RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 MYO1BO43795 1136 aa10.67□□□□□ -0.7
CHD7-206ENST00000527900 CRKP46108 304 aa10.67□□□□□ -0.7
CHD7-206ENST00000527900 RARSP54136 660 aaKnown RBP10.67□□□□□ -0.7
CHD7-206ENST00000527900 SUPT20HL1Q3ZLR7 823 aa10.67□□□□□ -0.7
CHD7-206ENST00000527900 CLMNQ96JQ2 1002 aa10.67□□□□□ -0.7
CHD7-206ENST00000527900 TDRD3Q9H7E2 651 aaKnown RBP10.67□□□□□ -0.7
CHD7-206ENST00000527900 IQSEC3Q9UPP2 1182 aaPredicted RBP10.67□□□□□ -0.7
CHD7-206ENST00000527900 PPP1R12BO60237 982 aaPredicted RBP10.66□□□□□ -0.7
CHD7-206ENST00000527900 TBC1D8O95759 1140 aa10.66□□□□□ -0.7
CHD7-206ENST00000527900 DSG3P32926 999 aa10.66□□□□□ -0.7
CHD7-206ENST00000527900 PUM3Q15397 648 aaKnown RBP10.66□□□□□ -0.7
CHD7-206ENST00000527900 CAVIN4Q5BKX8 364 aa10.66□□□□□ -0.7
CHD7-206ENST00000527900 CDAN1Q8IWY9 1227 aa10.66□□□□□ -0.7
CHD7-206ENST00000527900 TBC1D22AQ8WUA7 517 aa10.66□□□□□ -0.7
CHD7-206ENST00000527900 ARHGAP45Q92619 1136 aa10.66□□□□□ -0.7
CHD7-206ENST00000527900 SLC10A4Q96EP9 437 aa10.66□□□□□ -0.7
CHD7-206ENST00000527900 R3HDMLQ9H3Y0 253 aa10.66□□□□□ -0.7
CHD7-206ENST00000527900 FBXO3Q9UK99 471 aa10.66□□□□□ -0.7
CHD7-206ENST00000527900 OTOFQ9HC10 1997 aa10.66□□□□□ -0.7
CHD7-206ENST00000527900 GPR25O00155 361 aa10.65□□□□□ -0.7
CHD7-206ENST00000527900 TNRC18O15417 2968 aaPredicted RBP10.65□□□□□ -0.7
CHD7-206ENST00000527900 CIAO1O76071 339 aa10.65□□□□□ -0.7
CHD7-206ENST00000527900 ZBTB48P10074 688 aaPredicted RBP10.65□□□□□ -0.7
CHD7-206ENST00000527900 GJA5P36382 358 aa10.65□□□□□ -0.7
CHD7-206ENST00000527900 RBM5P52756 815 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHD7-206ENST00000527900 INHBEP58166 350 aa10.65□□□□□ -0.7
CHD7-206ENST00000527900 SREBF2Q12772 1141 aa10.65□□□□□ -0.7
CHD7-206ENST00000527900 MKRN3Q13064 507 aaKnown RBP10.65□□□□□ -0.7
CHD7-206ENST00000527900 INTS3Q68E01 1043 aaKnown RBP10.65□□□□□ -0.7
CHD7-206ENST00000527900 APOBEC3HQ6NTF7 200 aaKnown RBP10.65□□□□□ -0.7
CHD7-206ENST00000527900 CTU1Q7Z7A3 348 aaKnown RBP10.65□□□□□ -0.7
CHD7-206ENST00000527900 ZNF296Q8WUU4 475 aaPredicted RBP10.65□□□□□ -0.7
CHD7-206ENST00000527900 LPIN2Q92539 896 aa10.65□□□□□ -0.7
CHD7-206ENST00000527900 WNK4Q96J92 1243 aa10.65□□□□□ -0.7
CHD7-206ENST00000527900 ZDHHC15Q96MV8 337 aa10.65□□□□□ -0.7
CHD7-206ENST00000527900 API5Q9BZZ5 524 aaKnown RBP10.65□□□□□ -0.7
CHD7-206ENST00000527900 VEZTQ9HBM0 779 aa10.65□□□□□ -0.7
CHD7-206ENST00000527900 SUGT1Q9Y2Z0 365 aa10.65□□□□□ -0.7
CHD7-206ENST00000527900 MYH13Q9UKX3 1938 aa10.64□□□□□ -0.71
CHD7-206ENST00000527900 HTTP42858 3142 aa10.64□□□□□ -0.71
CHD7-206ENST00000527900 TESPA1A2RU30 521 aaPredicted RBP10.64□□□□□ -0.71
CHD7-206ENST00000527900 MANSC4A6NHS7 340 aaPredicted RBP10.64□□□□□ -0.71
CHD7-206ENST00000527900 IFIT1P09914 478 aaKnown RBP10.64□□□□□ -0.71
CHD7-206ENST00000527900 UBTFL1P0CB47 393 aaPredicted RBP10.64□□□□□ -0.71
CHD7-206ENST00000527900 CHAF1AQ13111 956 aaPredicted RBP10.64□□□□□ -0.71
CHD7-206ENST00000527900 TNFAIP1Q13829 316 aa10.64□□□□□ -0.71
CHD7-206ENST00000527900 HHIPL2Q6UWX4 724 aa10.64□□□□□ -0.71
CHD7-206ENST00000527900 VPS37DQ86XT2 251 aa10.64□□□□□ -0.71
CHD7-206ENST00000527900 IFNL1Q8IU54 200 aa10.64□□□□□ -0.71
CHD7-206ENST00000527900 COPRSQ9NQ92 184 aa10.64□□□□□ -0.71
CHD7-206ENST00000527900 TCP10L2B9ZVM9 353 aa10.63□□□□□ -0.71
CHD7-206ENST00000527900 IGF2BP3O00425 579 aaKnown RBP eCLIP10.63□□□□□ -0.71
CHD7-206ENST00000527900 IREB2P48200 963 aaKnown RBP10.63□□□□□ -0.71
CHD7-206ENST00000527900 FKBP1CQ5VVH2 108 aa10.63□□□□□ -0.71
CHD7-206ENST00000527900 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.63□□□□□ -0.71
CHD7-206ENST00000527900 ANKRD13AQ8IZ07 590 aa10.63□□□□□ -0.71
CHD7-206ENST00000527900 TEKT1Q969V4 418 aa10.63□□□□□ -0.71
CHD7-206ENST00000527900 MS4A4AQ96JQ5 239 aa10.63□□□□□ -0.71
CHD7-206ENST00000527900 MEIS3Q99687 375 aa10.63□□□□□ -0.71
CHD7-206ENST00000527900 PTPN18Q99952 460 aa10.63□□□□□ -0.71
CHD7-206ENST00000527900 TMEM39BQ9GZU3 492 aa10.63□□□□□ -0.71
CHD7-206ENST00000527900 LRRFIP2Q9Y608 721 aaKnown RBP10.63□□□□□ -0.71
CHD7-206ENST00000527900 CENPFP49454 3210 aa10.62□□□□□ -0.71
CHD7-206ENST00000527900 ALDH1A1P00352 501 aa10.62□□□□□ -0.71
CHD7-206ENST00000527900 SLC5A1P13866 664 aa10.62□□□□□ -0.71
CHD7-206ENST00000527900 MTX1Q13505 466 aa10.62□□□□□ -0.71
CHD7-206ENST00000527900 PKN2Q16513 984 aaKnown RBP10.62□□□□□ -0.71
CHD7-206ENST00000527900 FAM83AQ86UY5 434 aa10.62□□□□□ -0.71
CHD7-206ENST00000527900 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.62□□□□□ -0.71
CHD7-206ENST00000527900 WDR66Q8TBY9 1149 aa10.62□□□□□ -0.71
CHD7-206ENST00000527900 PA2G4Q9UQ80 394 aaKnown RBP10.62□□□□□ -0.71
CHD7-206ENST00000527900 SALL1Q9NSC2 1324 aa10.61□□□□□ -0.71
CHD7-206ENST00000527900 FRAT2O75474 233 aaPredicted RBP10.61□□□□□ -0.71
CHD7-206ENST00000527900 IL15P40933 162 aaPredicted RBP10.61□□□□□ -0.71
CHD7-206ENST00000527900 TNNI2P48788 182 aa10.61□□□□□ -0.71
CHD7-206ENST00000527900 CACNB3P54284 484 aa10.61□□□□□ -0.71
CHD7-206ENST00000527900 MLLT1Q03111 559 aaPredicted RBP10.61□□□□□ -0.71
CHD7-206ENST00000527900 ATP2B3Q16720 1220 aa10.61□□□□□ -0.71
CHD7-206ENST00000527900 SIL1Q9H173 461 aa10.61□□□□□ -0.71
CHD7-206ENST00000527900 CEP126Q9P2H0 1117 aa10.61□□□□□ -0.71
CHD7-206ENST00000527900 HDAC5Q9UQL6 1122 aa10.61□□□□□ -0.71
CHD7-206ENST00000527900 TNNQ9UQP3 1299 aa10.61□□□□□ -0.71
CHD7-206ENST00000527900 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.61□□□□□ -0.71
CHD7-206ENST00000527900 MAST3O60307 1309 aa10.6□□□□□ -0.71
CHD7-206ENST00000527900 FKTNO75072 461 aa10.6□□□□□ -0.71
CHD7-206ENST00000527900 BCAR3O75815 825 aa10.6□□□□□ -0.71
CHD7-206ENST00000527900 TRIM27P14373 513 aa10.6□□□□□ -0.71
CHD7-206ENST00000527900 PHKA1P46020 1223 aa10.6□□□□□ -0.71
CHD7-206ENST00000527900 MAP3K9P80192 1104 aa10.6□□□□□ -0.71
CHD7-206ENST00000527900 VGLL4Q14135 290 aa10.6□□□□□ -0.71
CHD7-206ENST00000527900 OPTNQ96CV9 577 aa10.6□□□□□ -0.71
CHD7-206ENST00000527900 ELP3Q9H9T3 547 aa10.6□□□□□ -0.71
CHD7-206ENST00000527900 HPS5Q9UPZ3 1129 aa10.6□□□□□ -0.71
CHD7-206ENST00000527900 SEMA3EO15041 775 aa10.59□□□□□ -0.71
CHD7-206ENST00000527900 GNAI3P08754 354 aa10.59□□□□□ -0.71
CHD7-206ENST00000527900 PRDX5P30044 214 aa10.59□□□□□ -0.71
CHD7-206ENST00000527900 ADORA1P30542 326 aa10.59□□□□□ -0.71
CHD7-206ENST00000527900 TIMM10P62072 90 aa10.59□□□□□ -0.71
CHD7-206ENST00000527900 CAP1Q01518 475 aa10.59□□□□□ -0.71
CHD7-206ENST00000527900 CCDC102BQ68D86 513 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms