RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 UBXN2AP68543 259 aa18.06■□□□□ 0.48
TRIM3-208ENST00000529058 CHRNDQ07001 517 aa18.06■□□□□ 0.48
TRIM3-208ENST00000529058 C17orf99Q6UX52 265 aa18.06■□□□□ 0.48
TRIM3-208ENST00000529058 DEFB123Q8N688 67 aa18.06■□□□□ 0.48
TRIM3-208ENST00000529058 U2AF1L4Q8WU68 220 aaKnown RBP18.06■□□□□ 0.48
TRIM3-208ENST00000529058 COL25A1Q9BXS0 654 aaPredicted RBP18.06■□□□□ 0.48
TRIM3-208ENST00000529058 STXBP5LQ9Y2K9 1186 aa18.06■□□□□ 0.48
TRIM3-208ENST00000529058 ALPK3Q96L96 1907 aa18.06■□□□□ 0.48
TRIM3-208ENST00000529058 MYPNQ86TC9 1320 aa18.05■□□□□ 0.48
TRIM3-208ENST00000529058 IGKV5-2P06315 115 aa18.05■□□□□ 0.48
TRIM3-208ENST00000529058 ITGA6P23229 1130 aa18.05■□□□□ 0.48
TRIM3-208ENST00000529058 C15orf52Q6ZUT6 534 aaKnown RBP18.05■□□□□ 0.48
TRIM3-208ENST00000529058 MBIPQ9NS73 344 aa18.05■□□□□ 0.48
TRIM3-208ENST00000529058 BIN2Q9UBW5 565 aaPredicted RBP18.05■□□□□ 0.48
TRIM3-208ENST00000529058 MAP3K2Q9Y2U5 619 aa18.05■□□□□ 0.48
TRIM3-208ENST00000529058 MGAMO43451 1857 aa18.04■□□□□ 0.48
TRIM3-208ENST00000529058 SNAP23O00161 211 aa18.04■□□□□ 0.48
TRIM3-208ENST00000529058 FMNL1O95466 1100 aaPredicted RBP18.04■□□□□ 0.48
TRIM3-208ENST00000529058 SNAPC2Q13487 334 aa18.04■□□□□ 0.48
TRIM3-208ENST00000529058 ZNF804AQ7Z570 1209 aa18.04■□□□□ 0.48
TRIM3-208ENST00000529058 ERO1BQ86YB8 467 aa18.04■□□□□ 0.48
TRIM3-208ENST00000529058 CCDC146Q8IYE0 955 aa18.04■□□□□ 0.48
TRIM3-208ENST00000529058 TMEM39BQ9GZU3 492 aa18.04■□□□□ 0.48
TRIM3-208ENST00000529058 TDRD3Q9H7E2 651 aaKnown RBP18.04■□□□□ 0.48
TRIM3-208ENST00000529058 CPA4Q9UI42 421 aa18.04■□□□□ 0.48
TRIM3-208ENST00000529058 JAG2Q9Y219 1238 aa18.04■□□□□ 0.48
TRIM3-208ENST00000529058 TCP10L2B9ZVM9 353 aa18.03■□□□□ 0.48
TRIM3-208ENST00000529058 IRF6O14896 467 aa18.03■□□□□ 0.48
TRIM3-208ENST00000529058 SGPL1O95470 568 aa18.03■□□□□ 0.48
TRIM3-208ENST00000529058 Q7L0L9 218 aa18.03■□□□□ 0.48
TRIM3-208ENST00000529058 SNCAIPQ9Y6H5 919 aa18.03■□□□□ 0.48
TRIM3-208ENST00000529058 ELL2O00472 640 aaPredicted RBP18.02■□□□□ 0.48
TRIM3-208ENST00000529058 TAF5LO75529 589 aa18.02■□□□□ 0.48
TRIM3-208ENST00000529058 BMP8BP34820 402 aa18.02■□□□□ 0.48
TRIM3-208ENST00000529058 TNNI2P48788 182 aa18.02■□□□□ 0.48
TRIM3-208ENST00000529058 UBE3BQ7Z3V4 1068 aa18.02■□□□□ 0.48
TRIM3-208ENST00000529058 UNC93B1Q9H1C4 597 aa18.02■□□□□ 0.48
TRIM3-208ENST00000529058 SERPINA10Q9UK55 444 aa18.02■□□□□ 0.48
TRIM3-208ENST00000529058 H7C1W4 665 aa18.01■□□□□ 0.47
TRIM3-208ENST00000529058 NEXNQ0ZGT2 675 aa18.01■□□□□ 0.47
TRIM3-208ENST00000529058 PPIL2Q13356 520 aa18.01■□□□□ 0.47
TRIM3-208ENST00000529058 CWF19L2Q2TBE0 894 aaKnown RBP18.01■□□□□ 0.47
TRIM3-208ENST00000529058 KSR2Q6VAB6 950 aa18.01■□□□□ 0.47
TRIM3-208ENST00000529058 SLAIN1Q8ND83 568 aa18.01■□□□□ 0.47
TRIM3-208ENST00000529058 MTMR10Q9NXD2 777 aa18.01■□□□□ 0.47
TRIM3-208ENST00000529058 PI4KAP2A4QPH2 592 aa18■□□□□ 0.47
TRIM3-208ENST00000529058 CAPN2P17655 700 aa18■□□□□ 0.47
TRIM3-208ENST00000529058 PRKCZQ05513 592 aa18■□□□□ 0.47
TRIM3-208ENST00000529058 DZIP1LQ8IYY4 767 aaKnown RBP18■□□□□ 0.47
TRIM3-208ENST00000529058 PI4KAP1Q8N8J0 262 aa18■□□□□ 0.47
TRIM3-208ENST00000529058 WRNIP1Q96S55 665 aa18■□□□□ 0.47
TRIM3-208ENST00000529058 GDF15Q99988 308 aa18■□□□□ 0.47
TRIM3-208ENST00000529058 PLA2G12BQ9BX93 195 aa18■□□□□ 0.47
TRIM3-208ENST00000529058 TTF2Q9UNY4 1162 aaKnown RBP18■□□□□ 0.47
TRIM3-208ENST00000529058 ADGRA2Q96PE1 1338 aa17.99■□□□□ 0.47
TRIM3-208ENST00000529058 NEURL1BA8MQ27 555 aa17.99■□□□□ 0.47
TRIM3-208ENST00000529058 ZKSCAN4Q969J2 545 aaPredicted RBP17.99■□□□□ 0.47
TRIM3-208ENST00000529058 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
TRIM3-208ENST00000529058 TFRCP02786 760 aaKnown RBP17.98■□□□□ 0.47
TRIM3-208ENST00000529058 CSF1RP07333 972 aa17.98■□□□□ 0.47
TRIM3-208ENST00000529058 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
TRIM3-208ENST00000529058 LRIT3Q3SXY7 679 aa17.98■□□□□ 0.47
TRIM3-208ENST00000529058 MFSD14BQ5SR56 506 aa17.98■□□□□ 0.47
TRIM3-208ENST00000529058 CCDC30Q5VVM6 783 aa17.98■□□□□ 0.47
TRIM3-208ENST00000529058 ANKRD23Q86SG2 305 aa17.98■□□□□ 0.47
TRIM3-208ENST00000529058 FAM205AQ6ZU69 1335 aa17.98■□□□□ 0.47
TRIM3-208ENST00000529058 VCANP13611 3396 aa17.97■□□□□ 0.47
TRIM3-208ENST00000529058 ANKRD18BA2A2Z9 1011 aa17.97■□□□□ 0.47
TRIM3-208ENST00000529058 PDHXO00330 501 aa17.97■□□□□ 0.47
TRIM3-208ENST00000529058 FCGRTP55899 365 aa17.97■□□□□ 0.47
TRIM3-208ENST00000529058 PPATQ06203 517 aa17.97■□□□□ 0.47
TRIM3-208ENST00000529058 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRIM3-208ENST00000529058 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.97■□□□□ 0.47
TRIM3-208ENST00000529058 CHMP4AQ9BY43 222 aa17.97■□□□□ 0.47
TRIM3-208ENST00000529058 CRKP46108 304 aa17.96■□□□□ 0.47
TRIM3-208ENST00000529058 GABRQQ9UN88 632 aa17.96■□□□□ 0.47
TRIM3-208ENST00000529058 ADCY3O60266 1144 aa17.95■□□□□ 0.46
TRIM3-208ENST00000529058 BCAMP50895 628 aa17.95■□□□□ 0.46
TRIM3-208ENST00000529058 C8orf58Q8NAV2 365 aa17.95■□□□□ 0.46
TRIM3-208ENST00000529058 PAWRQ96IZ0 340 aaKnown RBP17.95■□□□□ 0.46
TRIM3-208ENST00000529058 DEFB118Q96PH6 123 aa17.95■□□□□ 0.46
TRIM3-208ENST00000529058 INHAP05111 366 aa17.94■□□□□ 0.46
TRIM3-208ENST00000529058 BCRP11274 1271 aa17.94■□□□□ 0.46
TRIM3-208ENST00000529058 CASP7P55210 303 aa17.94■□□□□ 0.46
TRIM3-208ENST00000529058 GCKRQ14397 625 aa17.94■□□□□ 0.46
TRIM3-208ENST00000529058 NECAB2Q7Z6G3 386 aa17.94■□□□□ 0.46
TRIM3-208ENST00000529058 C7orf61Q8IZ16 206 aa17.94■□□□□ 0.46
TRIM3-208ENST00000529058 HOOK2Q96ED9 719 aa17.94■□□□□ 0.46
TRIM3-208ENST00000529058 IFT57Q9NWB7 429 aa17.94■□□□□ 0.46
TRIM3-208ENST00000529058 GNAI1P63096 354 aa17.93■□□□□ 0.46
TRIM3-208ENST00000529058 TDHQ8IZJ6 230 aa17.93■□□□□ 0.46
TRIM3-208ENST00000529058 TDRD7Q8NHU6 1098 aaKnown RBP17.93■□□□□ 0.46
TRIM3-208ENST00000529058 PARK7Q99497 189 aaKnown RBP17.93■□□□□ 0.46
TRIM3-208ENST00000529058 CRISPLD2Q9H0B8 497 aa17.93■□□□□ 0.46
TRIM3-208ENST00000529058 PAK6Q9NQU5 681 aaPredicted RBP17.93■□□□□ 0.46
TRIM3-208ENST00000529058 ZMYND8Q9ULU4 1186 aaPredicted RBP17.93■□□□□ 0.46
TRIM3-208ENST00000529058 KCNH4Q9UQ05 1017 aa17.93■□□□□ 0.46
TRIM3-208ENST00000529058 ELNP15502 786 aa17.92■□□□□ 0.46
TRIM3-208ENST00000529058 CACNB3P54284 484 aa17.92■□□□□ 0.46
TRIM3-208ENST00000529058 DCAF15Q66K64 600 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms