RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 ZGPATQ8N5A5 531 aaKnown RBP13.4□□□□□ -0.26
CAPN1-218ENST00000530442 PI4K2BQ8TCG2 481 aa13.4□□□□□ -0.26
CAPN1-218ENST00000530442 GPATCH3Q96I76 525 aa13.4□□□□□ -0.26
CAPN1-218ENST00000530442 BOLA2Q9H3K6 86 aa13.4□□□□□ -0.26
CAPN1-218ENST00000530442 ANTXR1Q9H6X2 564 aa13.4□□□□□ -0.26
CAPN1-218ENST00000530442 PIH1D3Q9NQM4 214 aaKnown RBP13.4□□□□□ -0.26
CAPN1-218ENST00000530442 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-218ENST00000530442 ABCF2Q9UG63 623 aa13.4□□□□□ -0.26
CAPN1-218ENST00000530442 HDAC9Q9UKV0 1011 aa13.4□□□□□ -0.26
CAPN1-218ENST00000530442 CDK5RAP2Q96SN8 1893 aa13.4□□□□□ -0.26
CAPN1-218ENST00000530442 MAST3O60307 1309 aa13.39□□□□□ -0.27
CAPN1-218ENST00000530442 LDHBP07195 334 aaKnown RBP13.39□□□□□ -0.27
CAPN1-218ENST00000530442 CFAP100Q494V2 611 aa13.39□□□□□ -0.27
CAPN1-218ENST00000530442 ERICH6BQ5W0A0 696 aa13.39□□□□□ -0.27
CAPN1-218ENST00000530442 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-218ENST00000530442 PNMA8AQ86V59 439 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-218ENST00000530442 OGFOD1Q8N543 542 aa13.39□□□□□ -0.27
CAPN1-218ENST00000530442 ZNF384Q8TF68 577 aa13.39□□□□□ -0.27
CAPN1-218ENST00000530442 EDC3Q96F86 508 aaKnown RBP13.39□□□□□ -0.27
CAPN1-218ENST00000530442 ZBED3Q96IU2 234 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-218ENST00000530442 DNAJC2Q99543 621 aaKnown RBP13.39□□□□□ -0.27
CAPN1-218ENST00000530442 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-218ENST00000530442 AOX1Q06278 1338 aa13.39□□□□□ -0.27
CAPN1-218ENST00000530442 WNT10BO00744 389 aa13.38□□□□□ -0.27
CAPN1-218ENST00000530442 PDE4AP27815 886 aa13.38□□□□□ -0.27
CAPN1-218ENST00000530442 CRKP46108 304 aa13.38□□□□□ -0.27
CAPN1-218ENST00000530442 MMP14P50281 582 aa13.38□□□□□ -0.27
CAPN1-218ENST00000530442 DIXDC1Q155Q3 683 aa13.38□□□□□ -0.27
CAPN1-218ENST00000530442 RBM26Q5T8P6 1007 aaKnown RBP13.38□□□□□ -0.27
CAPN1-218ENST00000530442 LDHDQ86WU2 507 aa13.38□□□□□ -0.27
CAPN1-218ENST00000530442 MTMR14Q8NCE2 650 aa13.38□□□□□ -0.27
CAPN1-218ENST00000530442 CCDC136Q96JN2 1154 aa13.38□□□□□ -0.27
CAPN1-218ENST00000530442 HAUS7Q99871 368 aa13.38□□□□□ -0.27
CAPN1-218ENST00000530442 SERPINA10Q9UK55 444 aa13.38□□□□□ -0.27
CAPN1-218ENST00000530442 FOCADQ5VW36 1801 aa13.38□□□□□ -0.27
CAPN1-218ENST00000530442 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
CAPN1-218ENST00000530442 GOLIM4O00461 696 aa13.37□□□□□ -0.27
CAPN1-218ENST00000530442 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
CAPN1-218ENST00000530442 PDE1AP54750 535 aa13.37□□□□□ -0.27
CAPN1-218ENST00000530442 MECOMQ03112 1051 aa13.37□□□□□ -0.27
CAPN1-218ENST00000530442 NBPF9Q3BBW0 867 aa13.37□□□□□ -0.27
CAPN1-218ENST00000530442 ERICH6Q7L0X2 663 aa13.37□□□□□ -0.27
CAPN1-218ENST00000530442 DZIP1Q86YF9 867 aaKnown RBP13.37□□□□□ -0.27
CAPN1-218ENST00000530442 TEKT1Q969V4 418 aa13.37□□□□□ -0.27
CAPN1-218ENST00000530442 NSUN4Q96CB9 384 aaKnown RBP13.37□□□□□ -0.27
CAPN1-218ENST00000530442 PAG1Q9NWQ8 432 aa13.37□□□□□ -0.27
CAPN1-218ENST00000530442 STAP2Q9UGK3 403 aa13.37□□□□□ -0.27
CAPN1-218ENST00000530442 GAKO14976 1311 aa13.37□□□□□ -0.27
CAPN1-218ENST00000530442 GLRX3O76003 335 aaKnown RBP13.36□□□□□ -0.27
CAPN1-218ENST00000530442 HDLBPQ00341 1268 aaKnown RBP13.36□□□□□ -0.27
CAPN1-218ENST00000530442 SPTY2D1Q68D10 685 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-218ENST00000530442 PLEKHM2Q8IWE5 1019 aa13.36□□□□□ -0.27
CAPN1-218ENST00000530442 PPP4R2Q9NY27 417 aa13.36□□□□□ -0.27
CAPN1-218ENST00000530442 GGA3Q9NZ52 723 aa13.36□□□□□ -0.27
CAPN1-218ENST00000530442 RAI14Q9P0K7 980 aa13.36□□□□□ -0.27
CAPN1-218ENST00000530442 LRP2BPQ9P2M1 347 aa13.36□□□□□ -0.27
CAPN1-218ENST00000530442 DAGLAQ9Y4D2 1042 aa13.36□□□□□ -0.27
CAPN1-218ENST00000530442 MROH7-TTC4A0A0A0MT08 1334 aa13.36□□□□□ -0.27
CAPN1-218ENST00000530442 TRPM7Q96QT4 1865 aa13.36□□□□□ -0.27
CAPN1-218ENST00000530442 ERC2O15083 957 aa13.35□□□□□ -0.27
CAPN1-218ENST00000530442 IDH1O75874 414 aaKnown RBP13.35□□□□□ -0.27
CAPN1-218ENST00000530442 TOMM70O94826 608 aa13.35□□□□□ -0.27
CAPN1-218ENST00000530442 RBM5P52756 815 aaKnown RBP eCLIP13.35□□□□□ -0.27
CAPN1-218ENST00000530442 TTF1Q15361 905 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-218ENST00000530442 DLGAP5Q15398 846 aa13.35□□□□□ -0.27
CAPN1-218ENST00000530442 HHIPL2Q6UWX4 724 aa13.35□□□□□ -0.27
CAPN1-218ENST00000530442 RBM46Q8TBY0 533 aaKnown RBP13.35□□□□□ -0.27
CAPN1-218ENST00000530442 PRMT6Q96LA8 375 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-218ENST00000530442 ZDHHC15Q96MV8 337 aa13.35□□□□□ -0.27
CAPN1-218ENST00000530442 MRIQ9BWK5 157 aa13.35□□□□□ -0.27
CAPN1-218ENST00000530442 PGAP2Q9UHJ9 254 aa13.35□□□□□ -0.27
CAPN1-218ENST00000530442 RFX7Q2KHR2 1363 aa13.34□□□□□ -0.27
CAPN1-218ENST00000530442 DDX60LQ5H9U9 1706 aaKnown RBP13.34□□□□□ -0.27
CAPN1-218ENST00000530442 MAP4K4O95819 1239 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-218ENST00000530442 ANGEL2Q5VTE6 544 aaKnown RBP13.34□□□□□ -0.27
CAPN1-218ENST00000530442 MAP1SQ66K74 1059 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-218ENST00000530442 APOBEC3HQ6NTF7 200 aaKnown RBP13.34□□□□□ -0.27
CAPN1-218ENST00000530442 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
CAPN1-218ENST00000530442 ADGRA1Q86SQ6 560 aa13.34□□□□□ -0.27
CAPN1-218ENST00000530442 SKAP1Q86WV1 359 aa13.34□□□□□ -0.27
CAPN1-218ENST00000530442 ZC3H15Q8WU90 426 aaKnown RBP13.34□□□□□ -0.27
CAPN1-218ENST00000530442 OSBPL3Q9H4L5 887 aa13.34□□□□□ -0.27
CAPN1-218ENST00000530442 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
CAPN1-218ENST00000530442 PITPNM2Q9BZ72 1349 aa13.34□□□□□ -0.27
CAPN1-218ENST00000530442 NAV1Q8NEY1 1877 aa13.33□□□□□ -0.27
CAPN1-218ENST00000530442 CLRN2A0PK11 232 aa13.33□□□□□ -0.28
CAPN1-218ENST00000530442 IGSF3O75054 1194 aa13.33□□□□□ -0.28
CAPN1-218ENST00000530442 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
CAPN1-218ENST00000530442 NAA16Q6N069 864 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-218ENST00000530442 MAGEB6Q8N7X4 407 aa13.33□□□□□ -0.28
CAPN1-218ENST00000530442 SMC1BQ8NDV3 1235 aa13.33□□□□□ -0.28
CAPN1-218ENST00000530442 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-218ENST00000530442 SCAF8Q9UPN6 1271 aaKnown RBP13.33□□□□□ -0.28
CAPN1-218ENST00000530442 ADM5C9JUS6 153 aa13.32□□□□□ -0.28
CAPN1-218ENST00000530442 CHGBP05060 677 aa13.32□□□□□ -0.28
CAPN1-218ENST00000530442 PDE6AP16499 860 aa13.32□□□□□ -0.28
CAPN1-218ENST00000530442 BTDP43251 543 aa13.32□□□□□ -0.28
CAPN1-218ENST00000530442 GSTO1P78417 241 aa13.32□□□□□ -0.28
CAPN1-218ENST00000530442 MAP3K12Q12852 859 aa13.32□□□□□ -0.28
CAPN1-218ENST00000530442 SLF2Q8IX21 1173 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms