RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 FAM160A1Q05DH4 1040 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 TMEM132AQ24JP5 1023 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 PARP10Q53GL7 1025 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 TMCO3Q6UWJ1 677 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 CMTR1Q8N1G2 835 aaKnown RBP14.23□□□□□ -0.13
RAD50-209ENST00000533482 SYNE4Q8N205 404 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 PLIN2Q99541 437 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 ADGRB3O60242 1522 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 LOC102724428A0A0B4J2F2 783 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 PRKCSHP14314 528 aaPredicted RBP14.23□□□□□ -0.13
RAD50-209ENST00000533482 CTSWP56202 376 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 SIK1P57059 783 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 CARD10Q9BWT7 1032 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 N4BP3O15049 544 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 HIBADHP31937 336 aaKnown RBP14.22□□□□□ -0.13
RAD50-209ENST00000533482 MAP4K1Q92918 833 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 FEZ1Q99689 392 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 NR1I2O75469 434 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 UFL1O94874 794 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 PI4K2BQ8TCG2 481 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 PIGBQ92521 554 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 PPRC1Q5VV67 1664 aaKnown RBP14.22□□□□□ -0.13
RAD50-209ENST00000533482 POLR3GO15318 223 aaPredicted RBP14.22□□□□□ -0.13
RAD50-209ENST00000533482 TMTC2Q8N394 836 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 SPATA5Q8NB90 893 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 GTF3C6Q969F1 213 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 KIF2CQ99661 725 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 TRIM75PA6NK02 468 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 CASQ1P31415 396 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 PHKA1P46020 1223 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 CABP5Q9NP86 173 aa14.22□□□□□ -0.13
RAD50-209ENST00000533482 ANGEL1Q9UNK9 670 aaKnown RBP14.22□□□□□ -0.13
RAD50-209ENST00000533482 A0A087WWV3 80 aa14.21□□□□□ -0.13
RAD50-209ENST00000533482 KIF5CO60282 957 aa14.21□□□□□ -0.13
RAD50-209ENST00000533482 IGSF3O75054 1194 aa14.21□□□□□ -0.13
RAD50-209ENST00000533482 HSPD1P10809 573 aaKnown RBP14.21□□□□□ -0.13
RAD50-209ENST00000533482 CCDC181Q5TID7 509 aa14.21□□□□□ -0.13
RAD50-209ENST00000533482 USP28Q96RU2 1077 aa14.21□□□□□ -0.13
RAD50-209ENST00000533482 COPRSQ9NQ92 184 aa14.21□□□□□ -0.13
RAD50-209ENST00000533482 SEC31BQ9NQW1 1179 aa14.21□□□□□ -0.13
RAD50-209ENST00000533482 IGKV5-2P06315 115 aa14.21□□□□□ -0.13
RAD50-209ENST00000533482 CYP21A2P08686 494 aa14.21□□□□□ -0.13
RAD50-209ENST00000533482 ZNF804AQ7Z570 1209 aa14.21□□□□□ -0.13
RAD50-209ENST00000533482 ZBTB38Q8NAP3 1195 aaPredicted RBP14.21□□□□□ -0.13
RAD50-209ENST00000533482 CLSTN2Q9H4D0 955 aa14.21□□□□□ -0.13
RAD50-209ENST00000533482 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
RAD50-209ENST00000533482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.21□□□□□ -0.134e-7■■■■■ 29.8
RAD50-209ENST00000533482 HLA-DOAP06340 250 aa14.21□□□□□ -0.14
RAD50-209ENST00000533482 ADD1P35611 737 aaKnown RBP14.21□□□□□ -0.14
RAD50-209ENST00000533482 CUL4AQ13619 759 aa14.21□□□□□ -0.14
RAD50-209ENST00000533482 RBM26Q5T8P6 1007 aaKnown RBP14.21□□□□□ -0.14
RAD50-209ENST00000533482 SDR42E1Q8WUS8 393 aa14.21□□□□□ -0.14
RAD50-209ENST00000533482 TCP11L1Q9NUJ3 509 aa14.21□□□□□ -0.14
RAD50-209ENST00000533482 RRAGBQ5VZM2 374 aa14.2□□□□□ -0.14
RAD50-209ENST00000533482 CCDC102AQ96A19 550 aa14.2□□□□□ -0.14
RAD50-209ENST00000533482 ANO1Q5XXA6 986 aa14.2□□□□□ -0.14
RAD50-209ENST00000533482 WDR78Q5VTH9 848 aa14.2□□□□□ -0.14
RAD50-209ENST00000533482 SEPT11Q9NVA2 429 aaKnown RBP14.2□□□□□ -0.14
RAD50-209ENST00000533482 CRKLP46109 303 aaKnown RBP14.2□□□□□ -0.14
RAD50-209ENST00000533482 PTPN12Q05209 780 aaKnown RBP14.2□□□□□ -0.14
RAD50-209ENST00000533482 BRAPQ7Z569 592 aa14.2□□□□□ -0.14
RAD50-209ENST00000533482 CDCA7Q9BWT1 371 aaPredicted RBP14.2□□□□□ -0.14
RAD50-209ENST00000533482 KCNJ14Q9UNX9 436 aa14.2□□□□□ -0.14
RAD50-209ENST00000533482 RGS12O14924 1447 aa14.2□□□□□ -0.14
RAD50-209ENST00000533482 MTIF2P46199 727 aaKnown RBP14.19□□□□□ -0.14
RAD50-209ENST00000533482 GIGYF2Q6Y7W6 1299 aaKnown RBP14.19□□□□□ -0.14
RAD50-209ENST00000533482 UIMC1Q96RL1 719 aa14.19□□□□□ -0.14
RAD50-209ENST00000533482 HAUS7Q99871 368 aa14.19□□□□□ -0.14
RAD50-209ENST00000533482 FTOQ9C0B1 505 aaKnown RBP eCLIP14.19□□□□□ -0.14
RAD50-209ENST00000533482 V9GY48 417 aaPredicted RBP14.19□□□□□ -0.14
RAD50-209ENST00000533482 FGAP02671 866 aa14.19□□□□□ -0.14
RAD50-209ENST00000533482 MCM7P33993 719 aa14.19□□□□□ -0.14
RAD50-209ENST00000533482 CHMP4BP1P59074 171 aa14.19□□□□□ -0.14
RAD50-209ENST00000533482 RPS8P62241 208 aaKnown RBP14.19□□□□□ -0.14
RAD50-209ENST00000533482 CCDC12Q8WUD4 166 aaPredicted RBP14.19□□□□□ -0.14
RAD50-209ENST00000533482 GNAT2P19087 354 aa14.19□□□□□ -0.14
RAD50-209ENST00000533482 NAPAP54920 295 aa14.19□□□□□ -0.14
RAD50-209ENST00000533482 CCDC150Q8NCX0 1101 aa14.19□□□□□ -0.14
RAD50-209ENST00000533482 ZHX1Q9UKY1 873 aaPredicted RBP14.19□□□□□ -0.14
RAD50-209ENST00000533482 SSH2Q76I76 1423 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 GSTO1P78417 241 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 LRMPQ12912 555 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 ZNF174Q15697 407 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 USPL1Q5W0Q7 1092 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 DIS3L2Q8IYB7 885 aaKnown RBP14.18□□□□□ -0.14
RAD50-209ENST00000533482 LLPHQ9BRT6 129 aaKnown RBP14.18□□□□□ -0.14
RAD50-209ENST00000533482 MAP3K15Q6ZN16 1313 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 PCCAP05165 728 aaPredicted RBP14.18□□□□□ -0.14
RAD50-209ENST00000533482 POLA2Q14181 598 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 PPP1R9BQ96SB3 815 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 VEZTQ9HBM0 779 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 LRRC7Q96NW7 1537 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 KRT40Q6A162 431 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 SPATA31A3Q5VYP0 1347 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 ERLIN1O75477 346 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 FAM47AQ5JRC9 791 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 SYT10Q6XYQ8 523 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 TEX11Q8IYF3 940 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 CENPHQ9H3R5 247 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 DENND2AQ9ULE3 1009 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms