RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 WHAMMQ8TF30 809 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 MEIS3Q99687 375 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 PCK1P35558 622 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 STX17P56962 302 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 INTS8Q75QN2 995 aaKnown RBP11.18□□□□□ -0.62
COL4A6-208ENST00000538570 MYRIPQ8NFW9 859 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 LUC7L2Q9Y383 392 aaKnown RBP11.18□□□□□ -0.62
COL4A6-208ENST00000538570 CIB2O75838 187 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 SNX16P57768 344 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 SEL1L2Q5TEA6 688 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 DPH6Q7L8W6 267 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 AFAP1L1Q8TED9 768 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 SCAF11Q99590 1463 aaKnown RBP11.18□□□□□ -0.62
COL4A6-208ENST00000538570 ZNF608Q9ULD9 1512 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-208ENST00000538570 SPDYE3A6NKU9 549 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 CA8P35219 290 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 PEX19P40855 299 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 NMIQ13287 307 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-208ENST00000538570 DIXDC1Q155Q3 683 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 CNGA4Q8IV77 575 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 DDX27Q96GQ7 796 aaKnown RBP11.18□□□□□ -0.62
COL4A6-208ENST00000538570 ERO1AQ96HE7 468 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-208ENST00000538570 ADGRF5Q8IZF2 1346 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 MAGEB6P1A0A0J9YX57 407 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 FOXO3O43524 673 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 GNAT2P19087 354 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 NBPF6Q5VWK0 638 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 BRAPQ7Z569 592 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 NBPF5PQ86XG9 351 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-208ENST00000538570 ANKRD44Q8N8A2 993 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 STMN2Q93045 179 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 NBPF4Q96M43 638 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 CHPF2Q9P2E5 772 aa11.18□□□□□ -0.62
COL4A6-208ENST00000538570 ANKRD36BQ8N2N9 1353 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 IL15P40933 162 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-208ENST00000538570 NCBP1Q09161 790 aaKnown RBP11.17□□□□□ -0.62
COL4A6-208ENST00000538570 SLC9C2Q5TAH2 1124 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 CCDC26Q8TAB7 109 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 WHAMMP3Q1A5X7 153 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 PAG1Q9NWQ8 432 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 NKIRAS1Q9NYS0 192 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 AMOTL2Q9Y2J4 779 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
COL4A6-208ENST00000538570 GMNNO75496 209 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 ATP11AP98196 1134 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 ATP8B2P98198 1209 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 TEX2Q8IWB9 1127 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 MAK16Q9BXY0 300 aaKnown RBP11.17□□□□□ -0.62
COL4A6-208ENST00000538570 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.17□□□□□ -0.62
COL4A6-208ENST00000538570 HDAC9Q9UKV0 1011 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 ALDH1L1O75891 902 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 MCM7P33993 719 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 MRFAP1Q9Y605 127 aa11.17□□□□□ -0.62
COL4A6-208ENST00000538570 DTHD1Q6ZMT9 781 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 MORC4Q8TE76 937 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 DENND4BO75064 1496 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-208ENST00000538570 AKR1B15C9JRZ8 316 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-208ENST00000538570 GRM8O00222 908 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 IFT74Q96LB3 600 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 ANXA1P04083 346 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 PICALMQ13492 652 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 RAB3GAP1Q15042 981 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 CCDC122Q5T0U0 273 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-208ENST00000538570 BAG1Q99933 345 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-208ENST00000538570 RABGAP1Q9Y3P9 1069 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 KRT28Q7Z3Y7 464 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 GPR161Q8N6U8 529 aaKnown RBP11.16□□□□□ -0.62
COL4A6-208ENST00000538570 RALGAPBQ86X10 1494 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 TTC41PQ6P2S7 1318 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 PFDN1O60925 122 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 DMTNQ08495 405 aa11.16□□□□□ -0.62
COL4A6-208ENST00000538570 FANCAO15360 1455 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 AK2P54819 239 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 PPP2R3AQ06190 1150 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 B4DLN1 442 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 TNNI2P48788 182 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 MRPL12P52815 198 aaKnown RBP11.15□□□□□ -0.62
COL4A6-208ENST00000538570 FAM160A1Q05DH4 1040 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 SH2D4BQ5SQS7 431 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 IQUBQ8NA54 791 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 XAGE3Q8WTP9 111 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 PPP1R12CQ9BZL4 782 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 GAS8O95995 478 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 VIMP08670 466 aaKnown RBP11.15□□□□□ -0.62
COL4A6-208ENST00000538570 RPL13P26373 211 aaKnown RBP11.15□□□□□ -0.62
COL4A6-208ENST00000538570 GNA11P29992 359 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 APOBRQ0VD83 1088 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 RAPGEF1Q13905 1077 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 INF2Q27J81 1249 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 CSRNP2Q9H175 543 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 SBNO2Q9Y2G9 1366 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 NPHP3Q7Z494 1330 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 PTPDC1A2A3K4 754 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 RNF113AO15541 343 aaKnown RBP11.15□□□□□ -0.62
COL4A6-208ENST00000538570 ZNF804AQ7Z570 1209 aa11.15□□□□□ -0.62
COL4A6-208ENST00000538570 EVCP57679 992 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms