RNA–Protein interactions for RNA: ENST00000535120.1

MRE11-205, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2

Gene MRE11, Length 234 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-205ENST00000535120 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.18□□□□□ -0.94
MRE11-205ENST00000535120 DZIP1LQ8IYY4 767 aaKnown RBP9.18□□□□□ -0.94
MRE11-205ENST00000535120 FAM43AQ8N2R8 423 aa9.18□□□□□ -0.94
MRE11-205ENST00000535120 ZNF333Q96JL9 665 aa9.18□□□□□ -0.94
MRE11-205ENST00000535120 ARHGAP39Q9C0H5 1083 aa9.18□□□□□ -0.94
MRE11-205ENST00000535120 C9orf78Q9NZ63 289 aaPredicted RBP9.18□□□□□ -0.94
MRE11-205ENST00000535120 IRS2Q9Y4H2 1338 aa9.17□□□□□ -0.94
MRE11-205ENST00000535120 H0YGN5 161 aa9.17□□□□□ -0.94
MRE11-205ENST00000535120 TNNI2P48788 182 aa9.17□□□□□ -0.94
MRE11-205ENST00000535120 FXR1P51114 621 aaKnown RBP eCLIP9.17□□□□□ -0.94
MRE11-205ENST00000535120 FKBP1AP62942 108 aaKnown RBP9.17□□□□□ -0.94
MRE11-205ENST00000535120 CCDC184Q52MB2 194 aa9.17□□□□□ -0.94
MRE11-205ENST00000535120 C15orf52Q6ZUT6 534 aaKnown RBP9.17□□□□□ -0.94
MRE11-205ENST00000535120 DPF3Q92784 378 aa9.17□□□□□ -0.94
MRE11-205ENST00000535120 ZKSCAN4Q969J2 545 aaPredicted RBP9.17□□□□□ -0.94
MRE11-205ENST00000535120 MS4A4AQ96JQ5 239 aa9.17□□□□□ -0.94
MRE11-205ENST00000535120 FANCIQ9NVI1 1328 aa9.16□□□□□ -0.94
MRE11-205ENST00000535120 TESPA1A2RU30 521 aaPredicted RBP9.16□□□□□ -0.94
MRE11-205ENST00000535120 UNCXA6NJT0 531 aa9.16□□□□□ -0.94
MRE11-205ENST00000535120 EXOSC9Q06265 439 aaKnown RBP9.16□□□□□ -0.94
MRE11-205ENST00000535120 GRIK5Q16478 980 aa9.16□□□□□ -0.94
MRE11-205ENST00000535120 BEND3Q5T5X7 828 aa9.16□□□□□ -0.94
MRE11-205ENST00000535120 TDRD7Q8NHU6 1098 aaKnown RBP9.16□□□□□ -0.94
MRE11-205ENST00000535120 FAM84BQ96KN1 310 aaPredicted RBP9.16□□□□□ -0.94
MRE11-205ENST00000535120 WRNIP1Q96S55 665 aa9.16□□□□□ -0.94
MRE11-205ENST00000535120 PUS3Q9BZE2 481 aaKnown RBP9.16□□□□□ -0.94
MRE11-205ENST00000535120 BIN2Q9UBW5 565 aaPredicted RBP9.16□□□□□ -0.94
MRE11-205ENST00000535120 SERPINA10Q9UK55 444 aa9.16□□□□□ -0.94
MRE11-205ENST00000535120 HTTP42858 3142 aa9.16□□□□□ -0.94
MRE11-205ENST00000535120 CENPFP49454 3210 aa9.16□□□□□ -0.94
MRE11-205ENST00000535120 FAM205AQ6ZU69 1335 aa9.15□□□□□ -0.94
MRE11-205ENST00000535120 BTBD19C9JJ37 291 aa9.15□□□□□ -0.94
MRE11-205ENST00000535120 GRM8O00222 908 aa9.15□□□□□ -0.94
MRE11-205ENST00000535120 VAMP4O75379 141 aa9.15□□□□□ -0.94
MRE11-205ENST00000535120 FMNL1O95466 1100 aaPredicted RBP9.15□□□□□ -0.94
MRE11-205ENST00000535120 CETPP11597 493 aa9.15□□□□□ -0.94
MRE11-205ENST00000535120 METTL24Q5JXM2 366 aa9.15□□□□□ -0.94
MRE11-205ENST00000535120 CHRDL2Q6WN34 429 aa9.15□□□□□ -0.94
MRE11-205ENST00000535120 MIGA2Q7L4E1 593 aa9.15□□□□□ -0.94
MRE11-205ENST00000535120 TEPSINQ96N21 525 aa9.15□□□□□ -0.94
MRE11-205ENST00000535120 SPINK5Q9NQ38 1064 aaPredicted RBP9.15□□□□□ -0.94
MRE11-205ENST00000535120 TMOD2Q9NZR1 351 aa9.15□□□□□ -0.94
MRE11-205ENST00000535120 CPA4Q9UI42 421 aa9.15□□□□□ -0.94
MRE11-205ENST00000535120 MYH3P11055 1940 aa9.14□□□□□ -0.95
MRE11-205ENST00000535120 IRF6O14896 467 aa9.14□□□□□ -0.95
MRE11-205ENST00000535120 LACTBP83111 547 aaPredicted RBP9.14□□□□□ -0.95
MRE11-205ENST00000535120 TCP10Q12799 353 aa9.14□□□□□ -0.95
MRE11-205ENST00000535120 SNAPC2Q13487 334 aa9.14□□□□□ -0.95
MRE11-205ENST00000535120 UBE4AQ14139 1066 aa9.14□□□□□ -0.95
MRE11-205ENST00000535120 MTFR1Q15390 333 aa9.14□□□□□ -0.95
MRE11-205ENST00000535120 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.14□□□□□ -0.95
MRE11-205ENST00000535120 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.14□□□□□ -0.95
MRE11-205ENST00000535120 RAET1EQ8TD07 263 aa9.14□□□□□ -0.95
MRE11-205ENST00000535120 TEKT1Q969V4 418 aa9.14□□□□□ -0.95
MRE11-205ENST00000535120 SUCLG2Q96I99 432 aa9.14□□□□□ -0.95
MRE11-205ENST00000535120 SNCAIPQ9Y6H5 919 aa9.14□□□□□ -0.95
MRE11-205ENST00000535120 ZNF646O15015 1829 aaPredicted RBP9.14□□□□□ -0.95
MRE11-205ENST00000535120 SPDYE5A6NIY4 337 aa9.13□□□□□ -0.95
MRE11-205ENST00000535120 TLR2O60603 784 aa9.13□□□□□ -0.95
MRE11-205ENST00000535120 PSMC4P43686 418 aa9.13□□□□□ -0.95
MRE11-205ENST00000535120 LRRC24Q50LG9 513 aa9.13□□□□□ -0.95
MRE11-205ENST00000535120 CAVIN4Q5BKX8 364 aa9.13□□□□□ -0.95
MRE11-205ENST00000535120 ERO1BQ86YB8 467 aa9.13□□□□□ -0.95
MRE11-205ENST00000535120 KLHDC4Q8TBB5 520 aa9.13□□□□□ -0.95
MRE11-205ENST00000535120 SRCIN1Q9C0H9 1055 aa9.13□□□□□ -0.95
MRE11-205ENST00000535120 KIAA0100Q14667 2235 aaKnown RBP9.13□□□□□ -0.95
MRE11-205ENST00000535120 IL16Q14005 1332 aa9.12□□□□□ -0.95
MRE11-205ENST00000535120 INPP5BP32019 993 aa9.12□□□□□ -0.95
MRE11-205ENST00000535120 ZEB1P37275 1124 aaPredicted RBP9.12□□□□□ -0.95
MRE11-205ENST00000535120 BCAMP50895 628 aa9.12□□□□□ -0.95
MRE11-205ENST00000535120 CCDC27Q2M243 656 aa9.12□□□□□ -0.95
MRE11-205ENST00000535120 DCAF15Q66K64 600 aa9.12□□□□□ -0.95
MRE11-205ENST00000535120 MRS2Q9HD23 443 aa9.12□□□□□ -0.95
MRE11-205ENST00000535120 TAOK2Q9UL54 1235 aa9.12□□□□□ -0.95
MRE11-205ENST00000535120 BRCA2P51587 3418 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 MROH5Q6ZUA9 1318 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 PDHXO00330 501 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 NBPF7P0C2Y1 421 aaPredicted RBP9.11□□□□□ -0.95
MRE11-205ENST00000535120 CTGFP29279 349 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 PPIL2Q13356 520 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 FBXO33Q7Z6M2 555 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 TBC1D22AQ8WUA7 517 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 HOOK2Q96ED9 719 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 TRIM47Q96LD4 638 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 ZNF341Q9BYN7 854 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 RNF208Q9H0X6 261 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 BICC1Q9H694 974 aaKnown RBP9.11□□□□□ -0.95
MRE11-205ENST00000535120 RBM27Q9P2N5 1060 aaKnown RBP9.11□□□□□ -0.95
MRE11-205ENST00000535120 RIPOR2Q9Y4F9 1068 aa9.11□□□□□ -0.95
MRE11-205ENST00000535120 MYPNQ86TC9 1320 aa9.1□□□□□ -0.95
MRE11-205ENST00000535120 ALDH1L1O75891 902 aa9.1□□□□□ -0.95
MRE11-205ENST00000535120 CCL5P13501 91 aa9.1□□□□□ -0.95
MRE11-205ENST00000535120 OSBPP22059 807 aa9.1□□□□□ -0.95
MRE11-205ENST00000535120 HOXD10P28358 340 aa9.1□□□□□ -0.95
MRE11-205ENST00000535120 GRK4P32298 578 aa9.1□□□□□ -0.95
MRE11-205ENST00000535120 APOBEC3HQ6NTF7 200 aaKnown RBP9.1□□□□□ -0.95
MRE11-205ENST00000535120 ZDHHC15Q96MV8 337 aa9.1□□□□□ -0.95
MRE11-205ENST00000535120 SRRDQ9UH36 339 aa9.1□□□□□ -0.95
MRE11-205ENST00000535120 IFIT1P09914 478 aaKnown RBP9.09□□□□□ -0.95
MRE11-205ENST00000535120 CYP2C8P10632 490 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms