RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 MKRN3Q13064 507 aaKnown RBP11.05□□□□□ -0.64
CTNNA1-240ENST00000523912 LDLRAD1Q5T700 205 aa11.05□□□□□ -0.64
CTNNA1-240ENST00000523912 VGLL2Q8N8G2 317 aa11.05□□□□□ -0.64
CTNNA1-240ENST00000523912 LPIN2Q92539 896 aa11.05□□□□□ -0.64
CTNNA1-240ENST00000523912 TEKT1Q969V4 418 aa11.05□□□□□ -0.64
CTNNA1-240ENST00000523912 SLC10A4Q96EP9 437 aa11.05□□□□□ -0.64
CTNNA1-240ENST00000523912 PRMT6Q96LA8 375 aaPredicted RBP11.05□□□□□ -0.64
CTNNA1-240ENST00000523912 ZNF70Q9UC06 446 aaPredicted RBP11.05□□□□□ -0.64
CTNNA1-240ENST00000523912 A0A1B0GUL6 1792 aa11.05□□□□□ -0.64
CTNNA1-240ENST00000523912 ZNF646O15015 1829 aaPredicted RBP11.05□□□□□ -0.64
CTNNA1-240ENST00000523912 MANSC4A6NHS7 340 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 FKTNO75072 461 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 CIAO1O76071 339 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 TBC1D8O95759 1140 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 HDLBPQ00341 1268 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 RASA3Q14644 834 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 MAP3K11Q16584 847 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 SPRYD7Q5W111 196 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 DZIP1LQ8IYY4 767 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 KLHDC4Q8TBB5 520 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 ARHGAP45Q92619 1136 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 GCC1Q96CN9 775 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 HOOK2Q96ED9 719 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 CEP126Q9P2H0 1117 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 IQSEC3Q9UPP2 1182 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 PCDHAC2Q9Y5I4 1007 aa11.04□□□□□ -0.64
CTNNA1-240ENST00000523912 GNAI3P08754 354 aa11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 IL15P40933 162 aaPredicted RBP11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 BCAMP50895 628 aa11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 RARSP54136 660 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 ATP2B3Q16720 1220 aa11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 INTS3Q68E01 1043 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 OTUD7BQ6GQQ9 843 aa11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 ANKRD13AQ8IZ07 590 aa11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 WDR66Q8TBY9 1149 aa11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 SIL1Q9H173 461 aa11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 TDRD3Q9H7E2 651 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-240ENST00000523912 TCP10L2B9ZVM9 353 aa11.02□□□□□ -0.65
CTNNA1-240ENST00000523912 FGFR2P21802 821 aa11.02□□□□□ -0.65
CTNNA1-240ENST00000523912 RFX5P48382 616 aaPredicted RBP11.02□□□□□ -0.65
CTNNA1-240ENST00000523912 NBPF12Q5TAG4 269 aaPredicted RBP11.02□□□□□ -0.65
CTNNA1-240ENST00000523912 WNK4Q96J92 1243 aa11.02□□□□□ -0.65
CTNNA1-240ENST00000523912 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.02□□□□□ -0.65
CTNNA1-240ENST00000523912 SSC5DA1L4H1 1573 aa11.02□□□□□ -0.65
CTNNA1-240ENST00000523912 SEMA3EO15041 775 aa11.01□□□□□ -0.65
CTNNA1-240ENST00000523912 ZDHHC15Q96MV8 337 aa11.01□□□□□ -0.65
CTNNA1-240ENST00000523912 MRIQ9BWK5 157 aa11.01□□□□□ -0.65
CTNNA1-240ENST00000523912 CSADQ9Y600 493 aa11.01□□□□□ -0.65
CTNNA1-240ENST00000523912 FKBP1CQ5VVH2 108 aa11□□□□□ -0.65
CTNNA1-240ENST00000523912 HHIPL2Q6UWX4 724 aa11□□□□□ -0.65
CTNNA1-240ENST00000523912 ATG9AQ7Z3C6 839 aa11□□□□□ -0.65
CTNNA1-240ENST00000523912 ZGPATQ8N5A5 531 aaKnown RBP11□□□□□ -0.65
CTNNA1-240ENST00000523912 CLMNQ96JQ2 1002 aa11□□□□□ -0.65
CTNNA1-240ENST00000523912 MEIS3Q99687 375 aa11□□□□□ -0.65
CTNNA1-240ENST00000523912 TMEM39BQ9GZU3 492 aa11□□□□□ -0.65
CTNNA1-240ENST00000523912 COPRSQ9NQ92 184 aa11□□□□□ -0.65
CTNNA1-240ENST00000523912 DENND2AQ9ULE3 1009 aa11□□□□□ -0.65
CTNNA1-240ENST00000523912 FZD1Q9UP38 647 aa11□□□□□ -0.65
CTNNA1-240ENST00000523912 AOX1Q06278 1338 aa11□□□□□ -0.65
CTNNA1-240ENST00000523912 ARAP2Q8WZ64 1704 aa11□□□□□ -0.65
CTNNA1-240ENST00000523912 SRGAP3O43295 1099 aa10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 USP2O75604 605 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 WDHD1O75717 1129 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 LDHBP07195 334 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 MAP3K9P80192 1104 aa10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 DCAF15Q66K64 600 aa10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 ATF7IPQ6VMQ6 1270 aa10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 FAM83AQ86UY5 434 aa10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 FRAT1Q92837 279 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 ELP3Q9H9T3 547 aa10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 AKAP2Q9Y2D5 859 aa10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 RPAP1Q9BWH6 1393 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-240ENST00000523912 LAMB1P07942 1786 aa10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 ECM29Q5VYK3 1845 aa10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 GNAI2P04899 355 aa10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 CACNB3P54284 484 aa10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 HNRNPUQ00839 825 aaKnown RBP eCLIP10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 MVPQ14764 893 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 GRIK5Q16478 980 aa10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 SLF2Q8IX21 1173 aa10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 OPTNQ96CV9 577 aa10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 ERO1AQ96HE7 468 aa10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 TEPSINQ96N21 525 aa10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 SALL1Q9NSC2 1324 aa10.98□□□□□ -0.65
CTNNA1-240ENST00000523912 TESPA1A2RU30 521 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 TRIM27P14373 513 aa10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 GTF2A2P52657 109 aa10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 MTX1Q13505 466 aa10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 VGLL4Q14135 290 aa10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 ZKSCAN2Q63HK3 967 aa10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 APOBEC3HQ6NTF7 200 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 DZIP1Q86YF9 867 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 FTSJ3Q8IY81 847 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 WRNIP1Q96S55 665 aa10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 R3HDMLQ9H3Y0 253 aa10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 PA2G4Q9UQ80 394 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 KIAA0100Q14667 2235 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-240ENST00000523912 PDS5AQ29RF7 1337 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms