RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 MYH2Q9UKX2 1941 aa17■□□□□ 0.31
HIF3A-215ENST00000533145 FZD9O00144 591 aa16.99■□□□□ 0.31
HIF3A-215ENST00000533145 EPB41L2O43491 1005 aaKnown RBP16.99■□□□□ 0.31
HIF3A-215ENST00000533145 GRIN3BO60391 1043 aa16.99■□□□□ 0.31
HIF3A-215ENST00000533145 PRDX5P30044 214 aa16.99■□□□□ 0.31
HIF3A-215ENST00000533145 MCMDC2Q4G0Z9 681 aa16.99■□□□□ 0.31
HIF3A-215ENST00000533145 ZNF384Q8TF68 577 aa16.99■□□□□ 0.31
HIF3A-215ENST00000533145 FAM163AQ96GL9 167 aaPredicted RBP16.99■□□□□ 0.31
HIF3A-215ENST00000533145 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
HIF3A-215ENST00000533145 RAI14Q9P0K7 980 aa16.99■□□□□ 0.31
HIF3A-215ENST00000533145 ZNF532Q9HCE3 1301 aa16.98■□□□□ 0.31
HIF3A-215ENST00000533145 A0A0D9SFI3 127 aa16.98■□□□□ 0.31
HIF3A-215ENST00000533145 CHGBP05060 677 aa16.98■□□□□ 0.31
HIF3A-215ENST00000533145 MECOMQ03112 1051 aa16.98■□□□□ 0.31
HIF3A-215ENST00000533145 CERS5Q8N5B7 392 aa16.98■□□□□ 0.31
HIF3A-215ENST00000533145 MAGEB6Q8N7X4 407 aa16.98■□□□□ 0.31
HIF3A-215ENST00000533145 OSBP2Q969R2 916 aa16.98■□□□□ 0.31
HIF3A-215ENST00000533145 JAG2Q9Y219 1238 aa16.98■□□□□ 0.31
HIF3A-215ENST00000533145 MYO3BQ8WXR4 1341 aa16.97■□□□□ 0.31
HIF3A-215ENST00000533145 SEC24BO95487 1268 aa16.97■□□□□ 0.31
HIF3A-215ENST00000533145 LDHCP07864 332 aa16.97■□□□□ 0.31
HIF3A-215ENST00000533145 GSTO1P78417 241 aa16.97■□□□□ 0.31
HIF3A-215ENST00000533145 CXCL9Q07325 125 aa16.97■□□□□ 0.31
HIF3A-215ENST00000533145 GRIK5Q16478 980 aa16.97■□□□□ 0.31
HIF3A-215ENST00000533145 NAA16Q6N069 864 aaPredicted RBP16.97■□□□□ 0.31
HIF3A-215ENST00000533145 IL25Q9H293 177 aa16.97■□□□□ 0.31
HIF3A-215ENST00000533145 MAST3O60307 1309 aa16.96■□□□□ 0.31
HIF3A-215ENST00000533145 PSMD14O00487 310 aa16.96■□□□□ 0.31
HIF3A-215ENST00000533145 REC8O95072 547 aa16.96■□□□□ 0.31
HIF3A-215ENST00000533145 CYP7A1P22680 504 aa16.96■□□□□ 0.31
HIF3A-215ENST00000533145 MMP14P50281 582 aa16.96■□□□□ 0.31
HIF3A-215ENST00000533145 MFAP1P55081 439 aaKnown RBP16.96■□□□□ 0.31
HIF3A-215ENST00000533145 HDLBPQ00341 1268 aaKnown RBP16.96■□□□□ 0.31
HIF3A-215ENST00000533145 TNIP1Q15025 636 aa16.96■□□□□ 0.31
HIF3A-215ENST00000533145 GPR162Q16538 588 aa16.96■□□□□ 0.31
HIF3A-215ENST00000533145 SLFNL1Q499Z3 407 aa16.96■□□□□ 0.31
HIF3A-215ENST00000533145 CIAPIN1Q6FI81 312 aa16.96■□□□□ 0.31
HIF3A-215ENST00000533145 RSBN1LQ6PCB5 846 aaPredicted RBP16.96■□□□□ 0.31
HIF3A-215ENST00000533145 DZIP1Q86YF9 867 aaKnown RBP16.96■□□□□ 0.31
HIF3A-215ENST00000533145 SLF2Q8IX21 1173 aa16.96■□□□□ 0.31
HIF3A-215ENST00000533145 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
HIF3A-215ENST00000533145 GMLQ99445 158 aa16.96■□□□□ 0.31
HIF3A-215ENST00000533145 PUS7LQ9H0K6 701 aaKnown RBP16.96■□□□□ 0.31
HIF3A-215ENST00000533145 AGBL3Q8NEM8 1001 aa16.95■□□□□ 0.3
HIF3A-215ENST00000533145 FBXW7Q969H0 707 aa16.95■□□□□ 0.3
HIF3A-215ENST00000533145 RAD17O75943 681 aa16.94■□□□□ 0.3
HIF3A-215ENST00000533145 EIF6P56537 245 aaKnown RBP16.94■□□□□ 0.3
HIF3A-215ENST00000533145 PPP4CP60510 307 aa16.94■□□□□ 0.3
HIF3A-215ENST00000533145 HHIPL2Q6UWX4 724 aa16.94■□□□□ 0.3
HIF3A-215ENST00000533145 ZNF589Q86UQ0 364 aaPredicted RBP16.94■□□□□ 0.3
HIF3A-215ENST00000533145 MXD3Q9BW11 206 aa16.94■□□□□ 0.3
HIF3A-215ENST00000533145 GAKO14976 1311 aa16.94■□□□□ 0.3
HIF3A-215ENST00000533145 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
HIF3A-215ENST00000533145 M0R2C6 588 aa16.93■□□□□ 0.3
HIF3A-215ENST00000533145 C1QTNF8P60827 252 aa16.93■□□□□ 0.3
HIF3A-215ENST00000533145 ADGRA1Q86SQ6 560 aa16.93■□□□□ 0.3
HIF3A-215ENST00000533145 CERS3Q8IU89 383 aa16.93■□□□□ 0.3
HIF3A-215ENST00000533145 STRBPQ96SI9 672 aaKnown RBP16.93■□□□□ 0.3
HIF3A-215ENST00000533145 RIOK1Q9BRS2 568 aaKnown RBP16.93■□□□□ 0.3
HIF3A-215ENST00000533145 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
HIF3A-215ENST00000533145 LSG1Q9H089 658 aaKnown RBP16.93■□□□□ 0.3
HIF3A-215ENST00000533145 TTF2Q9UNY4 1162 aaKnown RBP16.93■□□□□ 0.3
HIF3A-215ENST00000533145 MROH7-TTC4A0A0A0MT08 1334 aa16.93■□□□□ 0.3
HIF3A-215ENST00000533145 GPR75-ASB3A0A0A6YYF3 556 aa16.92■□□□□ 0.3
HIF3A-215ENST00000533145 GPAA1O43292 621 aa16.92■□□□□ 0.3
HIF3A-215ENST00000533145 RPS12P25398 132 aaKnown RBP16.92■□□□□ 0.3
HIF3A-215ENST00000533145 IFFO2Q5TF58 517 aa16.92■□□□□ 0.3
HIF3A-215ENST00000533145 KIAA1211Q6ZU35 1233 aa16.92■□□□□ 0.3
HIF3A-215ENST00000533145 DSCC1Q9BVC3 393 aa16.92■□□□□ 0.3
HIF3A-215ENST00000533145 UTRNP46939 3433 aa16.92■□□□□ 0.3
HIF3A-215ENST00000533145 RPAP1Q9BWH6 1393 aaPredicted RBP16.91■□□□□ 0.3
HIF3A-215ENST00000533145 TIAM2Q8IVF5 1701 aa16.91■□□□□ 0.3
HIF3A-215ENST00000533145 MAGEB6P1A0A0J9YX57 407 aa16.91■□□□□ 0.3
HIF3A-215ENST00000533145 GNAT2P19087 354 aa16.91■□□□□ 0.3
HIF3A-215ENST00000533145 DPF2Q92785 391 aa16.91■□□□□ 0.3
HIF3A-215ENST00000533145 MAP4K1Q92918 833 aa16.91■□□□□ 0.3
HIF3A-215ENST00000533145 AIDAQ96BJ3 306 aa16.91■□□□□ 0.3
HIF3A-215ENST00000533145 SERPINA10Q9UK55 444 aa16.91■□□□□ 0.3
HIF3A-215ENST00000533145 ZC3H4Q9UPT8 1303 aaKnown RBP16.91■□□□□ 0.3
HIF3A-215ENST00000533145 PATL2C9JE40 543 aaKnown RBP16.9■□□□□ 0.3
HIF3A-215ENST00000533145 BAG3O95817 575 aa16.9■□□□□ 0.3
HIF3A-215ENST00000533145 HSPD1P10809 573 aaKnown RBP16.9■□□□□ 0.3
HIF3A-215ENST00000533145 DIXDC1Q155Q3 683 aa16.9■□□□□ 0.3
HIF3A-215ENST00000533145 C9orf131Q5VYM1 1079 aa16.9■□□□□ 0.3
HIF3A-215ENST00000533145 CCDC129Q6ZRS4 1044 aa16.9■□□□□ 0.3
HIF3A-215ENST00000533145 KIAA0825Q8IV33 1275 aa16.9■□□□□ 0.3
HIF3A-215ENST00000533145 TEKT1Q969V4 418 aa16.9■□□□□ 0.3
HIF3A-215ENST00000533145 ZDHHC15Q96MV8 337 aa16.9■□□□□ 0.3
HIF3A-215ENST00000533145 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
HIF3A-215ENST00000533145 ANO2Q9NQ90 1003 aa16.9■□□□□ 0.3
HIF3A-215ENST00000533145 RNF181Q9P0P0 153 aa16.9■□□□□ 0.3
HIF3A-215ENST00000533145 HDAC9Q9UKV0 1011 aa16.9■□□□□ 0.3
HIF3A-215ENST00000533145 CDK5RAP2Q96SN8 1893 aa16.89■□□□□ 0.29
HIF3A-215ENST00000533145 MBD4O95243 580 aa16.89■□□□□ 0.29
HIF3A-215ENST00000533145 PLCG2P16885 1265 aa16.89■□□□□ 0.29
HIF3A-215ENST00000533145 CRKP46108 304 aa16.89■□□□□ 0.29
HIF3A-215ENST00000533145 PTH1RQ03431 593 aa16.89■□□□□ 0.29
HIF3A-215ENST00000533145 ALX1Q15699 326 aa16.89■□□□□ 0.29
HIF3A-215ENST00000533145 MIGA1Q8NAN2 632 aa16.89■□□□□ 0.29
HIF3A-215ENST00000533145 MTMR14Q8NCE2 650 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms