RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 DNAJC10Q8IXB1 793 aa9.13□□□□□ -0.95
CTR9-202ENST00000524523 KIF2CQ99661 725 aa9.13□□□□□ -0.95
CTR9-202ENST00000524523 SNRKQ9NRH2 765 aa9.13□□□□□ -0.95
CTR9-202ENST00000524523 APBB1O00213 710 aa9.12□□□□□ -0.95
CTR9-202ENST00000524523 ATP5JP18859 108 aa9.12□□□□□ -0.95
CTR9-202ENST00000524523 EIF5P55010 431 aaKnown RBP9.12□□□□□ -0.95
CTR9-202ENST00000524523 TMEM259Q4ZIN3 620 aa9.12□□□□□ -0.95
CTR9-202ENST00000524523 CLEC4GQ6UXB4 293 aa9.12□□□□□ -0.95
CTR9-202ENST00000524523 MARCH10Q8NA82 808 aaPredicted RBP9.12□□□□□ -0.95
CTR9-202ENST00000524523 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.12□□□□□ -0.95
CTR9-202ENST00000524523 LRRN4Q8WUT4 740 aa9.12□□□□□ -0.95
CTR9-202ENST00000524523 NGLY1Q96IV0 654 aa9.12□□□□□ -0.95
CTR9-202ENST00000524523 IL1RAPL2Q9NP60 686 aa9.12□□□□□ -0.95
CTR9-202ENST00000524523 CICQ96RK0 1608 aaPredicted RBP9.12□□□□□ -0.95
CTR9-202ENST00000524523 RFX7Q2KHR2 1363 aa9.12□□□□□ -0.95
CTR9-202ENST00000524523 NRAPQ86VF7 1730 aa9.11□□□□□ -0.95
CTR9-202ENST00000524523 BCL9LQ86UU0 1499 aa9.11□□□□□ -0.95
CTR9-202ENST00000524523 PIP4K2BP78356 416 aa9.11□□□□□ -0.95
CTR9-202ENST00000524523 PARP10Q53GL7 1025 aa9.11□□□□□ -0.95
CTR9-202ENST00000524523 LMBR1LQ6UX01 489 aa9.11□□□□□ -0.95
CTR9-202ENST00000524523 ANTXR1Q9H6X2 564 aa9.11□□□□□ -0.95
CTR9-202ENST00000524523 CCDC87Q9NVE4 849 aa9.11□□□□□ -0.95
CTR9-202ENST00000524523 AKAP2Q9Y2D5 859 aa9.11□□□□□ -0.95
CTR9-202ENST00000524523 ZNF831Q5JPB2 1677 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 RAD50Q92878 1312 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 LOC102724428A0A0B4J2F2 783 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 ATP5J2-PTCD1G3V325 749 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 SGSM2O43147 1006 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 VARSP26640 1264 aaKnown RBP9.1□□□□□ -0.95
CTR9-202ENST00000524523 SIK1P57059 783 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 AGERQ15109 404 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 LRRFIP1Q32MZ4 808 aaKnown RBP9.1□□□□□ -0.95
CTR9-202ENST00000524523 EPHA10Q5JZY3 1008 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 AACSQ86V21 672 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 ZNF34Q8IZ26 560 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 RILPL2Q969X0 211 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 EAF2Q96CJ1 260 aaPredicted RBP9.1□□□□□ -0.95
CTR9-202ENST00000524523 SLC4A9Q96Q91 983 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 CWC22Q9HCG8 908 aaKnown RBP9.1□□□□□ -0.95
CTR9-202ENST00000524523 CHMP5Q9NZZ3 219 aa9.1□□□□□ -0.95
CTR9-202ENST00000524523 TOGARAM1Q9Y4F4 1720 aa9.09□□□□□ -0.95
CTR9-202ENST00000524523 K7ELQ4 463 aaPredicted RBP9.09□□□□□ -0.95
CTR9-202ENST00000524523 EYA2O00167 538 aa9.09□□□□□ -0.95
CTR9-202ENST00000524523 USP17L8P0C7I0 530 aa9.09□□□□□ -0.95
CTR9-202ENST00000524523 CCDC57Q2TAC2 916 aa9.09□□□□□ -0.95
CTR9-202ENST00000524523 TNNI3KQ59H18 835 aa9.09□□□□□ -0.95
CTR9-202ENST00000524523 INTS5Q6P9B9 1019 aaKnown RBP9.09□□□□□ -0.95
CTR9-202ENST00000524523 KIAA1211Q6ZU35 1233 aa9.09□□□□□ -0.95
CTR9-202ENST00000524523 NLRP10Q86W26 655 aa9.09□□□□□ -0.95
CTR9-202ENST00000524523 PA2G4Q9UQ80 394 aaKnown RBP9.09□□□□□ -0.95
CTR9-202ENST00000524523 FPGT-TNNI3KV9GXZ4 949 aa9.09□□□□□ -0.95
CTR9-202ENST00000524523 ABCC12Q96J65 1359 aa9.09□□□□□ -0.95
CTR9-202ENST00000524523 WNK3Q9BYP7 1800 aa9.08□□□□□ -0.96
CTR9-202ENST00000524523 ALDH1A1P00352 501 aa9.08□□□□□ -0.96
CTR9-202ENST00000524523 PDIA4P13667 645 aaKnown RBP9.08□□□□□ -0.96
CTR9-202ENST00000524523 DDIT3P35638 169 aa9.08□□□□□ -0.96
CTR9-202ENST00000524523 ATG9AQ7Z3C6 839 aa9.08□□□□□ -0.96
CTR9-202ENST00000524523 BPHLQ86WA6 291 aaPredicted RBP9.08□□□□□ -0.96
CTR9-202ENST00000524523 DZIP3Q86Y13 1208 aaKnown RBP9.08□□□□□ -0.96
CTR9-202ENST00000524523 PNMA1Q8ND90 353 aa9.08□□□□□ -0.96
CTR9-202ENST00000524523 GPKOWQ92917 476 aaPredicted RBP eCLIP9.08□□□□□ -0.96
CTR9-202ENST00000524523 KCNB2Q92953 911 aa9.08□□□□□ -0.96
CTR9-202ENST00000524523 SYTL4Q96C24 671 aaPredicted RBP9.08□□□□□ -0.96
CTR9-202ENST00000524523 ZNF512BQ96KM6 892 aaPredicted RBP9.08□□□□□ -0.96
CTR9-202ENST00000524523 CEP126Q9P2H0 1117 aa9.08□□□□□ -0.96
CTR9-202ENST00000524523 ZNF652Q9Y2D9 606 aa9.08□□□□□ -0.96
CTR9-202ENST00000524523 CCDC9Q9Y3X0 531 aaKnown RBP9.08□□□□□ -0.96
CTR9-202ENST00000524523 ARFGEF2Q9Y6D5 1785 aa9.08□□□□□ -0.96
CTR9-202ENST00000524523 SIAH2O43255 324 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 PDE8AO60658 829 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 PTMSP20962 102 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 HSPA4P34932 840 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 CRKLP46109 303 aaKnown RBP9.07□□□□□ -0.96
CTR9-202ENST00000524523 PIP4K2AP48426 406 aaPredicted RBP9.07□□□□□ -0.96
CTR9-202ENST00000524523 IFIT5Q13325 482 aaKnown RBP9.07□□□□□ -0.96
CTR9-202ENST00000524523 NR6A1Q15406 480 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 FAM174AQ8TBP5 190 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 FOXJ1Q92949 421 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 HAUS7Q99871 368 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 TM6SF1Q9BZW5 370 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 DIAPH3Q9NSV4 1193 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 FKBPLQ9UIM3 349 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 USP21Q9UK80 565 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 RTL9Q8NET4 1388 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 PALLDQ8WX93 1383 aa9.07□□□□□ -0.96
CTR9-202ENST00000524523 CNTNAP4Q9C0A0 1308 aa9.06□□□□□ -0.96
CTR9-202ENST00000524523 NUP188Q5SRE5 1749 aa9.06□□□□□ -0.96
CTR9-202ENST00000524523 ITGB4P16144 1822 aa9.06□□□□□ -0.96
CTR9-202ENST00000524523 J3QL48 77 aa9.06□□□□□ -0.96
CTR9-202ENST00000524523 SMPD1P17405 629 aa9.06□□□□□ -0.96
CTR9-202ENST00000524523 TFCP2Q12800 502 aa9.06□□□□□ -0.96
CTR9-202ENST00000524523 TSGA10IPQ3SY00 556 aa9.06□□□□□ -0.96
CTR9-202ENST00000524523 CLEC17AQ6ZS10 378 aa9.06□□□□□ -0.96
CTR9-202ENST00000524523 TTLL11Q8NHH1 800 aa9.06□□□□□ -0.96
CTR9-202ENST00000524523 INTS4Q96HW7 963 aaKnown RBP9.06□□□□□ -0.96
CTR9-202ENST00000524523 GJD4Q96KN9 370 aaPredicted RBP9.06□□□□□ -0.96
CTR9-202ENST00000524523 ZBTB1Q9Y2K1 713 aa9.06□□□□□ -0.96
CTR9-202ENST00000524523 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.05□□□□□ -0.96
CTR9-202ENST00000524523 ANKRD18BA2A2Z9 1011 aa9.05□□□□□ -0.96
CTR9-202ENST00000524523 CTSWP56202 376 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms