15orf52Q6ZUT6 534 aaKnown RBP15.47■□□□□ 0.07
YBX3-207ENST00000539204 ERO1BQ86YB8 467 aa15.47■□□□□ 0.07
YBX3-207ENST00000539204 DEFB123Q8N688 67 aa15.47■□□□□ 0.07
YBX3-207ENST00000539204 CHMP4AQ9BY43 222 aa15.47■□□□□ 0.07
YBX3-207ENST00000539204 TDRD3Q9H7E2 651 aaKnown RBP15.47■□□□□ 0.07
YBX3-207ENST00000539204 MBIPQ9NS73 344 aa15.47■□□□□ 0.07
YBX3-207ENST00000539204 JAG2Q9Y219 1238 aa15.47■□□□□ 0.07
YBX3-207ENST00000539204 TCP10L2B9ZVM9 353 aa15.46■□□□□ 0.07
YBX3-207ENST00000539204 SNAP23O00161 211 aa15.46■□□□□ 0.07
YBX3-207ENST00000539204 TAF5LO75529 589 aa15.46■□□□□ 0.07
YBX3-207ENST00000539204 SGPL1O95470 568 aa15.46■□□□□ 0.07
YBX3-207ENST00000539204 CTGFP29279 349 aa15.46■□□□□ 0.07
YBX3-207ENST00000539204 TMEM39BQ9GZU3 492 aa15.46■□□□□ 0.07
YBX3-207ENST00000539204 CPA4Q9UI42 421 aa15.46■□□□□ 0.07
YBX3-207ENST00000539204 SERPINA10Q9UK55 444 aa15.46■□□□□ 0.07
YBX3-207ENST00000539204 STXBP5LQ9Y2K9 1186 aa15.46■□□□□ 0.07
YBX3-207ENST00000539204 MYPNQ86TC9 1320 aa15.45■□□□□ 0.06
YBX3-207ENST00000539204 PI4KAP2A4QPH2 592 aa15.45■□□□□ 0.06
YBX3-207ENST00000539204 H7C1W4 665 aa15.45■□□□□ 0.06
YBX3-207ENST00000539204 IRF6O14896 467 aa15.45■□□□□ 0.06
YBX3-207ENST00000539204 TFRCP02786 760 aaKnown RBP15.45■□□□□ 0.06
YBX3-207ENST00000539204 CAPN2P17655 700 aa15.45■□□□□ 0.06
YBX3-207ENST00000539204 UBE3BQ7Z3V4 1068 aa15.45■□□□□ 0.06
YBX3-207ENST00000539204 CDAN1Q8IWY9 1227 aa15.45■□□□□ 0.06
YBX3-207ENST00000539204 PI4KAP1Q8N8J0 262 aa15.45■□□□□ 0.06
YBX3-207ENST00000539204 RUNDC1Q96C34 613 aa15.45■□□□□ 0.06
YBX3-207ENST00000539204 COL25A1Q9BXS0 654 aaPredicted RBP15.45■□□□□ 0.06
YBX3-207ENST00000539204 IRS2Q9Y4H2 1338 aa15.44■□□□□ 0.06
YBX3-207ENST00000539204 UNC80Q8N2C7 3258 aa15.44■□□□□ 0.06
YBX3-207ENST00000539204 CWF19L2Q2TBE0 894 aaKnown RBP15.44■□□□□ 0.06
YBX3-207ENST00000539204 CCDC30Q5VVM6 783 aa15.44■□□□□ 0.06
YBX3-207ENST00000539204 DZIP1LQ8IYY4 767 aaKnown RBP15.44■□□□□ 0.06
YBX3-207ENST00000539204 TTF2Q9UNY4 1162 aaKnown RBP15.44■□□□□ 0.06
YBX3-207ENST00000539204 ECM29Q5VYK3 1845 aa15.43■□□□□ 0.06
YBX3-207ENST00000539204 CSF1RP07333 972 aa15.43■□□□□ 0.06
YBX3-207ENST00000539204 BMP8BP34820 402 aa15.43■□□□□ 0.06
YBX3-207ENST00000539204 PPIL2Q13356 520 aa15.43■□□□□ 0.06
YBX3-207ENST00000539204 ZKSCAN4Q969J2 545 aaPredicted RBP15.43■□□□□ 0.06
YBX3-207ENST00000539204 PLA2G12BQ9BX93 195 aa15.43■□□□□ 0.06
YBX3-207ENST00000539204 UNC93B1Q9H1C4 597 aa15.43■□□□□ 0.06
YBX3-207ENST00000539204 SNCAIPQ9Y6H5 919 aa15.43■□□□□ 0.06
YBX3-207ENST00000539204 ANKRD18BA2A2Z9 1011 aa15.42■□□□□ 0.06
YBX3-207ENST00000539204 NEURL1BA8MQ27 555 aa15.42■□□□□ 0.06
YBX3-207ENST00000539204 MFSD14BQ5SR56 506 aa15.42■□□□□ 0.06
YBX3-207ENST00000539204 Q7L0L9 218 aa15.42■□□□□ 0.06
YBX3-207ENST00000539204 ANKRD23Q86SG2 305 aa15.42■□□□□ 0.06
YBX3-207ENST00000539204 SLAIN1Q8ND83 568 aa15.42■□□□□ 0.06
YBX3-207ENST00000539204 WRNIP1Q96S55 665 aa15.42■□□□□ 0.06
YBX3-207ENST00000539204 SPEF2Q9C093 1822 aa15.41■□□□□ 0.06
YBX3-207ENST00000539204 PDHXO00330 501 aa15.41■□□□□ 0.06
YBX3-207ENST00000539204 ZNF853P0CG23 659 aa15.41■□□□□ 0.06
YBX3-207ENST00000539204 FCGRTP55899 365 aa15.41■□□□□ 0.06
YBX3-207ENST00000539204 PRKCZQ05513 592 aa15.41■□□□□ 0.06
YBX3-207ENST00000539204 PPATQ06203 517 aa15.41■□□□□ 0.06
YBX3-207ENST00000539204 HOOK2Q96ED9 719 aa15.41■□□□□ 0.06
YBX3-207ENST00000539204 GDF15Q99988 308 aa15.41■□□□□ 0.06
YBX3-207ENST00000539204 FAM205AQ6ZU69 1335 aa15.41■□□□□ 0.06
YBX3-207ENST00000539204 ZSWIM8A7E2V4 1837 aa15.4■□□□□ 0.06
YBX3-207ENST00000539204 GNAI1P63096 354 aa15.4■□□□□ 0.06
YBX3-207ENST00000539204 LRIT3Q3SXY7 679 aa15.4■□□□□ 0.06
YBX3-207ENST00000539204 C8orf58Q8NAV2 365 aa15.4■□□□□ 0.06
YBX3-207ENST00000539204 MTMR10Q9NXD2 777 aa15.4■□□□□ 0.06
YBX3-207ENST00000539204 OTOFQ9HC10 1997 aa15.4■□□□□ 0.06
YBX3-207ENST00000539204 ADCY3O60266 1144 aa15.39■□□□□ 0.05
YBX3-207ENST00000539204 CRKP46108 304 aa15.39■□□□□ 0.05
YBX3-207ENST00000539204 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.39■□□□□ 0.05
YBX3-207ENST00000539204 PAWRQ96IZ0 340 aaKnown RBP15.39■□□□□ 0.05
YBX3-207ENST00000539204 DEFB118Q96PH6 123 aa15.39■□□□□ 0.05
YBX3-207ENST00000539204 IFT57Q9NWB7 429 aa15.39■□□□□ 0.05
YBX3-207ENST00000539204 PLIN1O60240 522 aa15.38■□□□□ 0.05
YBX3-207ENST00000539204 IFIT5Q13325 482 aaKnown RBP15.38■□□□□ 0.05
YBX3-207ENST00000539204 GCKRQ14397 625 aa15.38■□□□□ 0.05
YBX3-207ENST00000539204 NECAB2Q7Z6G3 386 aa15.38■□□□□ 0.05
YBX3-207ENST00000539204 TDRD7Q8NHU6 1098 aaKnown RBP15.38■□□□□ 0.05
YBX3-207ENST00000539204 MYH3P11055 1940 aa15.38■□□□□ 0.05
YBX3-207ENST00000539204 BCAMP50895 628 aa15.37■□□□□ 0.05
YBX3-207ENST00000539204 CALD1Q05682 793 aaKnown RBP15.37■□□□□ 0.05
YBX3-207ENST00000539204 RALBP1Q15311 655 aa15.37■□□□□ 0.05
YBX3-207ENST00000539204 DCAF15Q66K64 600 aa15.37■□□□□ 0.05
YBX3-207ENST00000539204 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.37■□□□□ 0.05
YBX3-207ENST00000539204 PXYLP1Q8TE99 480 aa15.37■□□□□ 0.05
YBX3-207ENST00000539204 GABRQQ9UN88 632 aa15.37■□□□□ 0.05
YBX3-207ENST00000539204 VCANP13611 3396 aa15.36■□□□□ 0.05
YBX3-207ENST00000539204 HIBADHP31937 336 aaKnown RBP15.36■□□□□ 0.05
YBX3-207ENST00000539204 FLT3LGP49771 235 aa15.36■□□□□ 0.05
YBX3-207ENST00000539204 CACNB3P54284 484 aa15.36■□□□□ 0.05
YBX3-207ENST00000539204 CASP7P55210 303 aa15.36■□□□□ 0.05
YBX3-207ENST00000539204 WDR43Q15061 677 aaKnown RBP eCLIP15.36■□□□□ 0.05
YBX3-207ENST00000539204 PARK7Q99497 189 aaKnown RBP15.36■□□□□ 0.05
YBX3-207ENST00000539204 STK31Q9BXU1 1019 aa15.36■□□□□ 0.05
YBX3-207ENST00000539204 ZNF341Q9BYN7 854 aa15.36■□□□□ 0.05
YBX3-207ENST00000539204 CHMP3Q9Y3E7 222 aa15.36■□□□□ 0.05
YBX3-207ENST00000539204 ADGRA2Q96PE1 1338 aa15.36■□□□□ 0.05
YBX3-207ENST00000539204 INHAP05111 366 aa15.35■□□□□ 0.05
YBX3-207ENST00000539204 BCRP11274 1271 aa15.35■□□□□ 0.05
YBX3-207ENST00000539204 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms