RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 RPRD2Q5VT52 1461 aaKnown RBP12.68□□□□□ -0.38
LINC00346-201ENST00000538077 DENND2AQ9ULE3 1009 aa12.67□□□□□ -0.38
LINC00346-201ENST00000538077 CEP85Q6P2H3 762 aa12.67□□□□□ -0.38
LINC00346-201ENST00000538077 YTHDC2Q9H6S0 1430 aaKnown RBP12.67□□□□□ -0.38
LINC00346-201ENST00000538077 TRIM75PA6NK02 468 aa12.67□□□□□ -0.38
LINC00346-201ENST00000538077 B4DLN1 442 aa12.67□□□□□ -0.38
LINC00346-201ENST00000538077 MRPL12P52815 198 aaKnown RBP12.67□□□□□ -0.38
LINC00346-201ENST00000538077 G2E3Q7L622 706 aa12.67□□□□□ -0.38
LINC00346-201ENST00000538077 ANKRD44Q8N8A2 993 aa12.67□□□□□ -0.38
LINC00346-201ENST00000538077 PRDM1O75626 825 aa12.67□□□□□ -0.38
LINC00346-201ENST00000538077 CCDC175P0C221 793 aa12.67□□□□□ -0.38
LINC00346-201ENST00000538077 A1BGP04217 495 aa12.67□□□□□ -0.38
LINC00346-201ENST00000538077 CCDC114Q96M63 670 aa12.67□□□□□ -0.38
LINC00346-201ENST00000538077 CCDC171Q6TFL3 1326 aa12.67□□□□□ -0.38
LINC00346-201ENST00000538077 PSMA7O14818 248 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 ERCC3P19447 782 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 RNF34Q969K3 372 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 LRRC45Q96CN5 670 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 TTC12Q9H892 705 aaPredicted RBP12.66□□□□□ -0.38
LINC00346-201ENST00000538077 DACT1Q9NYF0 836 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 TRAPPC8Q9Y2L5 1435 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 KARSQ15046 597 aaKnown RBP12.66□□□□□ -0.38
LINC00346-201ENST00000538077 MAP3K1Q13233 1512 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 MXRA7P84157 204 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 DTHD1Q6ZMT9 781 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 CPXCR1Q8N123 301 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 CGNQ9P2M7 1197 aaKnown RBP12.66□□□□□ -0.38
LINC00346-201ENST00000538077 ZNF518AQ6AHZ1 1483 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 SPTLC2O15270 562 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 F13A1P00488 732 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 CCT6AP40227 531 aaKnown RBP12.66□□□□□ -0.38
LINC00346-201ENST00000538077 PIK3AP1Q6ZUJ8 805 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 LGR6Q9HBX8 967 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 NUP153P49790 1475 aaKnown RBP12.66□□□□□ -0.38
LINC00346-201ENST00000538077 BIRC3Q13489 604 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 RASA3Q14644 834 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 NCAPH2Q6IBW4 605 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 A0A1W2PP64 1363 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 ZMYM3Q14202 1370 aa12.66□□□□□ -0.38
LINC00346-201ENST00000538077 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
LINC00346-201ENST00000538077 EP400NLQ6ZTU2 488 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 GIMAP7Q8NHV1 300 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 CTAGE1Q96RT6 745 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 GPHNQ9NQX3 736 aaPredicted RBP12.65□□□□□ -0.38
LINC00346-201ENST00000538077 A0A1B0GUL7 405 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 RUFY3Q7L099 469 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 XAGE2Q96GT9 111 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 TBC1D7Q9P0N9 293 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 CEP112Q8N8E3 955 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 IQCGQ9H095 443 aaKnown RBP12.65□□□□□ -0.38
LINC00346-201ENST00000538077 NOP56O00567 594 aaKnown RBP12.65□□□□□ -0.38
LINC00346-201ENST00000538077 NDC80O14777 642 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 GTF2F1P35269 517 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC00346-201ENST00000538077 CYLC1P35663 651 aaPredicted RBP12.65□□□□□ -0.38
LINC00346-201ENST00000538077 TRAF1Q13077 416 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 NEK11Q8NG66 645 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 TBC1D32Q96NH3 1257 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 SELENOSQ9BQE4 189 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 MAK16Q9BXY0 300 aaKnown RBP12.65□□□□□ -0.38
LINC00346-201ENST00000538077 ATP10BO94823 1461 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 MYL10Q9BUA6 226 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 BCS1LQ9Y276 419 aa12.65□□□□□ -0.38
LINC00346-201ENST00000538077 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.64□□□□□ -0.39
LINC00346-201ENST00000538077 IP6K1Q92551 441 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 SELENOOQ9BVL4 669 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 SYT1P21579 422 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 GPR162Q16538 588 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 CCDC25Q86WR0 208 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 HDAC1Q13547 482 aaPredicted RBP12.64□□□□□ -0.39
LINC00346-201ENST00000538077 MAPKAPK5Q8IW41 473 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 LINS1Q8NG48 757 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 RAD51AP2Q09MP3 1159 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 TGFBRAP1Q8WUH2 860 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 MRRFQ96E11 262 aaKnown RBP12.64□□□□□ -0.39
LINC00346-201ENST00000538077 RBM28Q9NW13 759 aaKnown RBP12.64□□□□□ -0.39
LINC00346-201ENST00000538077 RASAL2Q9UJF2 1139 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 MAPK8IP1Q9UQF2 711 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 hCG_1642624A0A1W2PR95 340 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 PUM3Q15397 648 aaKnown RBP12.64□□□□□ -0.39
LINC00346-201ENST00000538077 CCDC155Q8N6L0 562 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 KIFC2Q96AC6 838 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 GUCA1BQ9UMX6 200 aa12.64□□□□□ -0.39
LINC00346-201ENST00000538077 TTC6Q86TZ1 520 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 CSPG5O95196 566 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 CCDC65Q8IXS2 484 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 BMP15O95972 392 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 CALML3P27482 149 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 GNA11P29992 359 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 BEGAINQ9BUH8 593 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 DNAI1Q9UI46 699 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 FNBP1Q96RU3 617 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 TXKP42681 527 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 CKAP4Q07065 602 aaKnown RBP12.63□□□□□ -0.39
LINC00346-201ENST00000538077 TRIM6Q9C030 488 aaPredicted RBP12.63□□□□□ -0.39
LINC00346-201ENST00000538077 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC00346-201ENST00000538077 FRMD4BQ9Y2L6 1034 aa12.63□□□□□ -0.39
LINC00346-201ENST00000538077 V9GYY5 206 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms