RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 GSTM4Q03013 218 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 NAA30Q147X3 362 aaPredicted RBP4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 CAPN12Q6ZSI9 719 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 DYMQ7RTS9 669 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 VN1R5Q7Z5H4 357 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 CILP2Q8IUL8 1156 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 LRRC56Q8IYG6 542 aaPredicted RBP4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 PI4K2BQ8TCG2 481 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 PPP1R12CQ9BZL4 782 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 SEMA6CQ9H3T2 930 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 LMCD1Q9NZU5 365 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 SALL4Q9UJQ4 1053 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 MLANAQ16655 118 aa4.51□□□□□ -1.69
CBX3P4-201ENST00000538909 C1QL4Q86Z23 238 aa4.51□□□□□ -1.69
CBX3P4-201ENST00000538909 PLD6Q8N2A8 252 aaKnown RBP4.51□□□□□ -1.69
CBX3P4-201ENST00000538909 C1orf127Q8N9H9 656 aa4.51□□□□□ -1.69
CBX3P4-201ENST00000538909 FAM181AQ8N9Y4 354 aa4.51□□□□□ -1.69
CBX3P4-201ENST00000538909 ZSCAN18Q8TBC5 510 aaPredicted RBP4.51□□□□□ -1.69
CBX3P4-201ENST00000538909 BSNDQ8WZ55 320 aa4.51□□□□□ -1.69
CBX3P4-201ENST00000538909 DYNC1LI2O43237 492 aaPredicted RBP4.5□□□□□ -1.69
CBX3P4-201ENST00000538909 ZSCAN22P10073 491 aaPredicted RBP4.5□□□□□ -1.69
CBX3P4-201ENST00000538909 ECM1Q16610 540 aa4.5□□□□□ -1.69
CBX3P4-201ENST00000538909 CDCA8Q53HL2 280 aa4.5□□□□□ -1.69
CBX3P4-201ENST00000538909 AKAP4Q5JQC9 854 aa4.5□□□□□ -1.69
CBX3P4-201ENST00000538909 ASAP3Q8TDY4 903 aa4.5□□□□□ -1.69
CBX3P4-201ENST00000538909 NUDT16Q96DE0 195 aaKnown RBP4.5□□□□□ -1.69
CBX3P4-201ENST00000538909 FAM105AQ9NUU6 356 aa4.5□□□□□ -1.69
CBX3P4-201ENST00000538909 DAGLAQ9Y4D2 1042 aa4.5□□□□□ -1.69
CBX3P4-201ENST00000538909 PDE12Q6L8Q7 609 aaKnown RBP4.49□□□□□ -1.69
CBX3P4-201ENST00000538909 TMEM102Q8N9M5 508 aaPredicted RBP4.49□□□□□ -1.69
CBX3P4-201ENST00000538909 NXPE3Q969Y0 559 aa4.49□□□□□ -1.69
CBX3P4-201ENST00000538909 MISP3Q96FF7 219 aa4.49□□□□□ -1.69
CBX3P4-201ENST00000538909 OSMRQ99650 979 aa4.49□□□□□ -1.69
CBX3P4-201ENST00000538909 C1GALT1Q9NS00 363 aa4.49□□□□□ -1.69
CBX3P4-201ENST00000538909 AP4E1Q9UPM8 1137 aa4.49□□□□□ -1.69
CBX3P4-201ENST00000538909 A6NHS1 94 aa4.48□□□□□ -1.69
CBX3P4-201ENST00000538909 ESRRAP11474 423 aaPredicted RBP4.48□□□□□ -1.69
CBX3P4-201ENST00000538909 ASPAP45381 313 aa4.48□□□□□ -1.69
CBX3P4-201ENST00000538909 OGFOD3Q6PK18 319 aa4.48□□□□□ -1.69
CBX3P4-201ENST00000538909 ATCAYQ86WG3 371 aa4.48□□□□□ -1.69
CBX3P4-201ENST00000538909 ZSWIM9Q86XI8 627 aa4.48□□□□□ -1.69
CBX3P4-201ENST00000538909 BHLHE22Q8NFJ8 381 aaPredicted RBP4.48□□□□□ -1.69
CBX3P4-201ENST00000538909 ZKSCAN3Q9BRR0 538 aa4.48□□□□□ -1.69
CBX3P4-201ENST00000538909 ACSS3Q9H6R3 686 aa4.48□□□□□ -1.69
CBX3P4-201ENST00000538909 RAD18Q9NS91 495 aa4.48□□□□□ -1.69
CBX3P4-201ENST00000538909 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 ZNF503-AS2A6NEH8 195 aa4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 CTSBP07858 339 aa4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 RFX1P22670 979 aa4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 KCNMB1Q16558 191 aa4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 OCLNQ16625 522 aa4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 TTLL10Q6ZVT0 673 aa4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 ANKLE2Q86XL3 938 aa4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 NETO1Q8TDF5 533 aa4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 LIN37Q96GY3 246 aaPredicted RBP4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 CALR3Q96L12 384 aaKnown RBP4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 SOX17Q9H6I2 414 aaPredicted RBP4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 PRDM7Q9NQW5 492 aa4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 STIM2Q9P246 746 aa4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 NOVA2Q9UNW9 492 aaKnown RBP4.47□□□□□ -1.69
CBX3P4-201ENST00000538909 TSPAN15O95858 294 aa4.46□□□□□ -1.7
CBX3P4-201ENST00000538909 FAM87AP0C7U9 286 aa4.46□□□□□ -1.7
CBX3P4-201ENST00000538909 MAOBP27338 520 aa4.46□□□□□ -1.7
CBX3P4-201ENST00000538909 CDK5R2Q13319 367 aa4.46□□□□□ -1.7
CBX3P4-201ENST00000538909 CYP27C1Q4G0S4 372 aa4.46□□□□□ -1.7
CBX3P4-201ENST00000538909 SEZ6L2Q6UXD5 910 aa4.46□□□□□ -1.7
CBX3P4-201ENST00000538909 SYDE1Q6ZW31 735 aaPredicted RBP4.46□□□□□ -1.7
CBX3P4-201ENST00000538909 ABTB2Q8N961 1025 aa4.46□□□□□ -1.7
CBX3P4-201ENST00000538909 CRIM1Q9NZV1 1036 aa4.46□□□□□ -1.7
CBX3P4-201ENST00000538909 U3KQE9 123 aa4.46□□□□□ -1.7
CBX3P4-201ENST00000538909 PRKCQQ04759 706 aa4.45□□□□□ -1.7
CBX3P4-201ENST00000538909 AOC3Q16853 763 aa4.45□□□□□ -1.7
CBX3P4-201ENST00000538909 C8orf34Q49A92 452 aa4.45□□□□□ -1.7
CBX3P4-201ENST00000538909 SIAH1Q8IUQ4 282 aa4.45□□□□□ -1.7
CBX3P4-201ENST00000538909 PPP1R16BQ96T49 567 aa4.45□□□□□ -1.7
CBX3P4-201ENST00000538909 NRSN2Q9GZP1 204 aa4.45□□□□□ -1.7
CBX3P4-201ENST00000538909 CHRDQ9H2X0 955 aa4.45□□□□□ -1.7
CBX3P4-201ENST00000538909 FAM53CQ9NYF3 392 aa4.45□□□□□ -1.7
CBX3P4-201ENST00000538909 VAV3Q9UKW4 847 aa4.45□□□□□ -1.7
CBX3P4-201ENST00000538909 JAG2Q9Y219 1238 aa4.45□□□□□ -1.7
CBX3P4-201ENST00000538909 METTL12A8MUP2 240 aa4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 INHBBP09529 407 aa4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 DNM1Q05193 864 aaKnown RBP4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 FLIIQ13045 1269 aa4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 POU4F3Q15319 338 aa4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 ANGEL2Q5VTE6 544 aaKnown RBP4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 ARHGAP27Q6ZUM4 889 aa4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 FLAD1Q8NFF5 587 aa4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 EDEM1Q92611 657 aa4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 CLUAP1Q96AJ1 413 aa4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 HRASLS5Q96KN8 279 aa4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 GGNBP2Q9H3C7 697 aa4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 ACIN1Q9UKV3 1341 aaKnown RBP4.44□□□□□ -1.7
CBX3P4-201ENST00000538909 EREGO14944 169 aa4.43□□□□□ -1.7
CBX3P4-201ENST00000538909 ECEL1O95672 775 aa4.43□□□□□ -1.7
CBX3P4-201ENST00000538909 C1QTNF9P0C862 333 aa4.43□□□□□ -1.7
CBX3P4-201ENST00000538909 CTSWP56202 376 aa4.43□□□□□ -1.7
CBX3P4-201ENST00000538909 SWI5Q1ZZU3 235 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms