RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	FKBP1A	P62942	108 aa	Known RBP	11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	RABEP1	Q15276	862 aa		11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	MICALL2	Q8IY33	904 aa		11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	CNTROB	Q8N137	903 aa		11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	GML	Q99445	158 aa		11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	DNAJC2	Q99543	621 aa	Known RBP	11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	TBC1D2	Q9BYX2	928 aa		11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	BOLA2	Q9H3K6	86 aa		11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	GPRC5D	Q9NZD1	345 aa		11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	ABCF2	Q9UG63	623 aa		11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	NDUFB9	Q9Y6M9	179 aa		11.39	□□□□□ -0.59
NXF1-209	ENST00000531474	PSME4	Q14997	1843 aa		11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	SHTN1	A0MZ66	631 aa		11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	IQCA1L	A6NCM1	817 aa		11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	GRIK5	Q16478	980 aa		11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	ZGPAT	Q8N5A5	531 aa	Known RBP	11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	RUFY2	Q8WXA3	655 aa		11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	DPF2	Q92785	391 aa		11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	RRAGC	Q9HB90	399 aa		11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	NMRK2	Q9NPI5	230 aa		11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	CNOT7	Q9UIV1	285 aa	Known RBP	11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	HACL1	Q9UJ83	578 aa		11.38	□□□□□ -0.59
NXF1-209	ENST00000531474	SALL1	Q9NSC2	1324 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	ZNF646	O15015	1829 aa	Predicted RBP	11.37	□□□□□ -0.59
NXF1-209	ENST00000531474		H7C1D1	291 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	HIP1	O00291	1037 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	GOLIM4	O00461	696 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	CYP2E1	P05181	493 aa	Predicted RBP	11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	LDHB	P07195	334 aa	Known RBP	11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	PRDX5	P30044	214 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	EPHX2	P34913	555 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	EPS15	P42566	896 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	SLC4A3	P48751	1232 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	TICAM2	Q86XR7	235 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	DZIP1	Q86YF9	867 aa	Known RBP	11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	OGFOD1	Q8N543	542 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	RILPL2	Q969X0	211 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	HAUS7	Q99871	368 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	PIH1D3	Q9NQM4	214 aa	Known RBP	11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	LRP2BP	Q9P2M1	347 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	HDAC9	Q9UKV0	1011 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	TTF2	Q9UNY4	1162 aa	Known RBP	11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	WDR90	Q96KV7	1748 aa		11.37	□□□□□ -0.59
NXF1-209	ENST00000531474	MAP4K4	O95819	1239 aa	Predicted RBP	11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	VEGFA	P15692	232 aa	Predicted RBP	11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	CHML	P26374	656 aa		11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	ZNF280A	P59817	542 aa	Predicted RBP	11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	ANAPC15	P60006	121 aa		11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	RBM26	Q5T8P6	1007 aa	Known RBP	11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	SAMD7	Q7Z3H4	446 aa		11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	PI4K2B	Q8TCG2	481 aa		11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	EDC3	Q96F86	508 aa	Known RBP	11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	ANTXR1	Q9H6X2	564 aa		11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	ADARB2	Q9NS39	739 aa	Known RBP	11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	PAG1	Q9NWQ8	432 aa		11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	RAI14	Q9P0K7	980 aa		11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	SUGT1	Q9Y2Z0	365 aa		11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	MYH13	Q9UKX3	1938 aa		11.36	□□□□□ -0.59
NXF1-209	ENST00000531474	MAST3	O60307	1309 aa		11.35	□□□□□ -0.59
NXF1-209	ENST00000531474	POTEC	B2RU33	542 aa		11.35	□□□□□ -0.59
NXF1-209	ENST00000531474	IDH1	O75874	414 aa	Known RBP	11.35	□□□□□ -0.59
NXF1-209	ENST00000531474	MCM2	P49736	904 aa		11.35	□□□□□ -0.59
NXF1-209	ENST00000531474	RBM5	P52756	815 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
NXF1-209	ENST00000531474	TTF1	Q15361	905 aa	Predicted RBP	11.35	□□□□□ -0.59
NXF1-209	ENST00000531474	KIF4B	Q2VIQ3	1234 aa		11.35	□□□□□ -0.59
NXF1-209	ENST00000531474	EAPP	Q56P03	285 aa	Predicted RBP	11.35	□□□□□ -0.59
NXF1-209	ENST00000531474	TRPM4	Q8TD43	1214 aa		11.35	□□□□□ -0.59
NXF1-209	ENST00000531474	ESYT1	Q9BSJ8	1104 aa		11.35	□□□□□ -0.59
NXF1-209	ENST00000531474	MYOZ2	Q9NPC6	264 aa		11.35	□□□□□ -0.59
NXF1-209	ENST00000531474	ST18	O60284	1047 aa		11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	EGFR	P00533	1210 aa		11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	CRK	P46108	304 aa		11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	MECOM	Q03112	1051 aa		11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	DLGAP5	Q15398	846 aa		11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	DIXDC1	Q155Q3	683 aa		11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	CFAP100	Q494V2	611 aa		11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	TEKT1	Q969V4	418 aa		11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	EVI5L	Q96CN4	794 aa		11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	CHMP5	Q9NZZ3	219 aa		11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	SERPINA10	Q9UK55	444 aa		11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.34	□□□□□ -0.59
NXF1-209	ENST00000531474	UTRN	P46939	3433 aa		11.33	□□□□□ -0.6
NXF1-209	ENST00000531474	MMP14	P50281	582 aa		11.33	□□□□□ -0.6
NXF1-209	ENST00000531474	GSTO1	P78417	241 aa		11.33	□□□□□ -0.6
NXF1-209	ENST00000531474	HDLBP	Q00341	1268 aa	Known RBP	11.33	□□□□□ -0.6
NXF1-209	ENST00000531474	MAP3K12	Q12852	859 aa		11.33	□□□□□ -0.6
NXF1-209	ENST00000531474	NAA16	Q6N069	864 aa	Predicted RBP	11.33	□□□□□ -0.6
NXF1-209	ENST00000531474	KIAA1211	Q6ZU35	1233 aa		11.33	□□□□□ -0.6
NXF1-209	ENST00000531474	USP50	Q70EL3	339 aa	Predicted RBP	11.33	□□□□□ -0.6
NXF1-209	ENST00000531474	SLF2	Q8IX21	1173 aa		11.33	□□□□□ -0.6
NXF1-209	ENST00000531474	KIF2C	Q99661	725 aa		11.33	□□□□□ -0.6
NXF1-209	ENST00000531474	PCDHAC2	Q9Y5I4	1007 aa		11.33	□□□□□ -0.6
NXF1-209	ENST00000531474		K7ELQ4	463 aa	Predicted RBP	11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms