RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 EYA3Q99504 573 aa14.3□□□□□ -0.12
CCDC90B-210ENST00000528149 CFHR5Q9BXR6 569 aa14.3□□□□□ -0.12
CCDC90B-210ENST00000528149 COPRSQ9NQ92 184 aa14.3□□□□□ -0.12
CCDC90B-210ENST00000528149 SCAF8Q9UPN6 1271 aaKnown RBP14.3□□□□□ -0.12
CCDC90B-210ENST00000528149 PCDHAC2Q9Y5I4 1007 aa14.3□□□□□ -0.12
CCDC90B-210ENST00000528149 EYA2O00167 538 aa14.29□□□□□ -0.12
CCDC90B-210ENST00000528149 HMMRO75330 724 aa14.29□□□□□ -0.12
CCDC90B-210ENST00000528149 METTL24Q5JXM2 366 aa14.29□□□□□ -0.12
CCDC90B-210ENST00000528149 CERS5Q8N5B7 392 aa14.29□□□□□ -0.12
CCDC90B-210ENST00000528149 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
CCDC90B-210ENST00000528149 AOX1Q06278 1338 aa14.29□□□□□ -0.12
CCDC90B-210ENST00000528149 H0YGN5 161 aa14.28□□□□□ -0.12
CCDC90B-210ENST00000528149 KCNJ4P48050 445 aa14.28□□□□□ -0.12
CCDC90B-210ENST00000528149 AAMPQ13685 434 aa14.28□□□□□ -0.12
CCDC90B-210ENST00000528149 GRIK5Q16478 980 aa14.28□□□□□ -0.12
CCDC90B-210ENST00000528149 ANKRD2Q9GZV1 360 aa14.28□□□□□ -0.12
CCDC90B-210ENST00000528149 EXOC6BQ9Y2D4 811 aa14.28□□□□□ -0.12
CCDC90B-210ENST00000528149 LEMD3Q9Y2U8 911 aa14.28□□□□□ -0.12
CCDC90B-210ENST00000528149 ZNF609O15014 1411 aa14.27□□□□□ -0.12
CCDC90B-210ENST00000528149 SURF6O75683 361 aaKnown RBP14.27□□□□□ -0.13
CCDC90B-210ENST00000528149 CIAO1O76071 339 aa14.27□□□□□ -0.13
CCDC90B-210ENST00000528149 ADORA1P30542 326 aa14.27□□□□□ -0.13
CCDC90B-210ENST00000528149 SREBF2Q12772 1141 aa14.27□□□□□ -0.13
CCDC90B-210ENST00000528149 OS9Q13438 667 aaPredicted RBP14.27□□□□□ -0.13
CCDC90B-210ENST00000528149 SCARF1Q14162 830 aa14.27□□□□□ -0.13
CCDC90B-210ENST00000528149 DACT2Q5SW24 774 aa14.27□□□□□ -0.13
CCDC90B-210ENST00000528149 ARMC5Q96C12 935 aa14.27□□□□□ -0.13
CCDC90B-210ENST00000528149 CD209Q9NNX6 404 aa14.27□□□□□ -0.13
CCDC90B-210ENST00000528149 MROH5Q6ZUA9 1318 aa14.26□□□□□ -0.13
CCDC90B-210ENST00000528149 G3V3G9 751 aa14.26□□□□□ -0.13
CCDC90B-210ENST00000528149 APBB1O00213 710 aa14.26□□□□□ -0.13
CCDC90B-210ENST00000528149 VIL1P09327 827 aaKnown RBP14.26□□□□□ -0.13
CCDC90B-210ENST00000528149 GTF2IP78347 998 aa14.26□□□□□ -0.13
CCDC90B-210ENST00000528149 G3BP1Q13283 466 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCDC90B-210ENST00000528149 DCAF8Q5TAQ9 597 aa14.26□□□□□ -0.13
CCDC90B-210ENST00000528149 PRAMEF18Q5VWM3 479 aa14.26□□□□□ -0.13
CCDC90B-210ENST00000528149 CHRDL2Q6WN34 429 aa14.26□□□□□ -0.13
CCDC90B-210ENST00000528149 GMLQ99445 158 aa14.26□□□□□ -0.13
CCDC90B-210ENST00000528149 FGFR2P21802 821 aa14.25□□□□□ -0.13
CCDC90B-210ENST00000528149 IL15P40933 162 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-210ENST00000528149 RSBN1LQ6PCB5 846 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-210ENST00000528149 FAM84BQ96KN1 310 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-210ENST00000528149 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
CCDC90B-210ENST00000528149 PTPN22Q9Y2R2 807 aa14.25□□□□□ -0.13
CCDC90B-210ENST00000528149 NOP58Q9Y2X3 529 aaKnown RBP14.25□□□□□ -0.13
CCDC90B-210ENST00000528149 PITPNM2Q9BZ72 1349 aa14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 USP17L3A6NCW0 530 aa14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 USP17L4A6NCW7 530 aa14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 SASH1O94885 1247 aa14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 PDE8BO95263 885 aa14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 BCAMP50895 628 aa14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 ZNF280AP59817 542 aaPredicted RBP14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 TFCP2Q12800 502 aa14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 TTLL12Q14166 644 aaPredicted RBP14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 USP17L1Q7RTZ2 530 aa14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 COA1Q9GZY4 146 aa14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 RBM27Q9P2N5 1060 aaKnown RBP14.24□□□□□ -0.13
CCDC90B-210ENST00000528149 LAMA3Q16787 3333 aa14.23□□□□□ -0.13
CCDC90B-210ENST00000528149 F8W031 263 aaPredicted RBP14.23□□□□□ -0.13
CCDC90B-210ENST00000528149 IGHDP01880 384 aa14.23□□□□□ -0.13
CCDC90B-210ENST00000528149 HDAC1Q13547 482 aaPredicted RBP14.23□□□□□ -0.13
CCDC90B-210ENST00000528149 C15orf52Q6ZUT6 534 aaKnown RBP14.23□□□□□ -0.13
CCDC90B-210ENST00000528149 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
CCDC90B-210ENST00000528149 CEP126Q9P2H0 1117 aa14.23□□□□□ -0.13
CCDC90B-210ENST00000528149 CHAF1AQ13111 956 aaPredicted RBP14.22□□□□□ -0.13
CCDC90B-210ENST00000528149 PUM3Q15397 648 aaKnown RBP14.22□□□□□ -0.13
CCDC90B-210ENST00000528149 ATP2B3Q16720 1220 aa14.22□□□□□ -0.13
CCDC90B-210ENST00000528149 KIAA0825Q8IV33 1275 aa14.22□□□□□ -0.13
CCDC90B-210ENST00000528149 CD99L2Q8TCZ2 262 aa14.22□□□□□ -0.13
CCDC90B-210ENST00000528149 MYO5AQ9Y4I1 1855 aaKnown RBP14.22□□□□□ -0.13
CCDC90B-210ENST00000528149 ALDH1A1P00352 501 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 IL1R1P14778 569 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 PHKA1P46020 1223 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 TIMM10P62072 90 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 CAP1Q01518 475 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 UBE4AQ14139 1066 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 HSP90AB4PQ58FF6 505 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 PODNQ7Z5L7 613 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 FBXO33Q7Z6M2 555 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 ERC1Q8IUD2 1116 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 TDRD7Q8NHU6 1098 aaKnown RBP14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 RHPN1Q8TCX5 695 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 ZNF333Q96JL9 665 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 RWDD1Q9H446 243 aaPredicted RBP14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 DCTPP1Q9H773 170 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 IL1RAPL2Q9NP60 686 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 MYOZ2Q9NPC6 264 aa14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 TLR7Q9NYK1 1049 aaKnown RBP14.21□□□□□ -0.13
CCDC90B-210ENST00000528149 SMARCA5O60264 1052 aaPredicted RBP14.2□□□□□ -0.14
CCDC90B-210ENST00000528149 SLC5A1P13866 664 aa14.2□□□□□ -0.14
CCDC90B-210ENST00000528149 HIBADHP31937 336 aaKnown RBP14.2□□□□□ -0.14
CCDC90B-210ENST00000528149 NBPF9Q3BBW0 867 aa14.2□□□□□ -0.14
CCDC90B-210ENST00000528149 SPRYD7Q5W111 196 aa14.2□□□□□ -0.14
CCDC90B-210ENST00000528149 TTLL5Q6EMB2 1281 aa14.2□□□□□ -0.14
CCDC90B-210ENST00000528149 ZNF804AQ7Z570 1209 aa14.2□□□□□ -0.14
CCDC90B-210ENST00000528149 IFNL1Q8IU54 200 aa14.2□□□□□ -0.14
CCDC90B-210ENST00000528149 ERO1AQ96HE7 468 aa14.2□□□□□ -0.14
CCDC90B-210ENST00000528149 TMEM106CQ9BVX2 250 aa14.2□□□□□ -0.14
CCDC90B-210ENST00000528149 AK9Q5TCS8 1911 aa14.19□□□□□ -0.14
CCDC90B-210ENST00000528149 A0A1B0GUL7 405 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms