RNA–Protein interactions for RNA: ENST00000534938.6

FCF1-202, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-202ENST00000534938 TCP10L2B9ZVM9 353 aa12.83□□□□□ -0.36
FCF1-202ENST00000534938 DDX10Q13206 875 aaKnown RBP12.83□□□□□ -0.36
FCF1-202ENST00000534938 LDHAL6AQ6ZMR3 332 aa12.83□□□□□ -0.36
FCF1-202ENST00000534938 LINS1Q8NG48 757 aa12.83□□□□□ -0.36
FCF1-202ENST00000534938 DNAAF4Q8WXU2 420 aa12.83□□□□□ -0.36
FCF1-202ENST00000534938 PTPN18Q99952 460 aa12.83□□□□□ -0.36
FCF1-202ENST00000534938 BIN2Q9UBW5 565 aaPredicted RBP12.83□□□□□ -0.36
FCF1-202ENST00000534938 ZNF70Q9UC06 446 aaPredicted RBP12.83□□□□□ -0.36
FCF1-202ENST00000534938 JAG2Q9Y219 1238 aa12.83□□□□□ -0.36
FCF1-202ENST00000534938 SSC5DA1L4H1 1573 aa12.82□□□□□ -0.36
FCF1-202ENST00000534938 H0YGN5 161 aa12.82□□□□□ -0.36
FCF1-202ENST00000534938 CSF1RP07333 972 aa12.82□□□□□ -0.36
FCF1-202ENST00000534938 GJA5P36382 358 aa12.82□□□□□ -0.36
FCF1-202ENST00000534938 SNAPC2Q13487 334 aa12.82□□□□□ -0.36
FCF1-202ENST00000534938 VGLL4Q14135 290 aa12.82□□□□□ -0.36
FCF1-202ENST00000534938 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
FCF1-202ENST00000534938 TDRD3Q9H7E2 651 aaKnown RBP12.82□□□□□ -0.36
FCF1-202ENST00000534938 ZCCHC17Q9NP64 241 aaKnown RBP12.82□□□□□ -0.36
FCF1-202ENST00000534938 LAMB1P07942 1786 aa12.81□□□□□ -0.36
FCF1-202ENST00000534938 TLR2O60603 784 aa12.81□□□□□ -0.36
FCF1-202ENST00000534938 LACTBP83111 547 aaPredicted RBP12.81□□□□□ -0.36
FCF1-202ENST00000534938 FLIIQ13045 1269 aa12.81□□□□□ -0.36
FCF1-202ENST00000534938 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
FCF1-202ENST00000534938 TSPYL6Q8N831 410 aa12.81□□□□□ -0.36
FCF1-202ENST00000534938 RAET1EQ8TD07 263 aa12.81□□□□□ -0.36
FCF1-202ENST00000534938 SH3TC2Q8TF17 1288 aa12.81□□□□□ -0.36
FCF1-202ENST00000534938 BRI3BPQ8WY22 251 aa12.81□□□□□ -0.36
FCF1-202ENST00000534938 MS4A4AQ96JQ5 239 aa12.81□□□□□ -0.36
FCF1-202ENST00000534938 PCDHAC2Q9Y5I4 1007 aa12.81□□□□□ -0.36
FCF1-202ENST00000534938 NR2E3Q9Y5X4 410 aa12.81□□□□□ -0.36
FCF1-202ENST00000534938 ZNF646O15015 1829 aaPredicted RBP12.81□□□□□ -0.36
FCF1-202ENST00000534938 HIBADHP31937 336 aaKnown RBP12.8□□□□□ -0.36
FCF1-202ENST00000534938 CAVIN4Q5BKX8 364 aa12.8□□□□□ -0.36
FCF1-202ENST00000534938 DCAF15Q66K64 600 aa12.8□□□□□ -0.36
FCF1-202ENST00000534938 ERO1BQ86YB8 467 aa12.8□□□□□ -0.36
FCF1-202ENST00000534938 TSR2Q969E8 191 aaKnown RBP12.8□□□□□ -0.36
FCF1-202ENST00000534938 TRIM47Q96LD4 638 aa12.8□□□□□ -0.36
FCF1-202ENST00000534938 FMNL1O95466 1100 aaPredicted RBP12.79□□□□□ -0.36
FCF1-202ENST00000534938 CRKP46108 304 aa12.79□□□□□ -0.36
FCF1-202ENST00000534938 UBXN2AP68543 259 aa12.79□□□□□ -0.36
FCF1-202ENST00000534938 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.79□□□□□ -0.36
FCF1-202ENST00000534938 FAM43AQ8N2R8 423 aa12.79□□□□□ -0.36
FCF1-202ENST00000534938 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.79□□□□□ -0.36
FCF1-202ENST00000534938 TBC1D22AQ8WUA7 517 aa12.79□□□□□ -0.36
FCF1-202ENST00000534938 TEKT1Q969V4 418 aa12.79□□□□□ -0.36
FCF1-202ENST00000534938 WRNIP1Q96S55 665 aa12.79□□□□□ -0.36
FCF1-202ENST00000534938 TMEM39BQ9GZU3 492 aa12.79□□□□□ -0.36
FCF1-202ENST00000534938 C9orf78Q9NZ63 289 aaPredicted RBP12.79□□□□□ -0.36
FCF1-202ENST00000534938 MAST3O60307 1309 aa12.79□□□□□ -0.36
FCF1-202ENST00000534938 SPDYE5A6NIY4 337 aa12.78□□□□□ -0.36
FCF1-202ENST00000534938 SNAP23O00161 211 aa12.78□□□□□ -0.36
FCF1-202ENST00000534938 UBE4AQ14139 1066 aa12.78□□□□□ -0.36
FCF1-202ENST00000534938 LMBR1LQ6UX01 489 aa12.78□□□□□ -0.36
FCF1-202ENST00000534938 SLC17A8Q8NDX2 589 aa12.78□□□□□ -0.36
FCF1-202ENST00000534938 FAM205AQ6ZU69 1335 aa12.78□□□□□ -0.36
FCF1-202ENST00000534938 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
FCF1-202ENST00000534938 GRK4P32298 578 aa12.77□□□□□ -0.37
FCF1-202ENST00000534938 PSMC4P43686 418 aa12.77□□□□□ -0.37
FCF1-202ENST00000534938 G2E3Q7L622 706 aa12.77□□□□□ -0.37
FCF1-202ENST00000534938 BTBD19C9JJ37 291 aa12.76□□□□□ -0.37
FCF1-202ENST00000534938 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
FCF1-202ENST00000534938 GYG1P46976 350 aa12.76□□□□□ -0.37
FCF1-202ENST00000534938 CASP7P55210 303 aa12.76□□□□□ -0.37
FCF1-202ENST00000534938 HDLBPQ00341 1268 aaKnown RBP12.76□□□□□ -0.37
FCF1-202ENST00000534938 CHAF1AQ13111 956 aaPredicted RBP12.76□□□□□ -0.37
FCF1-202ENST00000534938 PPIL2Q13356 520 aa12.76□□□□□ -0.37
FCF1-202ENST00000534938 TDRD7Q8NHU6 1098 aaKnown RBP12.76□□□□□ -0.37
FCF1-202ENST00000534938 RNF208Q9H0X6 261 aa12.76□□□□□ -0.37
FCF1-202ENST00000534938 PLSCR2Q9NRY7 297 aa12.76□□□□□ -0.37
FCF1-202ENST00000534938 DLL1O00548 723 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 IRF6O14896 467 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 FCGRTP55899 365 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 FOXO4P98177 505 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 PPATQ06203 517 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 MROH5Q6ZUA9 1318 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 MYPNQ86TC9 1320 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 TEPSINQ96N21 525 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 ZNF341Q9BYN7 854 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 ARHGAP39Q9C0H5 1083 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 OTOFQ9HC10 1997 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 RBM27Q9P2N5 1060 aaKnown RBP12.75□□□□□ -0.37
FCF1-202ENST00000534938 SRRDQ9UH36 339 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
FCF1-202ENST00000534938 IRS2Q9Y4H2 1338 aa12.74□□□□□ -0.37
FCF1-202ENST00000534938 GRM8O00222 908 aa12.74□□□□□ -0.37
FCF1-202ENST00000534938 PDHXO00330 501 aa12.74□□□□□ -0.37
FCF1-202ENST00000534938 EVI5O60447 810 aa12.74□□□□□ -0.37
FCF1-202ENST00000534938 GJB1P08034 283 aa12.74□□□□□ -0.37
FCF1-202ENST00000534938 CAPN2P17655 700 aa12.74□□□□□ -0.37
FCF1-202ENST00000534938 GJA8P48165 433 aa12.74□□□□□ -0.37
FCF1-202ENST00000534938 ANKRD23Q86SG2 305 aa12.74□□□□□ -0.37
FCF1-202ENST00000534938 FAM83AQ86UY5 434 aa12.74□□□□□ -0.37
FCF1-202ENST00000534938 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.74□□□□□ -0.37
FCF1-202ENST00000534938 ZKSCAN4Q969J2 545 aaPredicted RBP12.74□□□□□ -0.37
FCF1-202ENST00000534938 ZNF594Q96JF6 807 aaPredicted RBP12.74□□□□□ -0.37
FCF1-202ENST00000534938 PARK7Q99497 189 aaKnown RBP12.74□□□□□ -0.37
FCF1-202ENST00000534938 CPA4Q9UI42 421 aa12.74□□□□□ -0.37
FCF1-202ENST00000534938 AOX1Q06278 1338 aa12.73□□□□□ -0.37
FCF1-202ENST00000534938 IL16Q14005 1332 aa12.73□□□□□ -0.37
FCF1-202ENST00000534938 HAX1O00165 279 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms