RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, human

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1CA-206	ENST00000529724	BSDC1	Q9NW68	430 aa	Predicted RBP	13.69	□□□□□ -0.22
PPP1CA-206	ENST00000529724	GABRQ	Q9UN88	632 aa		13.69	□□□□□ -0.22
PPP1CA-206	ENST00000529724	SNCAIP	Q9Y6H5	919 aa		13.69	□□□□□ -0.22
PPP1CA-206	ENST00000529724	CDH23	Q9H251	3354 aa		13.69	□□□□□ -0.22
PPP1CA-206	ENST00000529724	IRF6	O14896	467 aa		13.68	□□□□□ -0.22
PPP1CA-206	ENST00000529724	HSP90B1	P14625	803 aa	Known RBP	13.68	□□□□□ -0.22
PPP1CA-206	ENST00000529724	CSAD	Q9Y600	493 aa		13.68	□□□□□ -0.22
PPP1CA-206	ENST00000529724	NCOR1	O75376	2440 aa		13.68	□□□□□ -0.22
PPP1CA-206	ENST00000529724		F8W031	263 aa	Predicted RBP	13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	ADCY3	O60266	1144 aa		13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	INHA	P05111	366 aa		13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	PCCA	P05165	728 aa	Predicted RBP	13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	ELN	P15502	786 aa		13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	SNAPC2	Q13487	334 aa		13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	MAFA	Q8NHW3	353 aa	Predicted RBP	13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	FAM122A	Q96E09	287 aa		13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	CDC5L	Q99459	802 aa	Known RBP	13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	BABAM1	Q9NWV8	329 aa		13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	LEMD3	Q9Y2U8	911 aa		13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	SPEF2	Q9C093	1822 aa		13.67	□□□□□ -0.22
PPP1CA-206	ENST00000529724	FAM205A	Q6ZU69	1335 aa		13.66	□□□□□ -0.22
PPP1CA-206	ENST00000529724	PPP2R1A	P30153	589 aa		13.66	□□□□□ -0.22
PPP1CA-206	ENST00000529724	SPDYE2	Q495Y8	402 aa		13.66	□□□□□ -0.22
PPP1CA-206	ENST00000529724	ERO1B	Q86YB8	467 aa		13.66	□□□□□ -0.22
PPP1CA-206	ENST00000529724	SYMPK	Q92797	1274 aa	Known RBP	13.66	□□□□□ -0.22
PPP1CA-206	ENST00000529724	CD209	Q9NNX6	404 aa		13.66	□□□□□ -0.22
PPP1CA-206	ENST00000529724	PIEZO1	Q92508	2521 aa		13.65	□□□□□ -0.22
PPP1CA-206	ENST00000529724	BCR	P11274	1271 aa		13.65	□□□□□ -0.22
PPP1CA-206	ENST00000529724	PPIL2	Q13356	520 aa		13.65	□□□□□ -0.22
PPP1CA-206	ENST00000529724	ANKRD23	Q86SG2	305 aa		13.65	□□□□□ -0.22
PPP1CA-206	ENST00000529724	CDX2	Q99626	313 aa	Predicted RBP	13.65	□□□□□ -0.22
PPP1CA-206	ENST00000529724	ZNF70	Q9UC06	446 aa	Predicted RBP	13.65	□□□□□ -0.22
PPP1CA-206	ENST00000529724	ARAP2	Q8WZ64	1704 aa		13.64	□□□□□ -0.23
PPP1CA-206	ENST00000529724	MGAM	O43451	1857 aa		13.64	□□□□□ -0.23
PPP1CA-206	ENST00000529724	TNFRSF10A	O00220	468 aa		13.64	□□□□□ -0.23
PPP1CA-206	ENST00000529724	NEFM	P07197	916 aa		13.64	□□□□□ -0.23
PPP1CA-206	ENST00000529724	FCGRT	P55899	365 aa		13.64	□□□□□ -0.23
PPP1CA-206	ENST00000529724	CTSW	P56202	376 aa		13.64	□□□□□ -0.23
PPP1CA-206	ENST00000529724	TNFAIP1	Q13829	316 aa		13.64	□□□□□ -0.23
PPP1CA-206	ENST00000529724	ANKLE1	Q8NAG6	615 aa		13.64	□□□□□ -0.23
PPP1CA-206	ENST00000529724	PXYLP1	Q8TE99	480 aa		13.64	□□□□□ -0.23
PPP1CA-206	ENST00000529724	TMEM39B	Q9GZU3	492 aa		13.64	□□□□□ -0.23
PPP1CA-206	ENST00000529724	GREM2	Q9H772	168 aa		13.64	□□□□□ -0.23
PPP1CA-206	ENST00000529724	PDHX	O00330	501 aa		13.63	□□□□□ -0.23
PPP1CA-206	ENST00000529724	FLT3LG	P49771	235 aa		13.63	□□□□□ -0.23
PPP1CA-206	ENST00000529724	MOGS	Q13724	837 aa		13.63	□□□□□ -0.23
PPP1CA-206	ENST00000529724	HDGFL1	Q5TGJ6	251 aa		13.63	□□□□□ -0.23
PPP1CA-206	ENST00000529724	CCDC191	Q8NCU4	936 aa		13.63	□□□□□ -0.23
PPP1CA-206	ENST00000529724	TTLL11	Q8NHH1	800 aa		13.63	□□□□□ -0.23
PPP1CA-206	ENST00000529724	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.63	□□□□□ -0.23
PPP1CA-206	ENST00000529724	DBF4	Q9UBU7	674 aa	Predicted RBP	13.63	□□□□□ -0.23
PPP1CA-206	ENST00000529724	FKBP1A	P62942	108 aa	Known RBP	13.62	□□□□□ -0.23
PPP1CA-206	ENST00000529724	IRF5	Q13568	498 aa		13.62	□□□□□ -0.23
PPP1CA-206	ENST00000529724	ZNF697	Q5TEC3	545 aa		13.62	□□□□□ -0.23
PPP1CA-206	ENST00000529724	MYD88	Q99836	296 aa		13.62	□□□□□ -0.23
PPP1CA-206	ENST00000529724	NBPF3	Q9H094	633 aa		13.62	□□□□□ -0.23
PPP1CA-206	ENST00000529724	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
PPP1CA-206	ENST00000529724	TDRD3	Q9H7E2	651 aa	Known RBP	13.62	□□□□□ -0.23
PPP1CA-206	ENST00000529724	TCP10L2	B9ZVM9	353 aa		13.61	□□□□□ -0.23
PPP1CA-206	ENST00000529724	RBM5	P52756	815 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
PPP1CA-206	ENST00000529724	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.61	□□□□□ -0.23
PPP1CA-206	ENST00000529724	WRNIP1	Q96S55	665 aa		13.61	□□□□□ -0.23
PPP1CA-206	ENST00000529724	HYPK	Q9NX55	129 aa		13.61	□□□□□ -0.23
PPP1CA-206	ENST00000529724	BDP1	A6H8Y1	2624 aa		13.61	□□□□□ -0.23
PPP1CA-206	ENST00000529724	SNAP23	O00161	211 aa		13.6	□□□□□ -0.23
PPP1CA-206	ENST00000529724	DDX60L	Q5H9U9	1706 aa	Known RBP	13.6	□□□□□ -0.23
PPP1CA-206	ENST00000529724	RIC3	Q7Z5B4	369 aa		13.6	□□□□□ -0.23
PPP1CA-206	ENST00000529724	C11orf49	Q9H6J7	331 aa		13.6	□□□□□ -0.23
PPP1CA-206	ENST00000529724	CWC25	Q9NXE8	425 aa	Predicted RBP	13.6	□□□□□ -0.23
PPP1CA-206	ENST00000529724	KCNH4	Q9UQ05	1017 aa		13.6	□□□□□ -0.23
PPP1CA-206	ENST00000529724	JAG2	Q9Y219	1238 aa		13.6	□□□□□ -0.23
PPP1CA-206	ENST00000529724	PFAS	O15067	1338 aa		13.6	□□□□□ -0.23
PPP1CA-206	ENST00000529724	TMEM265	A0A087WTH1	108 aa		13.59	□□□□□ -0.23
PPP1CA-206	ENST00000529724	CYP2C8	P10632	490 aa		13.59	□□□□□ -0.23
PPP1CA-206	ENST00000529724	IL1R1	P14778	569 aa		13.59	□□□□□ -0.23
PPP1CA-206	ENST00000529724	MDM2	Q00987	491 aa	Predicted RBP	13.59	□□□□□ -0.23
PPP1CA-206	ENST00000529724	PPAT	Q06203	517 aa		13.59	□□□□□ -0.23
PPP1CA-206	ENST00000529724	TJAP1	Q5JTD0	557 aa		13.59	□□□□□ -0.23
PPP1CA-206	ENST00000529724	C15orf52	Q6ZUT6	534 aa	Known RBP	13.59	□□□□□ -0.23
PPP1CA-206	ENST00000529724	MYLIP	Q8WY64	445 aa		13.59	□□□□□ -0.23
PPP1CA-206	ENST00000529724	ANKRD2	Q9GZV1	360 aa		13.59	□□□□□ -0.23
PPP1CA-206	ENST00000529724	DOCK3	Q8IZD9	2030 aa		13.58	□□□□□ -0.24
PPP1CA-206	ENST00000529724	CHL1	O00533	1208 aa		13.58	□□□□□ -0.24
PPP1CA-206	ENST00000529724	HOXB7	P09629	217 aa		13.58	□□□□□ -0.24
PPP1CA-206	ENST00000529724	GOLGA2	Q08379	1002 aa		13.58	□□□□□ -0.24
PPP1CA-206	ENST00000529724	MAP3K12	Q12852	859 aa		13.58	□□□□□ -0.24
PPP1CA-206	ENST00000529724	DZIP1L	Q8IYY4	767 aa	Known RBP	13.58	□□□□□ -0.24
PPP1CA-206	ENST00000529724	PARK7	Q99497	189 aa	Known RBP	13.58	□□□□□ -0.24
PPP1CA-206	ENST00000529724	SEMA6B	Q9H3T3	888 aa		13.58	□□□□□ -0.24
PPP1CA-206	ENST00000529724	SERPINA10	Q9UK55	444 aa		13.58	□□□□□ -0.24
PPP1CA-206	ENST00000529724	MYH3	P11055	1940 aa		13.57	□□□□□ -0.24
PPP1CA-206	ENST00000529724	IGHMBP2	P38935	993 aa	Known RBP	13.57	□□□□□ -0.24
PPP1CA-206	ENST00000529724	RIPK4	P57078	832 aa		13.57	□□□□□ -0.24
PPP1CA-206	ENST00000529724	GPAT2	Q6NUI2	795 aa		13.57	□□□□□ -0.24
PPP1CA-206	ENST00000529724	TTYH1	Q9H313	450 aa	Predicted RBP	13.57	□□□□□ -0.24
PPP1CA-206	ENST00000529724	PHAX	Q9H814	394 aa	Known RBP	13.57	□□□□□ -0.24
PPP1CA-206	ENST00000529724	MAPK8IP3	Q9UPT6	1336 aa		13.57	□□□□□ -0.24
PPP1CA-206	ENST00000529724	KCNJ4	P48050	445 aa		13.56	□□□□□ -0.24
PPP1CA-206	ENST00000529724	TNNI2	P48788	182 aa		13.56	□□□□□ -0.24
PPP1CA-206	ENST00000529724	CHRND	Q07001	517 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms