RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TDRD7Q8NHU6 1098 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-207ENST00000535958 CRKP46108 304 aa16.33■□□□□ 0.2
TNFRSF1A-207ENST00000535958 METTL24Q5JXM2 366 aa16.33■□□□□ 0.2
TNFRSF1A-207ENST00000535958 TBC1D22AQ8WUA7 517 aa16.33■□□□□ 0.2
TNFRSF1A-207ENST00000535958 SUCLG2Q96I99 432 aa16.33■□□□□ 0.2
TNFRSF1A-207ENST00000535958 PTPN22Q9Y2R2 807 aa16.33■□□□□ 0.2
TNFRSF1A-207ENST00000535958 AOX1Q06278 1338 aa16.33■□□□□ 0.2
TNFRSF1A-207ENST00000535958 CCL15-CCL14A0A0B4J2E2 113 aa16.32■□□□□ 0.2
TNFRSF1A-207ENST00000535958 GJA5P36382 358 aa16.32■□□□□ 0.2
TNFRSF1A-207ENST00000535958 GTF2A2P52657 109 aa16.32■□□□□ 0.2
TNFRSF1A-207ENST00000535958 TAF1CQ15572 869 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-207ENST00000535958 CCL15Q16663 113 aa16.32■□□□□ 0.2
TNFRSF1A-207ENST00000535958 HOOK2Q96ED9 719 aa16.32■□□□□ 0.2
TNFRSF1A-207ENST00000535958 FAM84BQ96KN1 310 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-207ENST00000535958 TMEM39BQ9GZU3 492 aa16.32■□□□□ 0.2
TNFRSF1A-207ENST00000535958 ZFYVE28Q9HCC9 887 aa16.32■□□□□ 0.2
TNFRSF1A-207ENST00000535958 MAST3O60307 1309 aa16.31■□□□□ 0.2
TNFRSF1A-207ENST00000535958 TESPA1A2RU30 521 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-207ENST00000535958 MAP3K9P80192 1104 aa16.31■□□□□ 0.2
TNFRSF1A-207ENST00000535958 TEKT1Q969V4 418 aa16.31■□□□□ 0.2
TNFRSF1A-207ENST00000535958 OTUD5Q96G74 571 aa16.31■□□□□ 0.2
TNFRSF1A-207ENST00000535958 TMEM106CQ9BVX2 250 aa16.31■□□□□ 0.2
TNFRSF1A-207ENST00000535958 PUS3Q9BZE2 481 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-207ENST00000535958 IQSEC3Q9UPP2 1182 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-207ENST00000535958 VGLL4Q14135 290 aa16.3■□□□□ 0.2
TNFRSF1A-207ENST00000535958 NBPF11Q86T75 865 aa16.3■□□□□ 0.2
TNFRSF1A-207ENST00000535958 FAM9BQ8IZU0 186 aa16.3■□□□□ 0.2
TNFRSF1A-207ENST00000535958 BICC1Q9H694 974 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-207ENST00000535958 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
TNFRSF1A-207ENST00000535958 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-207ENST00000535958 HDLBPQ00341 1268 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-207ENST00000535958 KIF22Q14807 665 aa16.29■□□□□ 0.2
TNFRSF1A-207ENST00000535958 SLC9C1Q4G0N8 1177 aa16.29■□□□□ 0.2
TNFRSF1A-207ENST00000535958 PTPN18Q99952 460 aa16.29■□□□□ 0.2
TNFRSF1A-207ENST00000535958 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-207ENST00000535958 RBBP6Q7Z6E9 1792 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1A-207ENST00000535958 NBPF7P0C2Y1 421 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-207ENST00000535958 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-207ENST00000535958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.28■□□□□ 0.2
TNFRSF1A-207ENST00000535958 BRI3BPQ8WY22 251 aa16.28■□□□□ 0.2
TNFRSF1A-207ENST00000535958 ARMC5Q96C12 935 aa16.28■□□□□ 0.2
TNFRSF1A-207ENST00000535958 TEPSINQ96N21 525 aa16.28■□□□□ 0.2
TNFRSF1A-207ENST00000535958 WRNIP1Q96S55 665 aa16.28■□□□□ 0.2
TNFRSF1A-207ENST00000535958 RIPOR2Q9Y4F9 1068 aa16.28■□□□□ 0.2
TNFRSF1A-207ENST00000535958 IFIT1P09914 478 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1A-207ENST00000535958 CETPP11597 493 aa16.27■□□□□ 0.2
TNFRSF1A-207ENST00000535958 CACNB3P54284 484 aa16.27■□□□□ 0.2
TNFRSF1A-207ENST00000535958 DCAF15Q66K64 600 aa16.27■□□□□ 0.2
TNFRSF1A-207ENST00000535958 FBXO33Q7Z6M2 555 aa16.27■□□□□ 0.2
TNFRSF1A-207ENST00000535958 CDAN1Q8IWY9 1227 aa16.27■□□□□ 0.2
TNFRSF1A-207ENST00000535958 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
TNFRSF1A-207ENST00000535958 MS4A4AQ96JQ5 239 aa16.27■□□□□ 0.2
TNFRSF1A-207ENST00000535958 UTYO14607 1347 aa16.26■□□□□ 0.19
TNFRSF1A-207ENST00000535958 SPDYE5A6NIY4 337 aa16.26■□□□□ 0.19
TNFRSF1A-207ENST00000535958 PDE8BO95263 885 aa16.26■□□□□ 0.19
TNFRSF1A-207ENST00000535958 SNAPC2Q13487 334 aa16.26■□□□□ 0.19
TNFRSF1A-207ENST00000535958 PUM3Q15397 648 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-207ENST00000535958 SLC4A8Q2Y0W8 1093 aa16.26■□□□□ 0.19
TNFRSF1A-207ENST00000535958 LRRC24Q50LG9 513 aa16.26■□□□□ 0.19
TNFRSF1A-207ENST00000535958 ERO1BQ86YB8 467 aa16.26■□□□□ 0.19
TNFRSF1A-207ENST00000535958 PTPRCP08575 1304 aa16.25■□□□□ 0.19
TNFRSF1A-207ENST00000535958 RABL6Q3YEC7 729 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1A-207ENST00000535958 FAM83AQ86UY5 434 aa16.25■□□□□ 0.19
TNFRSF1A-207ENST00000535958 FAM43AQ8N2R8 423 aa16.25■□□□□ 0.19
TNFRSF1A-207ENST00000535958 KAZALD1Q96I82 304 aa16.25■□□□□ 0.19
TNFRSF1A-207ENST00000535958 ZDHHC15Q96MV8 337 aa16.25■□□□□ 0.19
TNFRSF1A-207ENST00000535958 SUGT1Q9Y2Z0 365 aa16.25■□□□□ 0.19
TNFRSF1A-207ENST00000535958 PTCH2Q9Y6C5 1203 aa16.25■□□□□ 0.19
TNFRSF1A-207ENST00000535958 MYH13Q9UKX3 1938 aa16.24■□□□□ 0.19
TNFRSF1A-207ENST00000535958 SLC5A1P13866 664 aa16.24■□□□□ 0.19
TNFRSF1A-207ENST00000535958 BCAMP50895 628 aa16.24■□□□□ 0.19
TNFRSF1A-207ENST00000535958 GRIK5Q16478 980 aa16.24■□□□□ 0.19
TNFRSF1A-207ENST00000535958 ZNF333Q96JL9 665 aa16.24■□□□□ 0.19
TNFRSF1A-207ENST00000535958 RPAP1Q9BWH6 1393 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-207ENST00000535958 KIF16BQ96L93 1317 aa16.23■□□□□ 0.19
TNFRSF1A-207ENST00000535958 HTTP42858 3142 aa16.23■□□□□ 0.19
TNFRSF1A-207ENST00000535958 EN2P19622 333 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-207ENST00000535958 FKBP1CQ5VVH2 108 aa16.23■□□□□ 0.19
TNFRSF1A-207ENST00000535958 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
TNFRSF1A-207ENST00000535958 WDR66Q8TBY9 1149 aa16.23■□□□□ 0.19
TNFRSF1A-207ENST00000535958 ZNF341Q9BYN7 854 aa16.23■□□□□ 0.19
TNFRSF1A-207ENST00000535958 ZCCHC17Q9NP64 241 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-207ENST00000535958 SNCAIPQ9Y6H5 919 aa16.23■□□□□ 0.19
TNFRSF1A-207ENST00000535958 KIAA0100Q14667 2235 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-207ENST00000535958 TLR2O60603 784 aa16.22■□□□□ 0.19
TNFRSF1A-207ENST00000535958 MYCP01106 439 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1A-207ENST00000535958 PPIL2Q13356 520 aa16.22■□□□□ 0.19
TNFRSF1A-207ENST00000535958 MRPL50Q8N5N7 158 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-207ENST00000535958 VGLL2Q8N8G2 317 aa16.22■□□□□ 0.19
TNFRSF1A-207ENST00000535958 KLHDC4Q8TBB5 520 aa16.22■□□□□ 0.19
TNFRSF1A-207ENST00000535958 ZKSCAN4Q969J2 545 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1A-207ENST00000535958 MRIQ9BWK5 157 aa16.22■□□□□ 0.19
TNFRSF1A-207ENST00000535958 IRF6O14896 467 aa16.21■□□□□ 0.19
TNFRSF1A-207ENST00000535958 GNRH1P01148 92 aa16.21■□□□□ 0.19
TNFRSF1A-207ENST00000535958 HABP4Q5JVS0 413 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-207ENST00000535958 HHIPL2Q6UWX4 724 aa16.21■□□□□ 0.19
TNFRSF1A-207ENST00000535958 LPIN2Q92539 896 aa16.21■□□□□ 0.19
TNFRSF1A-207ENST00000535958 GNL3LQ9NVN8 582 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-207ENST00000535958 CENPFP49454 3210 aa16.2■□□□□ 0.18
TNFRSF1A-207ENST00000535958 BTBD19C9JJ37 291 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms