RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 IGSF3O75054 1194 aa14.42□□□□□ -0.1
COMMD9-208ENST00000533643 DDNO94850 711 aaPredicted RBP14.42□□□□□ -0.1
COMMD9-208ENST00000533643 PDE6AP16499 860 aa14.42□□□□□ -0.1
COMMD9-208ENST00000533643 SLFNL1Q499Z3 407 aa14.42□□□□□ -0.1
COMMD9-208ENST00000533643 SLC9C2Q5TAH2 1124 aa14.42□□□□□ -0.1
COMMD9-208ENST00000533643 TICAM2Q86XR7 235 aa14.42□□□□□ -0.1
COMMD9-208ENST00000533643 DZIP1Q86YF9 867 aaKnown RBP14.42□□□□□ -0.1
COMMD9-208ENST00000533643 MAGEB6Q8N7X4 407 aa14.42□□□□□ -0.1
COMMD9-208ENST00000533643 DPF2Q92785 391 aa14.42□□□□□ -0.1
COMMD9-208ENST00000533643 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.42□□□□□ -0.1
COMMD9-208ENST00000533643 TCRBV5S4A2TA0A5A2 114 aa14.41□□□□□ -0.1
COMMD9-208ENST00000533643 SHTN1A0MZ66 631 aa14.41□□□□□ -0.1
COMMD9-208ENST00000533643 GLTPD2A6NH11 291 aa14.41□□□□□ -0.1
COMMD9-208ENST00000533643 USP17L8P0C7I0 530 aa14.41□□□□□ -0.1
COMMD9-208ENST00000533643 ADD2P35612 726 aa14.41□□□□□ -0.1
COMMD9-208ENST00000533643 SCNN1DP51172 638 aa14.41□□□□□ -0.1
COMMD9-208ENST00000533643 ZNF280AP59817 542 aaPredicted RBP14.41□□□□□ -0.1
COMMD9-208ENST00000533643 DIXDC1Q155Q3 683 aa14.41□□□□□ -0.1
COMMD9-208ENST00000533643 NAA16Q6N069 864 aaPredicted RBP14.41□□□□□ -0.1
COMMD9-208ENST00000533643 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
COMMD9-208ENST00000533643 MRIQ9BWK5 157 aa14.41□□□□□ -0.1
COMMD9-208ENST00000533643 ZFYP08048 801 aaPredicted RBP14.4□□□□□ -0.1
COMMD9-208ENST00000533643 CYP7A1P22680 504 aa14.4□□□□□ -0.1
COMMD9-208ENST00000533643 GSTO1P78417 241 aa14.4□□□□□ -0.1
COMMD9-208ENST00000533643 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
COMMD9-208ENST00000533643 LRRFIP1Q32MZ4 808 aaKnown RBP14.4□□□□□ -0.1
COMMD9-208ENST00000533643 ZSCAN25Q6NSZ9 544 aa14.4□□□□□ -0.1
COMMD9-208ENST00000533643 CNOT7Q9UIV1 285 aaKnown RBP14.4□□□□□ -0.1
COMMD9-208ENST00000533643 MYO5AQ9Y4I1 1855 aaKnown RBP14.4□□□□□ -0.1
COMMD9-208ENST00000533643 MAST3O60307 1309 aa14.4□□□□□ -0.1
COMMD9-208ENST00000533643 ZNF532Q9HCE3 1301 aa14.4□□□□□ -0.1
COMMD9-208ENST00000533643 DOCK2Q92608 1830 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 RFX7Q2KHR2 1363 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 CHMLP26374 656 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 CRKP46108 304 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 UBE3CQ15386 1083 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 ZMYM1Q5SVZ6 1142 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 TMED8Q6PL24 325 aaPredicted RBP14.39□□□□□ -0.11
COMMD9-208ENST00000533643 HHIPL2Q6UWX4 724 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 ADGRA1Q86SQ6 560 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 SLF2Q8IX21 1173 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 MICALL2Q8IY33 904 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 OGFOD1Q8N543 542 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 FAM163AQ96GL9 167 aaPredicted RBP14.39□□□□□ -0.11
COMMD9-208ENST00000533643 L3MBTL3Q96JM7 780 aaPredicted RBP14.39□□□□□ -0.11
COMMD9-208ENST00000533643 GPRC5DQ9NZD1 345 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 SERPINA10Q9UK55 444 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 HDAC9Q9UKV0 1011 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 DAGLAQ9Y4D2 1042 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 MROH7-TTC4A0A0A0MT08 1334 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 GAKO14976 1311 aa14.39□□□□□ -0.11
COMMD9-208ENST00000533643 HIP1O00291 1037 aa14.38□□□□□ -0.11
COMMD9-208ENST00000533643 LDHCP07864 332 aa14.38□□□□□ -0.11
COMMD9-208ENST00000533643 MMP14P50281 582 aa14.38□□□□□ -0.11
COMMD9-208ENST00000533643 NMIQ13287 307 aaPredicted RBP14.38□□□□□ -0.11
COMMD9-208ENST00000533643 OSBP2Q969R2 916 aa14.38□□□□□ -0.11
COMMD9-208ENST00000533643 TEKT1Q969V4 418 aa14.38□□□□□ -0.11
COMMD9-208ENST00000533643 FAM227BQ96M60 508 aa14.38□□□□□ -0.11
COMMD9-208ENST00000533643 SEC62Q99442 399 aaKnown RBP14.38□□□□□ -0.11
COMMD9-208ENST00000533643 PCDHAC2Q9Y5I4 1007 aa14.38□□□□□ -0.11
COMMD9-208ENST00000533643 A0A0D9SFI3 127 aa14.37□□□□□ -0.11
COMMD9-208ENST00000533643 H7C1D1 291 aa14.37□□□□□ -0.11
COMMD9-208ENST00000533643 CDC45O75419 566 aa14.37□□□□□ -0.11
COMMD9-208ENST00000533643 EPS15P42566 896 aa14.37□□□□□ -0.11
COMMD9-208ENST00000533643 CFAP100Q494V2 611 aa14.37□□□□□ -0.11
COMMD9-208ENST00000533643 APOBEC3HQ6NTF7 200 aaKnown RBP14.37□□□□□ -0.11
COMMD9-208ENST00000533643 MTMR14Q8NCE2 650 aa14.37□□□□□ -0.11
COMMD9-208ENST00000533643 APPBP2Q92624 585 aa14.37□□□□□ -0.11
COMMD9-208ENST00000533643 ZBED3Q96IU2 234 aaPredicted RBP14.37□□□□□ -0.11
COMMD9-208ENST00000533643 ZDHHC15Q96MV8 337 aa14.37□□□□□ -0.11
COMMD9-208ENST00000533643 PUS7LQ9H0K6 701 aaKnown RBP14.37□□□□□ -0.11
COMMD9-208ENST00000533643 MYOZ2Q9NPC6 264 aa14.37□□□□□ -0.11
COMMD9-208ENST00000533643 DIAPH3Q9NSV4 1193 aa14.37□□□□□ -0.11
COMMD9-208ENST00000533643 GPR75-ASB3A0A0A6YYF3 556 aa14.36□□□□□ -0.11
COMMD9-208ENST00000533643 POTECB2RU33 542 aa14.36□□□□□ -0.11
COMMD9-208ENST00000533643 M0R2C6 588 aa14.36□□□□□ -0.11
COMMD9-208ENST00000533643 EGFRP00533 1210 aa14.36□□□□□ -0.11
COMMD9-208ENST00000533643 RBM5P52756 815 aaKnown RBP eCLIP14.36□□□□□ -0.11
COMMD9-208ENST00000533643 PPP4CP60510 307 aa14.36□□□□□ -0.11
COMMD9-208ENST00000533643 DYNLL1P63167 89 aaKnown RBP14.36□□□□□ -0.11
COMMD9-208ENST00000533643 DLGAP5Q15398 846 aa14.36□□□□□ -0.11
COMMD9-208ENST00000533643 SAMD7Q7Z3H4 446 aa14.36□□□□□ -0.11
COMMD9-208ENST00000533643 MIGA1Q8NAN2 632 aa14.36□□□□□ -0.11
COMMD9-208ENST00000533643 PRMT6Q96LA8 375 aaPredicted RBP14.36□□□□□ -0.11
COMMD9-208ENST00000533643 HELLSQ9NRZ9 838 aa14.36□□□□□ -0.11
COMMD9-208ENST00000533643 MAST2Q6P0Q8 1798 aa14.36□□□□□ -0.11
COMMD9-208ENST00000533643 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
COMMD9-208ENST00000533643 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
COMMD9-208ENST00000533643 LMOD1P29536 600 aaPredicted RBP14.35□□□□□ -0.11
COMMD9-208ENST00000533643 BTDP43251 543 aa14.35□□□□□ -0.11
COMMD9-208ENST00000533643 TBC1D10BQ4KMP7 808 aaPredicted RBP14.35□□□□□ -0.11
COMMD9-208ENST00000533643 RBM26Q5T8P6 1007 aaKnown RBP14.35□□□□□ -0.11
COMMD9-208ENST00000533643 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
COMMD9-208ENST00000533643 RIOK1Q9BRS2 568 aaKnown RBP14.35□□□□□ -0.11
COMMD9-208ENST00000533643 HACL1Q9UJ83 578 aa14.35□□□□□ -0.11
COMMD9-208ENST00000533643 MAGEB6P1A0A0J9YX57 407 aa14.34□□□□□ -0.11
COMMD9-208ENST00000533643 MBD4O95243 580 aa14.34□□□□□ -0.11
COMMD9-208ENST00000533643 MCMDC2Q4G0Z9 681 aa14.34□□□□□ -0.11
COMMD9-208ENST00000533643 CCDC129Q6ZRS4 1044 aa14.34□□□□□ -0.11
COMMD9-208ENST00000533643 TRPM4Q8TD43 1214 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms