RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 HUNKP57058 714 aa15.5■□□□□ 0.07
SSSCA1-203ENST00000526877 FKBP1AP62942 108 aaKnown RBP15.5■□□□□ 0.07
SSSCA1-203ENST00000526877 AACSQ86V21 672 aa15.5■□□□□ 0.07
SSSCA1-203ENST00000526877 C2orf69Q8N8R5 385 aa15.5■□□□□ 0.07
SSSCA1-203ENST00000526877 GPR108Q9NPR9 543 aa15.5■□□□□ 0.07
SSSCA1-203ENST00000526877 FAM205AQ6ZU69 1335 aa15.49■□□□□ 0.07
SSSCA1-203ENST00000526877 CTCFP49711 727 aaPredicted RBP15.49■□□□□ 0.07
SSSCA1-203ENST00000526877 METTL24Q5JXM2 366 aa15.49■□□□□ 0.07
SSSCA1-203ENST00000526877 MTMR14Q8NCE2 650 aa15.49■□□□□ 0.07
SSSCA1-203ENST00000526877 AIDAQ96BJ3 306 aa15.49■□□□□ 0.07
SSSCA1-203ENST00000526877 GPATCH3Q96I76 525 aa15.49■□□□□ 0.07
SSSCA1-203ENST00000526877 ZIC5Q96T25 663 aa15.49■□□□□ 0.07
SSSCA1-203ENST00000526877 PRDM10Q9NQV6 1147 aa15.49■□□□□ 0.07
SSSCA1-203ENST00000526877 HDAC9Q9UKV0 1011 aa15.49■□□□□ 0.07
SSSCA1-203ENST00000526877 AKAP2Q9Y2D5 859 aa15.49■□□□□ 0.07
SSSCA1-203ENST00000526877 FAM155AB1AL88 458 aaPredicted RBP15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 PDE8BO95263 885 aa15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 HSPA8P11142 646 aaKnown RBP15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 MX1P20591 662 aa15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 HIBADHP31937 336 aaKnown RBP15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 TNNI3KQ59H18 835 aa15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 PRAMEF18Q5VWM3 479 aa15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 RGMBQ6NW40 437 aa15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 FBXO33Q7Z6M2 555 aa15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 OTUD7AQ8TE49 926 aaPredicted RBP15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 OSBPL3Q9H4L5 887 aa15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 PCDHAC2Q9Y5I4 1007 aa15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 FPGT-TNNI3KV9GXZ4 949 aa15.48■□□□□ 0.07
SSSCA1-203ENST00000526877 FGFR2P21802 821 aa15.47■□□□□ 0.07
SSSCA1-203ENST00000526877 LBX1P52954 281 aa15.47■□□□□ 0.07
SSSCA1-203ENST00000526877 PDE1AP54750 535 aa15.47■□□□□ 0.07
SSSCA1-203ENST00000526877 EAF2Q96CJ1 260 aaPredicted RBP15.47■□□□□ 0.07
SSSCA1-203ENST00000526877 STAP2Q9UGK3 403 aa15.47■□□□□ 0.07
SSSCA1-203ENST00000526877 JAG2Q9Y219 1238 aa15.47■□□□□ 0.07
SSSCA1-203ENST00000526877 AOX1Q06278 1338 aa15.46■□□□□ 0.07
SSSCA1-203ENST00000526877 FKBP1BP68106 108 aa15.46■□□□□ 0.07
SSSCA1-203ENST00000526877 TNS4Q8IZW8 715 aa15.46■□□□□ 0.07
SSSCA1-203ENST00000526877 CCDC8Q9H0W5 538 aaPredicted RBP15.46■□□□□ 0.07
SSSCA1-203ENST00000526877 TTC41PQ6P2S7 1318 aa15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 SALL3Q9BXA9 1300 aa15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 ECM29Q5VYK3 1845 aa15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 F8W031 263 aaPredicted RBP15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 ERC2O15083 957 aa15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 NOGQ13253 232 aa15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 DLGAP5Q15398 846 aa15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 TTC22Q5TAA0 569 aa15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 MOB2Q70IA6 237 aa15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 CCDC102AQ96A19 550 aa15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 PRMT6Q96LA8 375 aaPredicted RBP15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 NEUROD6Q96NK8 337 aa15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.45■□□□□ 0.06
SSSCA1-203ENST00000526877 PAPPA2Q9BXP8 1791 aa15.44■□□□□ 0.06
SSSCA1-203ENST00000526877 BCAMP50895 628 aa15.44■□□□□ 0.06
SSSCA1-203ENST00000526877 ZNF157P51786 506 aaPredicted RBP15.44■□□□□ 0.06
SSSCA1-203ENST00000526877 ATP2B3Q16720 1220 aa15.44■□□□□ 0.06
SSSCA1-203ENST00000526877 CFAP100Q494V2 611 aa15.44■□□□□ 0.06
SSSCA1-203ENST00000526877 BMP2KLQ5H9B9 411 aa15.44■□□□□ 0.06
SSSCA1-203ENST00000526877 ECHDC1Q9NTX5 307 aa15.44■□□□□ 0.06
SSSCA1-203ENST00000526877 A0A1B0GUL7 405 aa15.43■□□□□ 0.06
SSSCA1-203ENST00000526877 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
SSSCA1-203ENST00000526877 GLRX3O76003 335 aaKnown RBP15.43■□□□□ 0.06
SSSCA1-203ENST00000526877 SLC10A3P09131 477 aa15.43■□□□□ 0.06
SSSCA1-203ENST00000526877 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
SSSCA1-203ENST00000526877 TIMM10P62072 90 aa15.43■□□□□ 0.06
SSSCA1-203ENST00000526877 PUM3Q15397 648 aaKnown RBP15.43■□□□□ 0.06
SSSCA1-203ENST00000526877 GRIK5Q16478 980 aa15.43■□□□□ 0.06
SSSCA1-203ENST00000526877 MFSD14BQ5SR56 506 aa15.43■□□□□ 0.06
SSSCA1-203ENST00000526877 APOBEC3FQ8IUX4 373 aaKnown RBP15.43■□□□□ 0.06
SSSCA1-203ENST00000526877 IQSEC3Q9UPP2 1182 aaPredicted RBP15.43■□□□□ 0.06
SSSCA1-203ENST00000526877 UBE2Q2LH0YL09 131 aa15.42■□□□□ 0.06
SSSCA1-203ENST00000526877 KIF23Q02241 960 aaPredicted RBP15.42■□□□□ 0.06
SSSCA1-203ENST00000526877 CAVIN4Q5BKX8 364 aa15.42■□□□□ 0.06
SSSCA1-203ENST00000526877 GORABQ5T7V8 394 aa15.42■□□□□ 0.06
SSSCA1-203ENST00000526877 LPIN2Q92539 896 aa15.42■□□□□ 0.06
SSSCA1-203ENST00000526877 BEGAINQ9BUH8 593 aa15.42■□□□□ 0.06
SSSCA1-203ENST00000526877 DEFB129Q9H1M3 183 aa15.42■□□□□ 0.06
SSSCA1-203ENST00000526877 DBNLQ9UJU6 430 aaKnown RBP15.42■□□□□ 0.06
SSSCA1-203ENST00000526877 ARAP2Q8WZ64 1704 aa15.42■□□□□ 0.06
SSSCA1-203ENST00000526877 AK9Q5TCS8 1911 aa15.41■□□□□ 0.06
SSSCA1-203ENST00000526877 SLC5A1P13866 664 aa15.41■□□□□ 0.06
SSSCA1-203ENST00000526877 CCDC158Q5M9N0 1113 aa15.41■□□□□ 0.06
SSSCA1-203ENST00000526877 VPS37DQ86XT2 251 aa15.41■□□□□ 0.06
SSSCA1-203ENST00000526877 DBNDD2Q9BQY9 259 aa15.41■□□□□ 0.06
SSSCA1-203ENST00000526877 TLR7Q9NYK1 1049 aaKnown RBP15.41■□□□□ 0.06
SSSCA1-203ENST00000526877 TSKSQ9UJT2 592 aa15.41■□□□□ 0.06
SSSCA1-203ENST00000526877 SERPINA10Q9UK55 444 aa15.41■□□□□ 0.06
SSSCA1-203ENST00000526877 TTF2Q9UNY4 1162 aaKnown RBP15.41■□□□□ 0.06
SSSCA1-203ENST00000526877 CLRN2A0PK11 232 aa15.4■□□□□ 0.06
SSSCA1-203ENST00000526877 CA12O43570 354 aa15.4■□□□□ 0.06
SSSCA1-203ENST00000526877 IFIT1P09914 478 aaKnown RBP15.4■□□□□ 0.06
SSSCA1-203ENST00000526877 TSHZ3Q63HK5 1081 aa15.4■□□□□ 0.06
SSSCA1-203ENST00000526877 RASAL3Q86YV0 1011 aa15.4■□□□□ 0.06
SSSCA1-203ENST00000526877 PI4K2BQ8TCG2 481 aa15.4■□□□□ 0.06
SSSCA1-203ENST00000526877 XAGE2Q96GT9 111 aa15.4■□□□□ 0.06
SSSCA1-203ENST00000526877 CSRNP1Q96S65 589 aa15.4■□□□□ 0.06
SSSCA1-203ENST00000526877 CASP8AP2Q9UKL3 1982 aa15.4■□□□□ 0.06
SSSCA1-203ENST00000526877 TRIM6-TRIM34B2RNG4 842 aa15.39■□□□□ 0.05
SSSCA1-203ENST00000526877 GSPT1P15170 499 aaKnown RBP15.39■□□□□ 0.05
SSSCA1-203ENST00000526877 ATP5JP18859 108 aa15.39■□□□□ 0.05
SSSCA1-203ENST00000526877 CHAF1AQ13111 956 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms