RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SMIM22K7EJ46 135 aa10.16□□□□□ -0.78
UBE3B-208ENST00000538070 ZSCAN25Q6NSZ9 544 aa10.16□□□□□ -0.78
UBE3B-208ENST00000538070 AFDNP55196 1824 aaKnown RBP10.16□□□□□ -0.78
UBE3B-208ENST00000538070 CCDC69A6NI79 296 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 GOLGA8AA7E2F4 631 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 CSF1RP07333 972 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 FDPSP14324 419 aaKnown RBP10.15□□□□□ -0.78
UBE3B-208ENST00000538070 CYP7A1P22680 504 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 PUM3Q15397 648 aaKnown RBP10.15□□□□□ -0.78
UBE3B-208ENST00000538070 NGLY1Q96IV0 654 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 CLSTN2Q9H4D0 955 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 STRCP1A6NGW2 1772 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 SCN11AQ9UI33 1791 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 DHX16O60231 1041 aaKnown RBP10.15□□□□□ -0.78
UBE3B-208ENST00000538070 ADD2P35612 726 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 ANTXR2P58335 489 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 TRIM29Q14134 588 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 PYCARDQ9ULZ3 195 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 CYP2D7A0A087X1C5 515 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 ITPK1Q13572 414 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 NOLC1Q14978 699 aaKnown RBP eCLIP10.15□□□□□ -0.78
UBE3B-208ENST00000538070 PTPN21Q16825 1174 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 CPLX2Q6PUV4 134 aaKnown RBP10.15□□□□□ -0.78
UBE3B-208ENST00000538070 C11orf57Q6ZUT1 292 aaPredicted RBP10.15□□□□□ -0.78
UBE3B-208ENST00000538070 PTF1AQ7RTS3 328 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 TFCP2L1Q9NZI6 479 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 DCCP43146 1447 aa10.15□□□□□ -0.78
UBE3B-208ENST00000538070 CARMIL3Q8ND23 1372 aa10.15□□□□□ -0.79
UBE3B-208ENST00000538070 ALS2Q96Q42 1657 aa10.15□□□□□ -0.79
UBE3B-208ENST00000538070 FOXP2O15409 715 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 UVSSAQ2YD98 709 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 MARCH10Q8NA82 808 aaPredicted RBP10.14□□□□□ -0.79
UBE3B-208ENST00000538070 LPIN2Q92539 896 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 PCDHA7Q9UN72 937 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 PALLDQ8WX93 1383 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 GOLGA6L6A8MZA4 724 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 CCDC152Q4G0S7 254 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 KCNJ14Q9UNX9 436 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 SLC12A7Q9Y666 1083 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 ZBTB43O43298 467 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 RANBP6O60518 1105 aaKnown RBP10.14□□□□□ -0.79
UBE3B-208ENST00000538070 TTF1Q15361 905 aaPredicted RBP10.14□□□□□ -0.79
UBE3B-208ENST00000538070 LCORLQ8N3X6 602 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 AOPEPQ8N6M6 819 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 PDILTQ8N807 584 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 CERKQ8TCT0 537 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 CLIP2Q9UDT6 1046 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 NEDD4P46934 1319 aa10.14□□□□□ -0.79
UBE3B-208ENST00000538070 KIF28PB7ZC32 967 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 IARSP41252 1262 aaKnown RBP10.13□□□□□ -0.79
UBE3B-208ENST00000538070 NDUFA8P51970 172 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 CHRNDQ07001 517 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 TRIM28Q13263 835 aaKnown RBP10.13□□□□□ -0.79
UBE3B-208ENST00000538070 MFSD6Q6ZSS7 791 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 VSIG10Q8N0Z9 540 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 SMARCC2Q8TAQ2 1214 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 ZNF274Q96GC6 653 aaPredicted RBP10.13□□□□□ -0.79
UBE3B-208ENST00000538070 ANGEL1Q9UNK9 670 aaKnown RBP10.13□□□□□ -0.79
UBE3B-208ENST00000538070 SMC2O95347 1197 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 CDC27P30260 824 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 IL6STP40189 918 aaPredicted RBP10.13□□□□□ -0.79
UBE3B-208ENST00000538070 ARID5BQ14865 1188 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 ERFEQ4G0M1 354 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 IFNL3Q8IZI9 196 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 C16orf45Q96MC5 204 aaPredicted RBP10.13□□□□□ -0.79
UBE3B-208ENST00000538070 CLIC6Q96NY7 704 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 LLPHQ9BRT6 129 aaKnown RBP10.13□□□□□ -0.79
UBE3B-208ENST00000538070 SRP68Q9UHB9 627 aaKnown RBP10.13□□□□□ -0.79
UBE3B-208ENST00000538070 USP54Q70EL1 1684 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 ERICH2A1L162 156 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 SPTLC2O15270 562 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 UQCRFS1P1P0C7P4 283 aa10.13□□□□□ -0.79
UBE3B-208ENST00000538070 MB21D2Q8IYB1 491 aaPredicted RBP10.13□□□□□ -0.79
UBE3B-208ENST00000538070 HS1BP3Q53T59 392 aa10.12□□□□□ -0.79
UBE3B-208ENST00000538070 CREBRFQ8IUR6 639 aa10.12□□□□□ -0.79
UBE3B-208ENST00000538070 FUCA2Q9BTY2 467 aa10.12□□□□□ -0.79
UBE3B-208ENST00000538070 TRMT1Q9NXH9 659 aaKnown RBP10.12□□□□□ -0.79
UBE3B-208ENST00000538070 ZSWIM5Q9P217 1185 aa10.12□□□□□ -0.79
UBE3B-208ENST00000538070 DYNLL1P63167 89 aaKnown RBP10.12□□□□□ -0.79
UBE3B-208ENST00000538070 NAA16Q6N069 864 aaPredicted RBP10.12□□□□□ -0.79
UBE3B-208ENST00000538070 C3orf67Q6ZVT6 689 aa10.12□□□□□ -0.79
UBE3B-208ENST00000538070 MRPS27Q92552 414 aaKnown RBP10.12□□□□□ -0.79
UBE3B-208ENST00000538070 HPS5Q9UPZ3 1129 aa10.12□□□□□ -0.79
UBE3B-208ENST00000538070 TUBGCP6Q96RT7 1819 aa10.12□□□□□ -0.79
UBE3B-208ENST00000538070 INTS5Q6P9B9 1019 aaKnown RBP10.12□□□□□ -0.79
UBE3B-208ENST00000538070 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
UBE3B-208ENST00000538070 STRBPQ96SI9 672 aaKnown RBP10.12□□□□□ -0.79
UBE3B-208ENST00000538070 UBAC1Q9BSL1 405 aa10.12□□□□□ -0.79
UBE3B-208ENST00000538070 NACAP1Q9BZK3 213 aa10.12□□□□□ -0.79
UBE3B-208ENST00000538070 ELP1O95163 1332 aa10.12□□□□□ -0.79
UBE3B-208ENST00000538070 PHRF1Q9P1Y6 1649 aaKnown RBP10.12□□□□□ -0.79
UBE3B-208ENST00000538070 KRT40Q6A162 431 aa10.11□□□□□ -0.79
UBE3B-208ENST00000538070 ANKRD18AQ8IVF6 992 aa10.11□□□□□ -0.79
UBE3B-208ENST00000538070 FBXO18Q8NFZ0 1043 aa10.11□□□□□ -0.79
UBE3B-208ENST00000538070 ALDH8A1Q9H2A2 487 aaPredicted RBP10.11□□□□□ -0.79
UBE3B-208ENST00000538070 ZNF500O60304 480 aaPredicted RBP10.11□□□□□ -0.79
UBE3B-208ENST00000538070 MYSM1Q5VVJ2 828 aa10.11□□□□□ -0.79
UBE3B-208ENST00000538070 APOA5Q6Q788 366 aa10.11□□□□□ -0.79
UBE3B-208ENST00000538070 NBPF3Q9H094 633 aa10.11□□□□□ -0.79
UBE3B-208ENST00000538070 EIF5P55010 431 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms