RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 PTCD1O75127 700 aaKnown RBP8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 PPP2R1AP30153 589 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 IDH3AP50213 366 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 CCINQ13939 588 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 GRIN2CQ14957 1233 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 PNISRQ8TF01 805 aaKnown RBP8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 STK32AQ8WU08 396 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 NUDT16Q96DE0 195 aaKnown RBP8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 DCAF5Q96JK2 942 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 QTRT2Q9H974 415 aaKnown RBP8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 C11orf16Q9NQ32 467 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 TERF2IPQ9NYB0 399 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 PPIP5K1Q6PFW1 1433 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 TOPAZ1Q8N9V7 1692 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 CGNL1Q0VF96 1302 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 CDC42BPGQ6DT37 1551 aa8.27□□□□□ -1.09
ATPAF1-208ENST00000526821 CENPBP07199 599 aaPredicted RBP8.26□□□□□ -1.09
ATPAF1-208ENST00000526821 ARID4AP29374 1257 aaPredicted RBP8.26□□□□□ -1.09
ATPAF1-208ENST00000526821 ADH7P40394 386 aa8.26□□□□□ -1.09
ATPAF1-208ENST00000526821 TBC1D8BQ0IIM8 1120 aa8.26□□□□□ -1.09
ATPAF1-208ENST00000526821 FKBP5Q13451 457 aaPredicted RBP8.26□□□□□ -1.09
ATPAF1-208ENST00000526821 CNGB1Q14028 1251 aaPredicted RBP8.26□□□□□ -1.09
ATPAF1-208ENST00000526821 PCSK7Q16549 785 aa8.26□□□□□ -1.09
ATPAF1-208ENST00000526821 GPAT2Q6NUI2 795 aa8.26□□□□□ -1.09
ATPAF1-208ENST00000526821 RAB44Q7Z6P3 723 aaPredicted RBP8.26□□□□□ -1.09
ATPAF1-208ENST00000526821 COL26A1Q96A83 441 aa8.26□□□□□ -1.09
ATPAF1-208ENST00000526821 UBE2OQ9C0C9 1292 aaKnown RBP8.26□□□□□ -1.09
ATPAF1-208ENST00000526821 INSRP06213 1382 aa8.25□□□□□ -1.09
ATPAF1-208ENST00000526821 MICAL2O94851 1124 aa8.25□□□□□ -1.09
ATPAF1-208ENST00000526821 LINC00114Q6XXX2 140 aa8.25□□□□□ -1.09
ATPAF1-208ENST00000526821 HDGFL2Q7Z4V5 671 aaPredicted RBP8.25□□□□□ -1.09
ATPAF1-208ENST00000526821 IFT43Q96FT9 208 aa8.25□□□□□ -1.09
ATPAF1-208ENST00000526821 IGFLR1Q9H665 355 aa8.25□□□□□ -1.09
ATPAF1-208ENST00000526821 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.25□□□□□ -1.09
ATPAF1-208ENST00000526821 ANKARQ7Z5J8 1434 aa8.25□□□□□ -1.09
ATPAF1-208ENST00000526821 NKTRP30414 1462 aaKnown RBP8.25□□□□□ -1.09
ATPAF1-208ENST00000526821 EDC4Q6P2E9 1401 aaKnown RBP8.24□□□□□ -1.09
ATPAF1-208ENST00000526821 ADGRL3Q9HAR2 1447 aa8.24□□□□□ -1.09
ATPAF1-208ENST00000526821 FYB1O15117 783 aa8.24□□□□□ -1.09
ATPAF1-208ENST00000526821 BRD2P25440 801 aaKnown RBP8.24□□□□□ -1.09
ATPAF1-208ENST00000526821 TMEM164Q5U3C3 297 aa8.24□□□□□ -1.09
ATPAF1-208ENST00000526821 C16orf46Q6P387 395 aa8.24□□□□□ -1.09
ATPAF1-208ENST00000526821 CCDC82Q8N4S0 544 aa8.24□□□□□ -1.09
ATPAF1-208ENST00000526821 CLP1Q92989 425 aaKnown RBP8.24□□□□□ -1.09
ATPAF1-208ENST00000526821 CXXC1Q9P0U4 656 aaPredicted RBP8.24□□□□□ -1.09
ATPAF1-208ENST00000526821 DMGDHQ9UI17 866 aaKnown RBP8.24□□□□□ -1.09
ATPAF1-208ENST00000526821 BCS1LQ9Y276 419 aa8.24□□□□□ -1.09
ATPAF1-208ENST00000526821 MON2Q7Z3U7 1717 aa8.23□□□□□ -1.09
ATPAF1-208ENST00000526821 NALCNQ8IZF0 1738 aa8.23□□□□□ -1.09
ATPAF1-208ENST00000526821 FMN2Q9NZ56 1722 aa8.23□□□□□ -1.09
ATPAF1-208ENST00000526821 AKAP12Q02952 1782 aa8.23□□□□□ -1.09
ATPAF1-208ENST00000526821 SSH2Q76I76 1423 aa8.23□□□□□ -1.09
ATPAF1-208ENST00000526821 INPP5BP32019 993 aa8.23□□□□□ -1.09
ATPAF1-208ENST00000526821 HSPA2P54652 639 aa8.23□□□□□ -1.09
ATPAF1-208ENST00000526821 GSX2Q9BZM3 304 aa8.23□□□□□ -1.09
ATPAF1-208ENST00000526821 FAM13BQ9NYF5 915 aa8.23□□□□□ -1.09
ATPAF1-208ENST00000526821 POLR3AO14802 1390 aaPredicted RBP8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 STRCQ7RTU9 1775 aa8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 M0R082 166 aa8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 MSTNO14793 375 aa8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 HOXB4P17483 251 aaPredicted RBP8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 NFKB1P19838 968 aa8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 OCLNQ16625 522 aa8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 PRRT3Q5FWE3 981 aa8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 MORC1Q86VD1 984 aa8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 TREML1Q86YW5 311 aa8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 FAM9BQ8IZU0 186 aa8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 ZNF417Q8TAU3 575 aa8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 ZNF587Q96SQ5 575 aaPredicted RBP8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 ANKRD26Q9UPS8 1709 aa8.22□□□□□ -1.09
ATPAF1-208ENST00000526821 NCOA3Q9Y6Q9 1424 aa8.21□□□□□ -1.09
ATPAF1-208ENST00000526821 ITSN1Q15811 1721 aa8.21□□□□□ -1.09
ATPAF1-208ENST00000526821 PLA2G4EQ3MJ16 856 aa8.21□□□□□ -1.1
ATPAF1-208ENST00000526821 COX20Q5RI15 118 aa8.21□□□□□ -1.1
ATPAF1-208ENST00000526821 MKNK1Q9BUB5 465 aa8.21□□□□□ -1.1
ATPAF1-208ENST00000526821 PRDM6Q9NQX0 595 aa8.21□□□□□ -1.1
ATPAF1-208ENST00000526821 NRKQ7Z2Y5 1582 aa8.21□□□□□ -1.1
ATPAF1-208ENST00000526821 ACEP12821 1306 aa8.21□□□□□ -1.1
ATPAF1-208ENST00000526821 USP6P35125 1406 aa8.2□□□□□ -1.1
ATPAF1-208ENST00000526821 STRCP1A6NGW2 1772 aa8.2□□□□□ -1.1
ATPAF1-208ENST00000526821 KIF20BQ96Q89 1820 aa8.2□□□□□ -1.1
ATPAF1-208ENST00000526821 LILRB5O75023 590 aa8.2□□□□□ -1.1
ATPAF1-208ENST00000526821 ATP2B4P23634 1241 aa8.2□□□□□ -1.1
ATPAF1-208ENST00000526821 MDFIQ99750 246 aa8.2□□□□□ -1.1
ATPAF1-208ENST00000526821 PLVAPQ9BX97 442 aa8.2□□□□□ -1.1
ATPAF1-208ENST00000526821 GGNBP2Q9H3C7 697 aa8.2□□□□□ -1.1
ATPAF1-208ENST00000526821 SUV39H2Q9H5I1 410 aa8.2□□□□□ -1.1
ATPAF1-208ENST00000526821 LRFN2Q9ULH4 789 aa8.2□□□□□ -1.1
ATPAF1-208ENST00000526821 BLMP54132 1417 aaPredicted RBP8.2□□□□□ -1.1
ATPAF1-208ENST00000526821 MAP3K6O95382 1288 aa8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 RARAP10276 462 aa8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 HNRNPUQ00839 825 aaKnown RBP eCLIP8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 KRT25Q7Z3Z0 450 aa8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 RGL4Q8IZJ4 473 aa8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 CMTR1Q8N1G2 835 aaKnown RBP8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 MICALL1Q8N3F8 863 aa8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 ABTB2Q8N961 1025 aa8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 DNAJB12Q9NXW2 375 aaKnown RBP8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 SLC6A14Q9UN76 642 aa8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 RTCBQ9Y3I0 505 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms