RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 PPP4R2Q9NY27 417 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 COL4A5P29400 1685 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 A0A1B0GUL7 405 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 IQCA1LA6NCM1 817 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 USP17L3A6NCW0 530 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 USP17L4A6NCW7 530 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 GLTPD2A6NH11 291 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 C6orf229H3BNL8 230 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 ECE2O60344 883 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 ZNF280AP59817 542 aaPredicted RBP8.04□□□□□ -1.12
IFT88-207ENST00000537103 TFCP2Q12800 502 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 AMHR2Q16671 573 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 C9orf131Q5VYM1 1079 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 CIAPIN1Q6FI81 312 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 USP17L1Q7RTZ2 530 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 OS9Q13438 667 aaPredicted RBP8.04□□□□□ -1.12
IFT88-207ENST00000537103 TTLL12Q14166 644 aaPredicted RBP8.04□□□□□ -1.12
IFT88-207ENST00000537103 RSBN1LQ6PCB5 846 aaPredicted RBP8.04□□□□□ -1.12
IFT88-207ENST00000537103 FAM163AQ96GL9 167 aaPredicted RBP8.04□□□□□ -1.12
IFT88-207ENST00000537103 IGSF5Q9NSI5 407 aa8.04□□□□□ -1.12
IFT88-207ENST00000537103 PITPNM2Q9BZ72 1349 aa8.03□□□□□ -1.12
IFT88-207ENST00000537103 ERC2O15083 957 aa8.03□□□□□ -1.12
IFT88-207ENST00000537103 NT5C2P49902 561 aa8.03□□□□□ -1.12
IFT88-207ENST00000537103 XAGE2Q96GT9 111 aa8.03□□□□□ -1.12
IFT88-207ENST00000537103 GMLQ99445 158 aa8.03□□□□□ -1.12
IFT88-207ENST00000537103 SMARCA5O60264 1052 aaPredicted RBP8.03□□□□□ -1.12
IFT88-207ENST00000537103 GSTO1P78417 241 aa8.03□□□□□ -1.12
IFT88-207ENST00000537103 DACT2Q5SW24 774 aa8.03□□□□□ -1.12
IFT88-207ENST00000537103 USP50Q70EL3 339 aaPredicted RBP8.03□□□□□ -1.12
IFT88-207ENST00000537103 RNF181Q9P0P0 153 aa8.03□□□□□ -1.12
IFT88-207ENST00000537103 PGAP2Q9UHJ9 254 aa8.03□□□□□ -1.12
IFT88-207ENST00000537103 PA2G4Q9UQ80 394 aaKnown RBP8.03□□□□□ -1.12
IFT88-207ENST00000537103 IVNS1ABPQ9Y6Y0 642 aa8.03□□□□□ -1.12
IFT88-207ENST00000537103 RPAP1Q9BWH6 1393 aaPredicted RBP8.03□□□□□ -1.12
IFT88-207ENST00000537103 CCDC88AQ3V6T2 1871 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 BRD1O95696 1058 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 RASSF7Q02833 373 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 FKBP1CQ5VVH2 108 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 CCDC102BQ68D86 513 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 HDAC9Q9UKV0 1011 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 CLEC11AQ9Y240 323 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 PPP2R3BQ9Y5P8 575 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 GLRX3O76003 335 aaKnown RBP8.02□□□□□ -1.13
IFT88-207ENST00000537103 IFIT2P09913 472 aaKnown RBP8.02□□□□□ -1.13
IFT88-207ENST00000537103 PRELPP51888 382 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 AOC3Q16853 763 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 ZSCAN25Q6NSZ9 544 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 HHIPL2Q6UWX4 724 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 PNMA8AQ86V59 439 aaPredicted RBP8.02□□□□□ -1.13
IFT88-207ENST00000537103 ZBED3Q96IU2 234 aaPredicted RBP8.02□□□□□ -1.13
IFT88-207ENST00000537103 ZNF277Q9NRM2 450 aaPredicted RBP8.02□□□□□ -1.13
IFT88-207ENST00000537103 ECHDC1Q9NTX5 307 aa8.02□□□□□ -1.13
IFT88-207ENST00000537103 G3V3G9 751 aa8.01□□□□□ -1.13
IFT88-207ENST00000537103 IRF6O14896 467 aa8.01□□□□□ -1.13
IFT88-207ENST00000537103 KCNA1Q09470 495 aa8.01□□□□□ -1.13
IFT88-207ENST00000537103 CHD1LQ86WJ1 897 aa8.01□□□□□ -1.13
IFT88-207ENST00000537103 EAF2Q96CJ1 260 aaPredicted RBP8.01□□□□□ -1.13
IFT88-207ENST00000537103 CCDC85AQ96PX6 553 aaPredicted RBP8.01□□□□□ -1.13
IFT88-207ENST00000537103 HAUS7Q99871 368 aa8.01□□□□□ -1.13
IFT88-207ENST00000537103 AKAP11Q9UKA4 1901 aa8.01□□□□□ -1.13
IFT88-207ENST00000537103 LDHCP07864 332 aa8.01□□□□□ -1.13
IFT88-207ENST00000537103 ZFYP08048 801 aaPredicted RBP8.01□□□□□ -1.13
IFT88-207ENST00000537103 TTC39AQ5SRH9 613 aa8.01□□□□□ -1.13
IFT88-207ENST00000537103 VPS37DQ86XT2 251 aa8.01□□□□□ -1.13
IFT88-207ENST00000537103 ADARB2Q9NS39 739 aaKnown RBP8.01□□□□□ -1.13
IFT88-207ENST00000537103 DBNLQ9UJU6 430 aaKnown RBP8.01□□□□□ -1.13
IFT88-207ENST00000537103 GAKO14976 1311 aa8□□□□□ -1.13
IFT88-207ENST00000537103 YDJCA8MPS7 323 aa8□□□□□ -1.13
IFT88-207ENST00000537103 CXCL9Q07325 125 aa8□□□□□ -1.13
IFT88-207ENST00000537103 AACSQ86V21 672 aa8□□□□□ -1.13
IFT88-207ENST00000537103 KLHDC4Q8TBB5 520 aa8□□□□□ -1.13
IFT88-207ENST00000537103 EXOC6BQ9Y2D4 811 aa8□□□□□ -1.13
IFT88-207ENST00000537103 HIP1O00291 1037 aa8□□□□□ -1.13
IFT88-207ENST00000537103 TAF5LO75529 589 aa8□□□□□ -1.13
IFT88-207ENST00000537103 LMOD1P29536 600 aaPredicted RBP8□□□□□ -1.13
IFT88-207ENST00000537103 SPATA5Q8NB90 893 aa8□□□□□ -1.13
IFT88-207ENST00000537103 SIL1Q9H173 461 aa8□□□□□ -1.13
IFT88-207ENST00000537103 EPB41L2O43491 1005 aaKnown RBP7.99□□□□□ -1.13
IFT88-207ENST00000537103 PLCG2P16885 1265 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 GORABQ5T7V8 394 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 GPRC5DQ9NZD1 345 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 HACL1Q9UJ83 578 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 FOCADQ5VW36 1801 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 MX1P20591 662 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 PPP4CP60510 307 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 FSTL1Q12841 308 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 TTLL5Q6EMB2 1281 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 RBM46Q8TBY0 533 aaKnown RBP7.99□□□□□ -1.13
IFT88-207ENST00000537103 HOOK2Q96ED9 719 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 DDX27Q96GQ7 796 aaKnown RBP7.99□□□□□ -1.13
IFT88-207ENST00000537103 ZDHHC15Q96MV8 337 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 ZNF541Q9H0D2 1346 aa7.99□□□□□ -1.13
IFT88-207ENST00000537103 H7C1D1 291 aa7.98□□□□□ -1.13
IFT88-207ENST00000537103 PSMD14O00487 310 aa7.98□□□□□ -1.13
IFT88-207ENST00000537103 FECHP22830 423 aa7.98□□□□□ -1.13
IFT88-207ENST00000537103 UBE3CQ15386 1083 aa7.98□□□□□ -1.13
IFT88-207ENST00000537103 SND1Q7KZF4 910 aaKnown RBP eCLIP7.98□□□□□ -1.13
IFT88-207ENST00000537103 SPDYE1Q8NFV5 336 aaPredicted RBP7.98□□□□□ -1.13
IFT88-207ENST00000537103 DBNDD2Q9BQY9 259 aa7.98□□□□□ -1.13
IFT88-207ENST00000537103 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms