RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, human

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF12-208	ENST00000529970	PRAMEF18	Q5VWM3	479 aa		5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PLBD2	Q8NHP8	589 aa		5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	SH3TC2	Q8TF17	1288 aa		5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	XAGE3	Q8WTP9	111 aa		5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	CELF1	Q92879	486 aa	Known RBP	5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	GML	Q99445	158 aa		5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	COL25A1	Q9BXS0	654 aa	Predicted RBP	5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	R3HDML	Q9H3Y0	253 aa		5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	VEZT	Q9HBM0	779 aa		5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	RBBP6	Q7Z6E9	1792 aa	Known RBP	5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	MED23	Q9ULK4	1368 aa		5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PER1	O15534	1290 aa	Predicted RBP	5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	RBM5	P52756	815 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	SNAPC2	Q13487	334 aa		5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	SRRD	Q9UH36	339 aa		5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	LEMD3	Q9Y2U8	911 aa		5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	LAS1L	Q9Y4W2	734 aa	Known RBP	5.2	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PDE4A	P27815	886 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PPP2R1A	P30153	589 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	IGHMBP2	P38935	993 aa	Known RBP	5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	LACTB	P83111	547 aa	Predicted RBP	5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	CCDC97	Q96F63	343 aa	Predicted RBP	5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	LBHD1	Q9BQE6	289 aa	Predicted RBP	5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	UBE2O	Q9C0C9	1292 aa	Known RBP	5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	MYPN	Q86TC9	1320 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	DDX58	O95786	925 aa	Known RBP	5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	LRIT3	Q3SXY7	679 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	DCAF15	Q66K64	600 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	TTLL5	Q6EMB2	1281 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	ANKLE1	Q8NAG6	615 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	OPTN	Q96CV9	577 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	ELP3	Q9H9T3	547 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	WTIP	A6NIX2	430 aa	Predicted RBP	5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	TLR2	O60603	784 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PDE8A	O60658	829 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	MAP3K9	P80192	1104 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	ZNF697	Q5TEC3	545 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	FAM109B	Q6ICB4	259 aa	Predicted RBP	5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PHACTR3	Q96KR7	559 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	RIPOR2	Q9Y4F9	1068 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	IRS2	Q9Y4H2	1338 aa		5.19	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PSMC4	P43686	418 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	RGS3	P49796	1198 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	DACT2	Q5SW24	774 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	RIC3	Q7Z5B4	369 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	TDH	Q8IZJ6	230 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	U2AF1L4	Q8WU68	220 aa	Known RBP	5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PARK7	Q99497	189 aa	Known RBP	5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	HYPK	Q9NX55	129 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	MTMR10	Q9NXD2	777 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	DCTN1	Q14203	1278 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	KIAA0825	Q8IV33	1275 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	MTMR14	Q8NCE2	650 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	KCNQ5	Q9NR82	932 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	MIS18A	Q9NYP9	233 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	STAP2	Q9UGK3	403 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	LAMB4	A4D0S4	1761 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	SGPL1	O95470	568 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	TRIM28	Q13263	835 aa	Known RBP	5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	NFE2L2	Q16236	605 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	ZNF804A	Q7Z570	1209 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	SKAP1	Q86WV1	359 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	ERO1B	Q86YB8	467 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	FAM89A	Q96GI7	184 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	LRCH3	Q96II8	777 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	THUMPD2	Q9BTF0	503 aa	Known RBP	5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PRKAG2	Q9UGJ0	569 aa		5.18	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	APAF1	O14727	1248 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	C7orf61	Q8IZ16	206 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	CLMN	Q96JQ2	1002 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PRO3102	Q9H379	93 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	DBF4	Q9UBU7	674 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	HOXB7	P09629	217 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	COL9A1	P20849	921 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	NOL8	Q76FK4	1167 aa	Known RBP	5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	COA7	Q96BR5	231 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	MPHOSPH8	Q99549	860 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	NBPF3	Q9H094	633 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	SIPA1L3	O60292	1781 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	FKBP1A	P62942	108 aa	Known RBP	5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PDE4D	Q08499	809 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	NEXN	Q0ZGT2	675 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	C20orf194	Q5TEA3	1177 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	HDGFL1	Q5TGJ6	251 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	BRI3BP	Q8WY22	251 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	ISCA1	Q9BUE6	129 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	CWC25	Q9NXE8	425 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	KCNH4	Q9UQ05	1017 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	TRIOBP	Q9H2D6	2365 aa		5.17	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	ADCY3	O60266	1144 aa		5.16	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	CCT4	P50991	539 aa	Known RBP	5.16	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	GTF2I	P78347	998 aa		5.16	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	PPIL2	Q13356	520 aa		5.16	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	RASA3	Q14644	834 aa		5.16	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	CFAP100	Q494V2	611 aa		5.16	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	CCDC191	Q8NCU4	936 aa		5.16	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	KIAA0100	Q14667	2235 aa	Known RBP	5.16	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	ADGRA2	Q96PE1	1338 aa		5.16	□□□□□ -1.58
ARHGEF12-208	ENST00000529970	SPDYE5	A6NIY4	337 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms